FG534596

EST Overview
NameFG534596
Unique NameFG534596
TypeEST
OrganismPisum sativum (pea)
Sequence length673
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of FG534596 vs. TrEMBL
Match: B9GI58_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_752562 PE=4 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.772e-22
Identity = 59/138 (42.75%), Postives = 85/138 (61.59%), Query Frame = 2
Query:    2 DIGKLATASDDFTIRIWN-KRNYCT-TQRIPFAIRRRIMAMPKVECK-MLLNNEEICPKSIDDGLLSDLALQNPIKSAMPTTPPKITTSESHKNQLSSELDLTISPKNTPESAXXXXXXXXXXXXXXKRTIRDYFASS 406
            ++GK+AT+SDDFT+RIWN   +YC+ T R P AIRRR+MA+P+ EC+ +L+N+E I P  + D LL    + N     +P T P I+T E+HK + S + D   + + TPE+A              KRTIRDYF ++
Sbjct:  366 EVGKIATSSDDFTVRIWNINSSYCSSTTRSPSAIRRRVMAIPREECRELLMNDERIDPTKVPDNLLPSDEVFNQNNPPIPITMPTISTPEAHKKKFSLDSDSKETFEKTPEAAMKSPSSVLNPPSSLKRTIRDYFLAA 503          
BLAST of FG534596 vs. TrEMBL
Match: D7TWJ7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_66.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032413001 PE=4 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.323e-16
Identity = 53/139 (38.13%), Postives = 82/139 (58.99%), Query Frame = 2
Query:    2 DIGKLATASDDFTIRIWNKRNYCTTQ-RIPFAIRRRIMAMPKVECKMLLNNEEICPKSIDD-GLLSDLALQNPIKSAMPTTPPKITTSESHKNQLSSELDLTISPKNTPESAXXXXXXXXXXXXXXKR-TIRDYFASSS 409
            ++GK+AT+SDD+++R+W+ ++ C++  R P +IRRR MA+P +E + +  +EE    + D   L     + + + S  P T PKI+T ES K Q S ELDL  + + TP++A              KR TIRDYF +SS
Sbjct:  371 ELGKIATSSDDYSVRVWDMQSSCSSSSRSPSSIRRRGMAIPNMEPRNIFMHEEPSSSTKDSRSLCPPDEVADQLNSHNPITMPKISTPESQKQQFSLELDLQETFEKTPDAALKSPASVLNPPPSLKRKTIRDYFLASS 509          
BLAST of FG534596 vs. TrEMBL
Match: A5AJM3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035386 PE=4 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.202e-15
Identity = 52/140 (37.14%), Postives = 83/140 (59.29%), Query Frame = 2
Query:    2 DIGKLATASDDFTIRIWNKRNYC-TTQRIPFAIRRRIMAMPKVECKMLLNNEEICPKSIDD-GLLSDLALQNPIKSAMPTTPPKITTSESHKNQ-LSSELDLTISPKNTPESAXXXXXXXXXXXXXXKR-TIRDYFASSS 409
            ++GK+AT+SDD+T+R+W+ ++ C ++ R P +IRRR+MA+P +E + +  +EE    + D   L     + + + S  P T PKI+T ES K Q  S ELDL  + + TP++A              KR TIRDYF +++
Sbjct:  387 ELGKIATSSDDYTVRVWDMQSSCSSSSRSPSSIRRRVMAIPNMEPRNIFMHEEPSSXTKDSRXLCPPDEVADQLNSHNPITMPKISTPESQKQQSFSLELDLQETFEKTPDAALKSPASVLNPPPSLKRKTIRDYFLATA 526          
BLAST of FG534596 vs. TrEMBL
Match: B9S642_RICCO (Cell division cycle protein cdt2, putative OS=Ricinus communis GN=RCOM_1064120 PE=4 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.050e-14
Identity = 56/137 (40.88%), Postives = 79/137 (57.66%), Query Frame = 2
Query:    8 GKLATASDDFTIRIWN-KRNYCTTQRIPFAIRRRIMAMPKVECKMLLNNEE--ICPKSIDDGLLSDLALQNPIKSAMPTTPPKITTSESHKNQLSSELDLTISPKNTPESAXXXXXXXXXXXXXXKR-TIRDYFASS 406
