FG530620

EST Overview
NameFG530620
Unique NameFG530620
TypeEST
OrganismPisum sativum (pea)
Sequence length621
Libraries
Library NameType
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of FG530620 vs. TrEMBL
Match: Q75WU8_TOBAC (Similar to CDK5 regulatory subunit-associated protein OS=Nicotiana tabacum GN=NtCAPL PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.328e-19
Identity = 50/69 (72.46%), Postives = 57/69 (82.61%), Query Frame = 3
Query:    3 GKSDKGHRVLFVNLPILDREDVNTKRNPVVGDYVEVRITRSSRASLFGNALAITKLSSFYINLEKEAVA 209
            GKSD+GHRV F NLPI D+ D N KRNP +GDYVEV IT+S+RASLFG ALAITKLSSFY +  +EAVA
Sbjct:  550 GKSDRGHRVSFTNLPIPDKVDNNGKRNPKIGDYVEVHITKSTRASLFGEALAITKLSSFYSSSHEEAVA 618          
BLAST of FG530620 vs. TrEMBL
Match: B9HFB0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_869356 PE=4 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.958e-19
Identity = 50/72 (69.44%), Postives = 62/72 (86.11%), Query Frame = 3
Query:    3 GKSDKGHRVLFVNLPILDR-EDVNTKRNPVVGDYVEVRITRSSRASLFGNALAITKLSSFYINLEKEAVACS 215
            GKSD+GHRVLF NLP+ +R ED +  RNP+VGDYVEV I +S+RASLFG+ALAIT LSSFY NL+++AVAC+
Sbjct:  551 GKSDRGHRVLFTNLPLPNRNEDGSQARNPMVGDYVEVLILKSTRASLFGDALAITTLSSFYSNLDQKAVACA 622          
BLAST of FG530620 vs. TrEMBL
Match: B9S686_RICCO (Radical sam protein, putative OS=Ricinus communis GN=RCOM_0533210 PE=4 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.272e-18
Identity = 48/72 (66.67%), Postives = 60/72 (83.33%), Query Frame = 3
Query:    3 GKSDKGHRVLFVNLPILDR-EDVNTKRNPVVGDYVEVRITRSSRASLFGNALAITKLSSFYINLEKEAVACS 215
            GK+D+GHRV F+NL + +R E    KRNPVVGDYVEVRI +S+RASLFG ALAITKLS F+ N+++EAVAC+
Sbjct:  463 GKTDRGHRVSFINLAVPNRSEGFINKRNPVVGDYVEVRILKSTRASLFGEALAITKLSLFHSNVDQEAVACA 534          
BLAST of FG530620 vs. TrEMBL
Match: A5AL29_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007911 PE=4 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.058e-13
Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 3
Query:    3 GKSDKGHRVLFVNLPILD-REDVNTKRNPVVGDYVEVRITRSSRASLFGNALAITKLSSFYINLEKEAVA 209
            GK+D+GHRV F N P+    +DV   +NP VGD+VEVRI  S+RASLFG ALAITKLS FY N + EA+A
Sbjct:  512 GKTDRGHRVSFKNTPVPHWDDDVGGNQNPRVGDFVEVRILTSTRASLFGEALAITKLSLFYSNAD-EAIA 580          
BLAST of FG530620 vs. TrEMBL
Match: D7MBI3_ARALY (Radical SAM domain-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_490998 PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.682e-12
Identity = 39/64 (60.94%), Postives = 48/64 (75.00%), Query Frame = 3
Query:    3 GKSDKGHRVLFVNLPILDR----EDVNTKRNPVVGDYVEVRITRSSRASLFGNALAITKLSSFY 182
            GK+DKGHRV FV  P+ D     +  + KRNP +GD+VEVRI +S+RASLFG ALAITKLS F+
Sbjct:  560 GKTDKGHRVSFVTKPLFDTACLLDGDDLKRNPEIGDFVEVRIEKSTRASLFGEALAITKLSLFH 623          
BLAST of FG530620 vs. TrEMBL
Match: B9DHN9_ARATH (AT4G36390 protein (Fragment) OS=Arabidopsis thaliana GN=AT4G36390 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.270e-11
Identity = 36/64 (56.25%), Postives = 49/64 (76.56%), Query Frame = 3
Query:    3 GKSDKGHRVLFVNLPILDR----EDVNTKRNPVVGDYVEVRITRSSRASLFGNALAITKLSSFY 182
