EX570428

EST Overview
NameEX570428
Unique NameEX570428
TypeEST
OrganismPisum sativum (pea)
Sequence length385
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology
BLAST of EX570428 vs. TrEMBL
Match: B0LUQ7_PEA (Minichromosome maintenance 4 protein OS=Pisum sativum GN=MCM4 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.447e-23
Identity = 57/59 (96.61%), Postives = 59/59 (100.00%), Query Frame = 2
Query:    2 IIMEKMQIGGRSMRLLEILEELKNQSPGNEIHLNDLRNAVSTLASEGFLSMAGESVKRT 178
            II+EKMQIGGRSMRLLEILEELKNQSPGNEIHLNDLRNAVSTLASEGFLS+AGESVKRT
Sbjct:  776 IILEKMQIGGRSMRLLEILEELKNQSPGNEIHLNDLRNAVSTLASEGFLSVAGESVKRT 834          
BLAST of EX570428 vs. TrEMBL
Match: D7U5J9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024207001 PE=4 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.816e-16
Identity = 44/58 (75.86%), Postives = 52/58 (89.66%), Query Frame = 2
Query:    2 IIMEKMQIGGRSMRLLEILEELKNQSPGNEIHLNDLRNAVSTLASEGFLSMAGESVKR 175
            IIMEKMQ+GG SMRLLE+LEELK QS  +E HLNDLRNA++TLASEGF+S+ G+SVKR
Sbjct:  776 IIMEKMQLGGPSMRLLELLEELKKQSSCSEAHLNDLRNALATLASEGFVSVHGDSVKR 833          
BLAST of EX570428 vs. TrEMBL
Match: B9RHA7_RICCO (DNA replication licensing factor MCM4, putative OS=Ricinus communis GN=RCOM_1449150 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.231e-15
Identity = 41/58 (70.69%), Postives = 50/58 (86.21%), Query Frame = 2
Query:    2 IIMEKMQIGGRSMRLLEILEELKNQSPGNEIHLNDLRNAVSTLASEGFLSMAGESVKR 175
            IIMEK+Q+GG SMRLLEI+EELK Q+  NE+HL DLRNAV+ LASEGF+ + G+SVKR
Sbjct:  809 IIMEKLQLGGPSMRLLEIMEELKKQNTSNEVHLQDLRNAVANLASEGFVVVHGDSVKR 866          
BLAST of EX570428 vs. TrEMBL
Match: D7L1V9_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_674705 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.830e-11
Identity = 39/61 (63.93%), Postives = 48/61 (78.69%), Query Frame = 2
Query:    2 IIMEKMQIGGRSMRLLEILEELKNQSPGN---EIHLNDLRNAVSTLASEGFLSMAGESVKR 175
            I +EKMQIGG SMRL E+LEELK    GN   EIHL+D+R AV+TLASEGFL++ G+ +KR
Sbjct:  787 IALEKMQIGGSSMRLSELLEELKKHG-GNINTEIHLHDVRKAVATLASEGFLAVEGDRIKR 846          
BLAST of EX570428 vs. TrEMBL
Match: Q0WVF5_ARATH (Putative CDC21 protein OS=Arabidopsis thaliana GN=At2g16440 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.075e-10
Identity = 39/61 (63.93%), Postives = 46/61 (75.41%), Query Frame = 2
Query:    2 IIMEKMQIGGRSMRLLEILEELKNQSPGN---EIHLNDLRNAVSTLASEGFLSMAGESVKR 175
            I +EKMQIGG SMRL E+LEELK    GN   EIHL+D+R AV+TLASEGFL   G+ +KR
Sbjct:  787 IALEKMQIGGSSMRLSELLEELKKHG-GNINTEIHLHDVRKAVATLASEGFLVAEGDRIKR 846          
BLAST of EX570428 vs. TrEMBL
Match: Q5JKB0_ORYSJ (Putative replication licensing factor MCM4 OS=Oryza sativa subsp. japonica GN=OSJNBa0051H17.26 PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.553e-9
Identity = 31/58 (53.45%), Postives = 47/58 (81.03%), Query Frame = 2
Query:    2 IIMEKMQIGGRSMRLLEILEELKNQSPGNEIHLNDLRNAVSTLASEGFLSMAGESVKR 175
            ++MEKMQ+GG S+R++E+LEE++ QS   E+HL+DLR A+ TL +EG + + G+SVKR
Sbjct:  805 LVMEKMQLGGPSVRMIELLEEIRKQS-SMEVHLHDLRGALGTLMTEGAVVIHGDSVKR 861          
BLAST of EX570428 vs. TrEMBL
Match: B9EXF2_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_02146 PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.553e-9
Identity = 31/58 (53.45%), Postives = 47/58 (81.03%), Query Frame = 2
Query:    2 IIMEKMQIGGRSMRLLEILEELKNQSPGNEIHLNDLRNAVSTLASEGFLSMAGESVKR 175
            ++MEKMQ+GG S+R++E+LEE++ QS   E+HL+DLR A+ TL +EG + + G+SVKR
Sbjct:  805 LVMEKMQLGGPSVRMIELLEEIRKQS-SMEVHLHDLRGALGTLMTEGAVVIHGDSVKR 861          
BLAST of EX570428 vs. TrEMBL