            GK+AT+SDDFT+RIWN + N  ++ R P +IRRRIMA+P  EC+ LL NEE     K+ +    SD  LQ  + +++    P ++T E+HK + SS  D   +   TPE+A              KR TIRDYF ++
Sbjct:  368 GKIATSSDDFTVRIWNIQSNNYSSSRSPSSIRRRIMAIPSEECRRLLMNEEPLSLTKTSNHLNSSDELLQVDLPNSI--RMPTLSTPEAHKRKFSSGSDSKGTFDKTPEAAMKSPSSVLNPPSSLKRKTIRDYFLAA 502          
BLAST of FG534596 vs. TrEMBL
Match: Q9LVX5_ARATH (Similarity to unknown protein OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 1.287e-8
Identity = 52/144 (36.11%), Postives = 74/144 (51.39%), Query Frame = 2
Query:    2 DIGKLATASDDFTIRIWN-KRNYCTTQRIPFA---IRRRIMAMPKVECK--MLLNNEEICPK-----SIDDGLLSDLALQNPIKSAMPTTPPKITTSESHKNQLSSELDLTISPKNTPESAXXXXXXXXXXXXXXK-RTIRDYF 397
            +IGK+ATASDDFT+R+WN + N CT      +   ++RR+ A+   E K  + +N E   P+     S DD   +D ++  PI    P +  K T+S S  + LSSE D+    + TPE+               K RTIRDYF
Sbjct:  424 EIGKVATASDDFTVRLWNIENNICTNANATASVSRVKRRVTALSNTEAKERLEMNRETESPQKHSSLSSDDDYNNDQSM--PI-IRTPESQKKKTSSSSSLSSLSSEEDIIC--ERTPETTFNSPSSVLNPPSSVKRRTIRDYF 562          
BLAST of FG534596 vs. TrEMBL
Match: Q94C55_ARATH (Putative uncharacterized protein At3g27640 OS=Arabidopsis thaliana GN=At3g27640 PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 1.287e-8
Identity = 52/144 (36.11%), Postives = 74/144 (51.39%), Query Frame = 2
Query:    2 DIGKLATASDDFTIRIWN-KRNYCTTQRIPFA---IRRRIMAMPKVECK--MLLNNEEICPK-----SIDDGLLSDLALQNPIKSAMPTTPPKITTSESHKNQLSSELDLTISPKNTPESAXXXXXXXXXXXXXXK-RTIRDYF 397
            +IGK+ATASDDFT+R+WN + N CT      +   ++RR+ A+   E K  + +N E   P+     S DD   +D ++  PI    P +  K T+S S  + LSSE D+    + TPE+               K RTIRDYF
Sbjct:  393 EIGKVATASDDFTVRLWNIENNICTNANATASVSRVKRRVTALSNTEAKERLEMNRETESPQKHSSLSSDDDYNNDQSM--PI-IRTPESQKKKTSSSSSLSSLSSEEDIIC--ERTPETTFNSPSSVLNPPSSVKRRTIRDYF 531          
BLAST of FG534596 vs. TrEMBL
Match: D7LPI8_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_905015 PE=4 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 5.407e-7
Identity = 50/148 (33.78%), Postives = 70/148 (47.30%), Query Frame = 2
Query:    2 DIGKLATASDDFTIRIWN-KRNYCTTQRIPFA---IRRRIMAMPKVECK--MLLNNEEICPKSIDDGLLSDLALQNPIKSAMPTTP-PKITTSESHKNQLSSELDLT--------ISPKNTPESAXXXXXXXXXXXXXXK-RTIRDYF 397
            +IGK+ATASDDFT+R+WN + N CT      +   ++RR+ A    E K  + +N E   P+     LL D  + N   + +  TP  +  TS S  + LSS   L+        I  + TPE+               K RTIRDYF
Sbjct:  388 EIGKVATASDDFTVRLWNIENNRCTNTNATASVSRVKRRVTAFSNTEAKERLEMNRETESPQK-HSSLLDDDYINNDQSTPIIRTPESQKKTSSSSSSSLSSLSSLSSLSSSEEDIMCERTPETTFNSPSSVLNPPSSVKRRTIRDYF 534          
BLAST of FG534596 vs. TAIR peptide
Match: AT3G27640.1 (| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr3:10232307-10235467 FORWARD LENGTH=535)

HSP 1 Score: 63.929 bits (154), Expect = 8.880e-11
