EX570428
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EX570428 vs. TrEMBL
Match: B0LUQ7_PEA (Minichromosome maintenance 4 protein OS=Pisum sativum GN=MCM4 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.447e-23 Identity = 57/59 (96.61%), Postives = 59/59 (100.00%), Query Frame = 2 Query: 2 IIMEKMQIGGRSMRLLEILEELKNQSPGNEIHLNDLRNAVSTLASEGFLSMAGESVKRT 178 II+EKMQIGGRSMRLLEILEELKNQSPGNEIHLNDLRNAVSTLASEGFLS+AGESVKRT Sbjct: 776 IILEKMQIGGRSMRLLEILEELKNQSPGNEIHLNDLRNAVSTLASEGFLSVAGESVKRT 834
BLAST of EX570428 vs. TrEMBL
Match: D7U5J9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024207001 PE=4 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.816e-16 Identity = 44/58 (75.86%), Postives = 52/58 (89.66%), Query Frame = 2 Query: 2 IIMEKMQIGGRSMRLLEILEELKNQSPGNEIHLNDLRNAVSTLASEGFLSMAGESVKR 175 IIMEKMQ+GG SMRLLE+LEELK QS +E HLNDLRNA++TLASEGF+S+ G+SVKR Sbjct: 776 IIMEKMQLGGPSMRLLELLEELKKQSSCSEAHLNDLRNALATLASEGFVSVHGDSVKR 833
BLAST of EX570428 vs. TrEMBL
Match: B9RHA7_RICCO (DNA replication licensing factor MCM4, putative OS=Ricinus communis GN=RCOM_1449150 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.231e-15 Identity = 41/58 (70.69%), Postives = 50/58 (86.21%), Query Frame = 2 Query: 2 IIMEKMQIGGRSMRLLEILEELKNQSPGNEIHLNDLRNAVSTLASEGFLSMAGESVKR 175 IIMEK+Q+GG SMRLLEI+EELK Q+ NE+HL DLRNAV+ LASEGF+ + G+SVKR Sbjct: 809 IIMEKLQLGGPSMRLLEIMEELKKQNTSNEVHLQDLRNAVANLASEGFVVVHGDSVKR 866
BLAST of EX570428 vs. TrEMBL
Match: D7L1V9_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_674705 PE=4 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.830e-11 Identity = 39/61 (63.93%), Postives = 48/61 (78.69%), Query Frame = 2 Query: 2 IIMEKMQIGGRSMRLLEILEELKNQSPGN---EIHLNDLRNAVSTLASEGFLSMAGESVKR 175 I +EKMQIGG SMRL E+LEELK GN EIHL+D+R AV+TLASEGFL++ G+ +KR Sbjct: 787 IALEKMQIGGSSMRLSELLEELKKHG-GNINTEIHLHDVRKAVATLASEGFLAVEGDRIKR 846
BLAST of EX570428 vs. TrEMBL
Match: Q0WVF5_ARATH (Putative CDC21 protein OS=Arabidopsis thaliana GN=At2g16440 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.075e-10 Identity = 39/61 (63.93%), Postives = 46/61 (75.41%), Query Frame = 2 Query: 2 IIMEKMQIGGRSMRLLEILEELKNQSPGN---EIHLNDLRNAVSTLASEGFLSMAGESVKR 175 I +EKMQIGG SMRL E+LEELK GN EIHL+D+R AV+TLASEGFL G+ +KR Sbjct: 787 IALEKMQIGGSSMRLSELLEELKKHG-GNINTEIHLHDVRKAVATLASEGFLVAEGDRIKR 846
BLAST of EX570428 vs. TrEMBL
Match: Q5JKB0_ORYSJ (Putative replication licensing factor MCM4 OS=Oryza sativa subsp. japonica GN=OSJNBa0051H17.26 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 1.553e-9 Identity = 31/58 (53.45%), Postives = 47/58 (81.03%), Query Frame = 2 Query: 2 IIMEKMQIGGRSMRLLEILEELKNQSPGNEIHLNDLRNAVSTLASEGFLSMAGESVKR 175 ++MEKMQ+GG S+R++E+LEE++ QS E+HL+DLR A+ TL +EG + + G+SVKR Sbjct: 805 LVMEKMQLGGPSVRMIELLEEIRKQS-SMEVHLHDLRGALGTLMTEGAVVIHGDSVKR 861