Match: B8A9Q9_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_02336 PE=4 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.553e-9
Identity = 31/58 (53.45%), Postives = 47/58 (81.03%), Query Frame = 2
Query:    2 IIMEKMQIGGRSMRLLEILEELKNQSPGNEIHLNDLRNAVSTLASEGFLSMAGESVKR 175
            ++MEKMQ+GG S+R++E+LEE++ QS   E+HL+DLR A+ TL +EG + + G+SVKR
Sbjct:  138 LVMEKMQLGGPSVRMIELLEEIRKQS-SMEVHLHDLRGALGTLMTEGAVVIHGDSVKR 194          
BLAST of EX570428 vs. TrEMBL
Match: C5XMX5_SORBI (Putative uncharacterized protein Sb03g024490 OS=Sorghum bicolor GN=Sb03g024490 PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 3.460e-9
Identity = 32/58 (55.17%), Postives = 47/58 (81.03%), Query Frame = 2
Query:    2 IIMEKMQIGGRSMRLLEILEELKNQSPGNEIHLNDLRNAVSTLASEGFLSMAGESVKR 175
            +I+EKMQ+GG SMR++E+LEEL+ QS   EIHL++LR A+ TL +EG + + G++VKR
Sbjct:  795 LIVEKMQLGGPSMRMIELLEELRKQS-SMEIHLHELRGALGTLMTEGAVVIHGDNVKR 851          
BLAST of EX570428 vs. TrEMBL
Match: C0PDH6_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 5.901e-9
Identity = 32/58 (55.17%), Postives = 46/58 (79.31%), Query Frame = 2
Query:    2 IIMEKMQIGGRSMRLLEILEELKNQSPGNEIHLNDLRNAVSTLASEGFLSMAGESVKR 175
            +I+EKMQ+GG SM ++E+LEEL+ QS   EIHL++LR A+ TL +EG + + GE+VKR
Sbjct:  794 LIVEKMQLGGPSMHMIELLEELRKQS-SMEIHLHELRGALGTLMTEGAVVIHGENVKR 850          
BLAST of EX570428 vs. TAIR peptide
Match: AT2G16440.1 (| Symbols: MCM4 | Minichromosome maintenance (MCM2/3/5) family protein | chr2:7126536-7130665 REVERSE LENGTH=847)

HSP 1 Score: 69.707 bits (169), Expect = 5.244e-13
Identity = 39/61 (63.93%), Postives = 46/61 (75.41%), Query Frame = 2
Query:    2 IIMEKMQIGGRSMRLLEILEELKNQSPGN---EIHLNDLRNAVSTLASEGFLSMAGESVKR 175
            I +EKMQIGG SMRL E+LEELK    GN   EIHL+D+R AV+TLASEGFL   G+ +KR
Sbjct:  787 IALEKMQIGGSSMRLSELLEELKKHG-GNINTEIHLHDVRKAVATLASEGFLVAEGDRIKR 846          
The following BLAST results are available for this feature:
BLAST of EX570428 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B0LUQ7_PEA1.447e-2396.61Minichromosome maintenance 4 protein OS=Pisum sati... [more]
D7U5J9_VITVI3.816e-1675.86Whole genome shotgun sequence of line PN40024, sca... [more]
B9RHA7_RICCO3.231e-1570.69DNA replication licensing factor MCM4, putative OS... [more]
D7L1V9_ARALY2.830e-1163.93Predicted protein OS=Arabidopsis lyrata subsp. lyr... [more]
Q0WVF5_ARATH1.075e-1063.93Putative CDC21 protein OS=Arabidopsis thaliana GN=... [more]
Q5JKB0_ORYSJ1.553e-953.45Putative replication licensing factor MCM4 OS=Oryz... [more]
B9EXF2_ORYSJ1.553e-953.45Putative uncharacterized protein OS=Oryza sativa s... [more]
B8A9Q9_ORYSI1.553e-953.45Putative uncharacterized protein OS=Oryza sativa s... [more]
C5XMX5_SORBI3.460e-955.17Putative uncharacterized protein Sb03g024490 OS=So... [more]
C0PDH6_MAIZE5.901e-955.17Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
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BLAST of EX570428 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G16440.15.244e-1363.93| Symbols: MCM4 | Minichromosome maintenance (MCM2... [more]
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Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX570428 ID=EX570428; Name=EX570428; organism=Pisum sativum; type=EST; length=385bp
CATAATAATGGAGAAGATGCAAATTGGGGGACGGTCTATGCGTTTATTGG
AGATATTGGAAGAATTGAAGAATCAGAGCCCTGGCAACGAAATTCATCTT
AATGATCTAAGGAATGCAGTTTCTACTCTTGCCAGCGAAGGATTTCTTTC
CATGGCCGGTGAGAGTGTAAAAAGAACATGATTCTACGAGGCAGGGTCAT
CATTGGGTTTATTGGACTGTGATATTACTTACCAGTACTACTAGCTAGTT
TCATGTATTAACTGCAACCATTTCCGGTGATGATACATGTACACATTATA
CACAGTAAATTAGAAATGTATCCCCCCGTTGGATCATTTGGTTTTTGAAA
GTCTGTCATTTGGTTTTCTTAAGGGCCCTTGTCAC
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