            GK+DKGHRV FV  P+ D+    +  + KRNP +GD+VEV+I +S+RASLFG ALAI+K+S F+
Sbjct:  233 GKTDKGHRVSFVTKPLFDKACLLDGDDLKRNPGIGDFVEVQIEKSTRASLFGEALAISKMSLFH 296          
BLAST of FG530620 vs. TrEMBL
Match: Q0IRV6_ORYSJ (Os11g0592800 protein OS=Oryza sativa subsp. japonica GN=Os11g0592800 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.127e-10
Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 3
Query:    3 GKSDKGHRVLFVNLPILDREDVNTKRNPVVGDYVEVRITRSSRASLFGNALAITKLSSFYINLEKEAVA 209
            GK+D+GHRV F ++P+    + +  R PVVGD++EV+IT+SS ASL G+ +A T LS FY N   EA A
Sbjct:  529 GKTDRGHRVSFASVPVPHTFEGDELRKPVVGDFIEVKITKSSTASLSGDVIARTSLSKFYKNHSSEAHA 597          
BLAST of FG530620 vs. TrEMBL
Match: D7SP57_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018858001 PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.127e-10
Identity = 37/61 (60.66%), Postives = 46/61 (75.41%), Query Frame = 3
Query:    3 GKSDKGHRVLFVNLPILD-REDVNTKRNPVVGDYVEVRITRSSRASLFGNALAITKLSSFY 182
            GK+D+GHRV F N P+    +DV   +NP VGD+VEVRI  S+RASLFG ALAITKLS ++
Sbjct:  595 GKTDRGHRVSFKNTPVPHWDDDVGGNQNPRVGDFVEVRILTSTRASLFGEALAITKLSFWH 655          
BLAST of FG530620 vs. TrEMBL
Match: C5Y5E1_SORBI (Putative uncharacterized protein Sb05g023010 OS=Sorghum bicolor GN=Sb05g023010 PE=4 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.279e-10
Identity = 35/69 (50.72%), Postives = 47/69 (68.12%), Query Frame = 3
Query:    3 GKSDKGHRVLFVNLPILDREDVNTKRNPVVGDYVEVRITRSSRASLFGNALAITKLSSFYINLEKEAVA 209
            GK+D+GH+V F ++PI    +    R PVVGD+VEV+I RSS A+LFG  +A T LS F+ N+  EA A
Sbjct:  530 GKTDRGHKVSFASVPIPHTFEGEEARKPVVGDFVEVKILRSSTATLFGEPIARTSLSVFHKNVASEAQA 598          
BLAST of FG530620 vs. TrEMBL
Match: B8LMF7_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.592e-10
Identity = 39/84 (46.43%), Postives = 48/84 (57.14%), Query Frame = 3
Query:    3 GKSDKGHRVLFVNLPILD------------------REDV------NTKRNPVVGDYVEVRITRSSRASLFGNALAITKLSSFY 182
            GKSD+GHR+ F N+P+ D                   ED         KRNP +GDYVEV IT+SSRA+LFG AL +T L+SFY
Sbjct:  233 GKSDRGHRISFQNVPLTDVSKLPPHRMEIAGLGDRPAEDALNLAINGNKRNPRIGDYVEVLITKSSRATLFGEALYLTNLTSFY 316          
BLAST of FG530620 vs. SwissProt
Match: CK5P1_ARATH (CDK5RAP1-like protein OS=Arabidopsis thaliana GN=At4g36390 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.602e-12
Identity = 36/64 (56.25%), Postives = 49/64 (76.56%), Query Frame = 3
Query:    3 GKSDKGHRVLFVNLPILDR----EDVNTKRNPVVGDYVEVRITRSSRASLFGNALAITKLSSFY 182
            GK+DKGHRV FV  P+ D+    +  + KRNP +GD+VEV+I +S+RASLFG ALAI+K+S F+
Sbjct:  563 GKTDKGHRVSFVTKPLFDKACLLDGDDLKRNPGIGDFVEVQIEKSTRASLFGEALAISKMSLFH 626          
BLAST of FG530620 vs. SwissProt
Match: CK5P1_ORYSJ (CDK5RAP1-like protein OS=Oryza sativa subsp. japonica GN=Os11g0592800 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.950e-12
Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 3
Query:    3 GKSDKGHRVLFVNLPILDREDVNTKRNPVVGDYVEVRITRSSRASLFGNALAITKLSSFYINLEKEAVA 209
            GK+D+GHRV F ++P+    + +  R PVVGD++EV+IT+SS ASL G+ +A T LS FY N   EA A
Sbjct:  529 GKTDRGHRVSFASVPVPHTFEGDELRKPVVGDFIEVKITKSSTASLSGDVIARTSLSKFYKNHSSEAHA 597          
