FG534596
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FG534596 vs. TrEMBL
Match: B9GI58_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_752562 PE=4 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.772e-22 Identity = 59/138 (42.75%), Postives = 85/138 (61.59%), Query Frame = 2 Query: 2 DIGKLATASDDFTIRIWN-KRNYCT-TQRIPFAIRRRIMAMPKVECK-MLLNNEEICPKSIDDGLLSDLALQNPIKSAMPTTPPKITTSESHKNQLSSELDLTISPKNTPESAXXXXXXXXXXXXXXKRTIRDYFASS 406 ++GK+AT+SDDFT+RIWN +YC+ T R P AIRRR+MA+P+ EC+ +L+N+E I P + D LL + N +P T P I+T E+HK + S + D + + TPE+A KRTIRDYF ++ Sbjct: 366 EVGKIATSSDDFTVRIWNINSSYCSSTTRSPSAIRRRVMAIPREECRELLMNDERIDPTKVPDNLLPSDEVFNQNNPPIPITMPTISTPEAHKKKFSLDSDSKETFEKTPEAAMKSPSSVLNPPSSLKRTIRDYFLAA 503
BLAST of FG534596 vs. TrEMBL
Match: D7TWJ7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_66.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032413001 PE=4 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.323e-16 Identity = 53/139 (38.13%), Postives = 82/139 (58.99%), Query Frame = 2 Query: 2 DIGKLATASDDFTIRIWNKRNYCTTQ-RIPFAIRRRIMAMPKVECKMLLNNEEICPKSIDD-GLLSDLALQNPIKSAMPTTPPKITTSESHKNQLSSELDLTISPKNTPESAXXXXXXXXXXXXXXKR-TIRDYFASSS 409 ++GK+AT+SDD+++R+W+ ++ C++ R P +IRRR MA+P +E + + +EE + D L + + + S P T PKI+T ES K Q S ELDL + + TP++A KR TIRDYF +SS Sbjct: 371 ELGKIATSSDDYSVRVWDMQSSCSSSSRSPSSIRRRGMAIPNMEPRNIFMHEEPSSSTKDSRSLCPPDEVADQLNSHNPITMPKISTPESQKQQFSLELDLQETFEKTPDAALKSPASVLNPPPSLKRKTIRDYFLASS 509
BLAST of FG534596 vs. TrEMBL
Match: A5AJM3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035386 PE=4 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.202e-15 Identity = 52/140 (37.14%), Postives = 83/140 (59.29%), Query Frame = 2 Query: 2 DIGKLATASDDFTIRIWNKRNYC-TTQRIPFAIRRRIMAMPKVECKMLLNNEEICPKSIDD-GLLSDLALQNPIKSAMPTTPPKITTSESHKNQ-LSSELDLTISPKNTPESAXXXXXXXXXXXXXXKR-TIRDYFASSS 409 ++GK+AT+SDD+T+R+W+ ++ C ++ R P +IRRR+MA+P +E + + +EE + D L + + + S P T PKI+T ES K Q S ELDL + + TP++A KR TIRDYF +++ Sbjct: 387 ELGKIATSSDDYTVRVWDMQSSCSSSSRSPSSIRRRVMAIPNMEPRNIFMHEEPSSXTKDSRXLCPPDEVADQLNSHNPITMPKISTPESQKQQSFSLELDLQETFEKTPDAALKSPASVLNPPPSLKRKTIRDYFLATA 526
BLAST of FG534596 vs. TrEMBL
Match: B9S642_RICCO (Cell division cycle protein cdt2, putative OS=Ricinus communis GN=RCOM_1064120 PE=4 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.050e-14 Identity = 56/137 (40.88%), Postives = 79/137 (57.66%), Query Frame = 2 Query: 8 GKLATASDDFTIRIWN-KRNYCTTQRIPFAIRRRIMAMPKVECKMLLNNEE--ICPKSIDDGLLSDLALQNPIKSAMPTTPPKITTSESHKNQLSSELDLTISPKNTPESAXXXXXXXXXXXXXXKR-TIRDYFASS 406 GK+AT+SDDFT+RIWN + N ++ R P +IRRRIMA+P EC+ LL NEE K+ + SD LQ + +++ P ++T E+HK + SS D + TPE+A KR TIRDYF ++ Sbjct: 368 GKIATSSDDFTVRIWNIQSNNYSSSRSPSSIRRRIMAIPSEECRRLLMNEEPLSLTKTSNHLNSSDELLQVDLPNSI--RMPTLSTPEAHKRKFSSGSDSKGTFDKTPEAAMKSPSSVLNPPSSLKRKTIRDYFLAA 502
BLAST of FG534596 vs. TrEMBL
