FG534808

EST Overview
NameFG534808
Unique NameFG534808
TypeEST
OrganismPisum sativum (pea)
Sequence length436
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
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BLAST of FG534808 vs. TrEMBL
Match: A5BF84_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029273 PE=4 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.444e-15
Identity = 39/62 (62.90%), Postives = 44/62 (70.97%), Query Frame = 2 
Query:    2 KQTGCSWVEIAGFVNCFVSRDEKHPQSDEICYMLDKLTMDMKDAGYKPLYGLNLNMILDSNE 187
            K+ GCSWVE+AG VNCF+SRD KHPQ  EI  ML+KL M+MKDAGYKP   L    I  S E
Sbjct:   41 KEAGCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKDAGYKPCLNLQTGGISASEE 102
[Close]
BLAST of FG534808 vs. TrEMBL
Match: A5B6W9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000699 PE=4 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.444e-15
Identity = 39/62 (62.90%), Postives = 44/62 (70.97%), Query Frame = 2 
Query:    2 KQTGCSWVEIAGFVNCFVSRDEKHPQSDEICYMLDKLTMDMKDAGYKPLYGLNLNMILDSNE 187
            K+ GCSWVE+AG VNCF+SRD KHPQ  EI  ML+KL M+MKDAGYKP   L    I  S E
Sbjct:  764 KEAGCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKDAGYKPCLNLQTGGISASEE 825
[Close]
BLAST of FG534808 vs. SwissProt
Match: PP246_ARATH (Pentatricopeptide repeat-containing protein At3g22150, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.920e-7
Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 2 
Query:    2 KQTGCSWVEIAGFVNCFVSRDEKHPQSDEICYMLDKLTMDMK 127
            K+ G S +EIAG+VNCFVSRD++HP S EI  ++D L  DM+
Sbjct:  760 KEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMR 801
[Close]
BLAST of FG534808 vs. TAIR peptide
Match: AT3G22150.1 (| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:7813028-7815490 FORWARD LENGTH=820)

HSP 1 Score: 54.6842 bits (130), Expect = 2.335e-8
Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 2 
Query:    2 KQTGCSWVEIAGFVNCFVSRDEKHPQSDEICYMLDKLTMDMK 127
            K+ G S +EIAG+VNCFVSRD++HP S EI  ++D L  DM+
Sbjct:  760 KEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMR 801
[Close]
BLAST of FG534808 vs. TAIR peptide
Match: AT3G24000.1 (| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:8672774-8674881 FORWARD LENGTH=665)

HSP 1 Score: 50.0618 bits (118), Expect = 5.750e-7
Identity = 20/48 (41.67%), Postives = 31/48 (64.58%), Query Frame = 2 
Query:    2 KQTGCSWVEIAGFVNCFVSRDEKHPQSDEICYMLDKLTMDMKDAGYKP 145
            K+  CSWVEI   ++ FV+ DE+HPQ +EI    +++   +K+ GY P
Sbjct:  497 KEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVP 544
The following BLAST results are available for this feature:
BLAST of FG534808 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
A5BF84_VITVI5.444e-1562.90Putative uncharacterized protein OS=Vitis vinifera... [more]
A5B6W9_VITVI5.444e-1562.90Putative uncharacterized protein OS=Vitis vinifera... [more]
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BLAST of FG534808 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
PP246_ARATH1.920e-757.14Pentatricopeptide repeat-containing protein At3g22... [more]
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BLAST of FG534808 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G22150.12.335e-857.14| Symbols: | Tetratricopeptide repeat (TPR)-like ... [more]
AT3G24000.15.750e-741.67| Symbols: | Tetratricopeptide repeat (TPR)-like ... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10483PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 1..48
score: 7.9
NoneNo IPR availablePANTHERPTHR10483:SF4SELENIUM-BINDING PROTEINcoord: 1..48
score: 7.9

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG534808 ID=FG534808; Name=FG534808; organism=Pisum sativum; type=EST; length=436bp
AAAACAAACAGGATGTAGTTGGGTTGAGATTGCTGGGTTTGTAAACTGCT
TTGTATCTAGAGATGAGAAGCACCCTCAAAGTGATGAAATATGTTATATG
TTGGACAAGTTGACTATGGACATGAAGGACGCGGGTTACAAACCACTTTA
CGGCTTAAATTTAAATATGATTTTGGATTCTAATGAATGAATTGAATAAT
TATCACAAGTTTTTATCAGAGGGAGGTGGTGGTTGGTTTATGGTGGGAAT
TGTTATGAAAGTAACAACTGATAATAGTTTCTGGACCTGCATAAATTTAT
CCTATGTACACCACAACAGCCACTTGTTTGAAACACTTAGGCTGTTCATT
CATTTGAAACAGATTGTAATTGGTTAAAAAATCAAACCATTCATGTATAT
TACGACTGTGAAATAATTACTTACAAGTTTGATCAT
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