BLAST of FG530620 vs. TAIR peptide
Match: AT4G36390.1 (| Symbols: | Methylthiotransferase | chr4:17194746-17197054 REVERSE LENGTH=640)

HSP 1 Score: 72.7886 bits (177), Expect = 1.661e-13
Identity = 36/64 (56.25%), Postives = 49/64 (76.56%), Query Frame = 3
Query:    3 GKSDKGHRVLFVNLPILDR----EDVNTKRNPVVGDYVEVRITRSSRASLFGNALAITKLSSFY 182
            GK+DKGHRV FV  P+ D+    +  + KRNP +GD+VEV+I +S+RASLFG ALAI+K+S F+
Sbjct:  563 GKTDKGHRVSFVTKPLFDKACLLDGDDLKRNPGIGDFVEVQIEKSTRASLFGEALAISKMSLFH 626          
The following BLAST results are available for this feature:
BLAST of FG530620 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q75WU8_TOBAC1.328e-1972.46Similar to CDK5 regulatory subunit-associated prot... [more]
B9HFB0_POPTR2.958e-1969.44Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9S686_RICCO4.272e-1866.67Radical sam protein, putative OS=Ricinus communis ... [more]
A5AL29_VITVI7.058e-1361.43Putative uncharacterized protein OS=Vitis vinifera... [more]
D7MBI3_ARALY2.682e-1260.94Radical SAM domain-containing protein OS=Arabidops... [more]
B9DHN9_ARATH2.270e-1156.25AT4G36390 protein (Fragment) OS=Arabidopsis thalia... [more]
Q0IRV6_ORYSJ1.127e-1050.72Os11g0592800 protein OS=Oryza sativa subsp. japoni... [more]
D7SP57_VITVI1.127e-1060.66Whole genome shotgun sequence of line PN40024, sca... [more]
C5Y5E1_SORBI3.279e-1050.72Putative uncharacterized protein Sb05g023010 OS=So... [more]
B8LMF7_PICSI5.592e-1046.43Putative uncharacterized protein OS=Picea sitchens... [more]
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BLAST of FG530620 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
CK5P1_ARATH1.602e-1256.25CDK5RAP1-like protein OS=Arabidopsis thaliana GN=A... [more]
CK5P1_ORYSJ7.950e-1250.72CDK5RAP1-like protein OS=Oryza sativa subsp. japon... [more]
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BLAST of FG530620 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G36390.11.661e-1356.25| Symbols: | Methylthiotransferase | chr4:1719474... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002792Deoxyribonuclease/rho motif-related TRAMPFAMPF01938TRAMcoord: 24..51
score: 1
IPR002792Deoxyribonuclease/rho motif-related TRAMPROFILEPS50926TRAMcoord: 1..52
score: 10

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG530620 ID=FG530620; Name=FG530620; organism=Pisum sativum; type=EST; length=621bp
TTGGCAAAAGTGACAAGGGCCATCGGGTATTATTTGTCAATCTGCCAATC
TTAGATAGGGAAGATGTTAATACAAAGAGAAATCCTGTAGTTGGTGATTA
CGTTGAAGTCCGGATAACAAGATCTTCAAGGGCATCGCTCTTTGGCAATG
CACTTGCTATTACTAAACTGAGTTCGTTTTATATTAATCTGGAAAAAGAA
GCTGTTGCATGCAGCATGTAAAAGTAAAACCTTGCCGCATAAACAGTTTG
CAGTCGCAAGTTTTGGATATACTCATCGTAAATTGCATTATCCCCTTGCA
TTGATGACAAAATCGCAGTTTATGGGAAAAAGGATGCTACTTACTACTCA
AGAAAGTGAGATTATGCATTCGCCTGCAAAAATGGTTCGAGTCGTCATCA
AACTATACACTCTACCTGCAATGTAACACTAAAACCAAATAGCCTAGGGC
AGGATTGCTTTGATGGAGCACATGGAAGATTTAACGCGGCCTTTGAACAA
TCGTATTAATTTATTACCGAAGTTCGTAGGTAATAAACTATCTTGTGATA
ACATTCGGTAAGATAGTTTATTGAATGATAACATTCGGTAATAATTGGAT
CAGCTTATTTCAGATTATCTT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR002792TRAM_dom