Match: Q9LVX5_ARATH (Similarity to unknown protein OS=Arabidopsis thaliana PE=4 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 1.287e-8 Identity = 52/144 (36.11%), Postives = 74/144 (51.39%), Query Frame = 2 Query: 2 DIGKLATASDDFTIRIWN-KRNYCTTQRIPFA---IRRRIMAMPKVECK--MLLNNEEICPK-----SIDDGLLSDLALQNPIKSAMPTTPPKITTSESHKNQLSSELDLTISPKNTPESAXXXXXXXXXXXXXXK-RTIRDYF 397 +IGK+ATASDDFT+R+WN + N CT + ++RR+ A+ E K + +N E P+ S DD +D ++ PI P + K T+S S + LSSE D+ + TPE+ K RTIRDYF Sbjct: 424 EIGKVATASDDFTVRLWNIENNICTNANATASVSRVKRRVTALSNTEAKERLEMNRETESPQKHSSLSSDDDYNNDQSM--PI-IRTPESQKKKTSSSSSLSSLSSEEDIIC--ERTPETTFNSPSSVLNPPSSVKRRTIRDYF 562
BLAST of FG534596 vs. TrEMBL
Match: Q94C55_ARATH (Putative uncharacterized protein At3g27640 OS=Arabidopsis thaliana GN=At3g27640 PE=2 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 1.287e-8 Identity = 52/144 (36.11%), Postives = 74/144 (51.39%), Query Frame = 2 Query: 2 DIGKLATASDDFTIRIWN-KRNYCTTQRIPFA---IRRRIMAMPKVECK--MLLNNEEICPK-----SIDDGLLSDLALQNPIKSAMPTTPPKITTSESHKNQLSSELDLTISPKNTPESAXXXXXXXXXXXXXXK-RTIRDYF 397 +IGK+ATASDDFT+R+WN + N CT + ++RR+ A+ E K + +N E P+ S DD +D ++ PI P + K T+S S + LSSE D+ + TPE+ K RTIRDYF Sbjct: 393 EIGKVATASDDFTVRLWNIENNICTNANATASVSRVKRRVTALSNTEAKERLEMNRETESPQKHSSLSSDDDYNNDQSM--PI-IRTPESQKKKTSSSSSLSSLSSEEDIIC--ERTPETTFNSPSSVLNPPSSVKRRTIRDYF 531
BLAST of FG534596 vs. TrEMBL
Match: D7LPI8_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_905015 PE=4 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 5.407e-7 Identity = 50/148 (33.78%), Postives = 70/148 (47.30%), Query Frame = 2 Query: 2 DIGKLATASDDFTIRIWN-KRNYCTTQRIPFA---IRRRIMAMPKVECK--MLLNNEEICPKSIDDGLLSDLALQNPIKSAMPTTP-PKITTSESHKNQLSSELDLT--------ISPKNTPESAXXXXXXXXXXXXXXK-RTIRDYF 397 +IGK+ATASDDFT+R+WN + N CT + ++RR+ A E K + +N E P+ LL D + N + + TP + TS S + LSS L+ I + TPE+ K RTIRDYF Sbjct: 388 EIGKVATASDDFTVRLWNIENNRCTNTNATASVSRVKRRVTAFSNTEAKERLEMNRETESPQK-HSSLLDDDYINNDQSTPIIRTPESQKKTSSSSSSSLSSLSSLSSLSSSEEDIMCERTPETTFNSPSSVLNPPSSVKRRTIRDYF 534
BLAST of FG534596 vs. TAIR peptide
Match: AT3G27640.1 (| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr3:10232307-10235467 FORWARD LENGTH=535) HSP 1 Score: 63.929 bits (154), Expect = 8.880e-11 Identity = 52/144 (36.11%), Postives = 74/144 (51.39%), Query Frame = 2 Query: 2 DIGKLATASDDFTIRIWN-KRNYCTTQRIPFA---IRRRIMAMPKVECK--MLLNNEEICPK-----SIDDGLLSDLALQNPIKSAMPTTPPKITTSESHKNQLSSELDLTISPKNTPESAXXXXXXXXXXXXXXK-RTIRDYF 397 +IGK+ATASDDFT+R+WN + N CT + ++RR+ A+ E K + +N E P+ S DD +D ++ PI P + K T+S S + LSSE D+ + TPE+ K RTIRDYF Sbjct: 393 EIGKVATASDDFTVRLWNIENNICTNANATASVSRVKRRVTALSNTEAKERLEMNRETESPQKHSSLSSDDDYNNDQSM--PI-IRTPESQKKKTSSSSSLSSLSSEEDIIC--ERTPETTFNSPSSVLNPPSSVKRRTIRDYF 531 The following BLAST results are available for this feature:
BLAST of FG534596 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 7
BLAST of FG534596 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FG534596 ID=FG534596; Name=FG534596; organism=Pisum sativum; type=EST; length=673bpback to top |