Identity = 52/144 (36.11%), Postives = 74/144 (51.39%), Query Frame = 2
Query:    2 DIGKLATASDDFTIRIWN-KRNYCTTQRIPFA---IRRRIMAMPKVECK--MLLNNEEICPK-----SIDDGLLSDLALQNPIKSAMPTTPPKITTSESHKNQLSSELDLTISPKNTPESAXXXXXXXXXXXXXXK-RTIRDYF 397
            +IGK+ATASDDFT+R+WN + N CT      +   ++RR+ A+   E K  + +N E   P+     S DD   +D ++  PI    P +  K T+S S  + LSSE D+    + TPE+               K RTIRDYF
Sbjct:  393 EIGKVATASDDFTVRLWNIENNICTNANATASVSRVKRRVTALSNTEAKERLEMNRETESPQKHSSLSSDDDYNNDQSM--PI-IRTPESQKKKTSSSSSLSSLSSEEDIIC--ERTPETTFNSPSSVLNPPSSVKRRTIRDYF 531          
The following BLAST results are available for this feature:
BLAST of FG534596 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 7
Match NameE-valueIdentityDescription
B9GI58_POPTR7.772e-2242.75Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7TWJ7_VITVI8.323e-1638.13Whole genome shotgun sequence of line PN40024, sca... [more]
A5AJM3_VITVI9.202e-1537.14Putative uncharacterized protein OS=Vitis vinifera... [more]
B9S642_RICCO2.050e-1440.88Cell division cycle protein cdt2, putative OS=Rici... [more]
Q9LVX5_ARATH1.287e-836.11Similarity to unknown protein OS=Arabidopsis thali... [more]
Q94C55_ARATH1.287e-836.11Putative uncharacterized protein At3g27640 OS=Arab... [more]
D7LPI8_ARALY5.407e-733.78Putative uncharacterized protein OS=Arabidopsis ly... [more]
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BLAST of FG534596 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G27640.18.880e-1136.11| Symbols: | Transducin/WD40 repeat-like superfam... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 33..43
score
NoneNo IPR availableSEGsegsegcoord: 111..124
score
IPR017986WD40-repeat-containing domainPROFILEPS50294WD_REPEATS_REGIONcoord: 1..27
score: 8
IPR019782WD40 repeat 2PROFILEPS50082WD_REPEATS_2coord: 1..18
score: 8

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG534596 ID=FG534596; Name=FG534596; organism=Pisum sativum; type=EST; length=673bp
TGACATTGGAAAATTAGCAACTGCTTCTGATGATTTCACAATCCGGATAT
GGAATAAGCGCAATTATTGTACCACACAAAGGATTCCATTTGCCATCCGA
AGAAGAATTATGGCCATGCCTAAAGTCGAGTGCAAAATGCTCTTGAACAA
TGAAGAAATTTGCCCCAAATCCATTGACGATGGCCTATTATCTGATTTAG
CTCTGCAAAACCCAATAAAGTCAGCCATGCCTACCACCCCACCTAAAATC
ACTACATCTGAAAGCCATAAAAACCAACTTTCATCAGAATTGGATCTAAC
CATATCTCCTAAAAACACTCCAGAATCTGCTTTGAAGAGTCCTTCATCTG
TATTGAACCCACCATCCTCCCTAAAAAGAACCATCCGAGACTACTTTGCA
TCATCTTCTTGAATCTTTTAGGCAAATTAAACAAGCTAAATTTTGTGATA
AGTAGCTGTAGATAGTGATCCTATGATAAAGGTGGCTTGAGCGGCTTGGA
GTTTCTTCAATTATGTCATTGGGTTATTTGAAATGTAAAGTTCATAAAAG
GATTGGTTATAGCAAGTCTGAAAGCTAAAAGCTAGATACATGTAAAGCTG
GCATTTTTTTGCTTCTGCTTATTTGCTAGATACAAAGGATGTGTGCTATA
TTTTCTAATGATTAGCATATGAA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR017986WD40_repeat_dom
IPR019782WD40 repeat 2