BLAST of EX570428 vs. TrEMBL
Match: B9EXF2_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_02146 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 1.553e-9 Identity = 31/58 (53.45%), Postives = 47/58 (81.03%), Query Frame = 2 Query: 2 IIMEKMQIGGRSMRLLEILEELKNQSPGNEIHLNDLRNAVSTLASEGFLSMAGESVKR 175 ++MEKMQ+GG S+R++E+LEE++ QS E+HL+DLR A+ TL +EG + + G+SVKR Sbjct: 805 LVMEKMQLGGPSVRMIELLEEIRKQS-SMEVHLHDLRGALGTLMTEGAVVIHGDSVKR 861
BLAST of EX570428 vs. TrEMBL
Match: B8A9Q9_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_02336 PE=4 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 1.553e-9 Identity = 31/58 (53.45%), Postives = 47/58 (81.03%), Query Frame = 2 Query: 2 IIMEKMQIGGRSMRLLEILEELKNQSPGNEIHLNDLRNAVSTLASEGFLSMAGESVKR 175 ++MEKMQ+GG S+R++E+LEE++ QS E+HL+DLR A+ TL +EG + + G+SVKR Sbjct: 138 LVMEKMQLGGPSVRMIELLEEIRKQS-SMEVHLHDLRGALGTLMTEGAVVIHGDSVKR 194
BLAST of EX570428 vs. TrEMBL
Match: C5XMX5_SORBI (Putative uncharacterized protein Sb03g024490 OS=Sorghum bicolor GN=Sb03g024490 PE=3 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 3.460e-9 Identity = 32/58 (55.17%), Postives = 47/58 (81.03%), Query Frame = 2 Query: 2 IIMEKMQIGGRSMRLLEILEELKNQSPGNEIHLNDLRNAVSTLASEGFLSMAGESVKR 175 +I+EKMQ+GG SMR++E+LEEL+ QS EIHL++LR A+ TL +EG + + G++VKR Sbjct: 795 LIVEKMQLGGPSMRMIELLEELRKQS-SMEIHLHELRGALGTLMTEGAVVIHGDNVKR 851
BLAST of EX570428 vs. TrEMBL
Match: C0PDH6_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 5.901e-9 Identity = 32/58 (55.17%), Postives = 46/58 (79.31%), Query Frame = 2 Query: 2 IIMEKMQIGGRSMRLLEILEELKNQSPGNEIHLNDLRNAVSTLASEGFLSMAGESVKR 175 +I+EKMQ+GG SM ++E+LEEL+ QS EIHL++LR A+ TL +EG + + GE+VKR Sbjct: 794 LIVEKMQLGGPSMHMIELLEELRKQS-SMEIHLHELRGALGTLMTEGAVVIHGENVKR 850
BLAST of EX570428 vs. TAIR peptide
Match: AT2G16440.1 (| Symbols: MCM4 | Minichromosome maintenance (MCM2/3/5) family protein | chr2:7126536-7130665 REVERSE LENGTH=847) HSP 1 Score: 69.707 bits (169), Expect = 5.244e-13 Identity = 39/61 (63.93%), Postives = 46/61 (75.41%), Query Frame = 2 Query: 2 IIMEKMQIGGRSMRLLEILEELKNQSPGN---EIHLNDLRNAVSTLASEGFLSMAGESVKR 175 I +EKMQIGG SMRL E+LEELK GN EIHL+D+R AV+TLASEGFL G+ +KR Sbjct: 787 IALEKMQIGGSSMRLSELLEELKKHG-GNINTEIHLHDVRKAVATLASEGFLVAEGDRIKR 846 The following BLAST results are available for this feature:
BLAST of EX570428 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of EX570428 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 1
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EX570428 ID=EX570428; Name=EX570428; organism=Pisum sativum; type=EST; length=385bpback to top |