FG536280

EST Overview
NameFG536280
Unique NameFG536280
TypeEST
OrganismPisum sativum (pea)
Sequence length505
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of FG536280 vs. TrEMBL
Match: D7TBP6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015396001 PE=4 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.643e-22
Identity = 59/117 (50.43%), Postives = 70/117 (59.83%), Query Frame = 2
Query:    8 DEEERVIDRLLMHYSKKPSSIAGPEKXXXXXXXXXXXQMDEAPDKTP--------ETVPRAPRSVSLPHEQSQEMEVKKVFTRAASFQPDRSKEARHVHPNLPEYDDLAARLASLRG 334
            DEEER+IDRLL+HYSKKP++   P K              E+P+           E VP   RSVSLP EQ+   E  KVF R  SFQPD   +ARHVHP LP+YDDLAAR A+L+G
Sbjct:  610 DEEERIIDRLLLHYSKKPTAYE-PGKVRKKSKAHPSHHSGESPENESKEGPGVKSEIVPTTARSVSLPREQTSTSEATKVFARTKSFQPDMLNQARHVHPKLPDYDDLAARFAALKG 725          
BLAST of FG536280 vs. TrEMBL
Match: B9RKS4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1053110 PE=4 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.065e-21
Identity = 59/120 (49.17%), Postives = 72/120 (60.00%), Query Frame = 2
Query:    8 DEEERVIDRLLMHYSKKPSSIAGPEKXXXXXXXXXXXQMDEAPDKTPETVPR-----------APRSVSLPHEQSQEMEVKKVFTRAASFQPDRSKEARHVHPNLPEYDDLAARLASLRG 334
            DEEER+ID+LL+HYSKKPS  AG                    D++P+   +            PRS+SLP EQ+   E  KVFTRAASFQPD S  A+HVHP LP+YDDLAAR A+L+G
Sbjct:  611 DEEERIIDKLLIHYSKKPS--AGEPGRVRRKSKSHHADDQGIEDRSPQHSSKDGADEILEMLPPPRSISLPREQTAPSEATKVFTRAASFQPDGSNPAKHVHPKLPDYDDLAARFAALKG 728          
BLAST of FG536280 vs. TrEMBL
Match: Q8RXT2_ARATH (Putative uncharacterized protein At4g32350 OS=Arabidopsis thaliana GN=At4g32350 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.455e-18
Identity = 53/112 (47.32%), Postives = 69/112 (61.61%), Query Frame = 2
Query:    2 KQDEEERVIDRLLMHYSKKPSSIAGPEKXXXXXXXXXXXQMDEAPDKTPETVPRAPRSVSLPHEQ-SQEMEVKKVFTRAASFQPDRSKEARHVHPNLPEYDDLAARLASLRG 334
            ++D EE+++D+LLMHYSKKPSS                 +  E+ ++    + +  RS SLP EQ +   E  K F RAASFQP+RS EA+HVHP LP YDDLAAR A L+G
Sbjct:  622 EKDSEEKMMDKLLMHYSKKPSSYEKDNVQEESKSRRTHLKKGESDEEM--MIHQPARSRSLPAEQLAGPSEPAKTFARAASFQPERSSEAKHVHPKLPNYDDLAARFAELKG 731          
BLAST of FG536280 vs. TrEMBL
Match: O49357_ARATH (Putative uncharacterized protein AT4g32350 OS=Arabidopsis thaliana GN=F10M6.20 PE=4 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.455e-18
Identity = 53/112 (47.32%), Postives = 69/112 (61.61%), Query Frame = 2
Query:    2 KQDEEERVIDRLLMHYSKKPSSIAGPEKXXXXXXXXXXXQMDEAPDKTPETVPRAPRSVSLPHEQ-SQEMEVKKVFTRAASFQPDRSKEARHVHPNLPEYDDLAARLASLRG 334
            ++D EE+++D+LLMHYSKKPSS                 +  E+ ++    + +  RS SLP EQ +   E  K F RAASFQP+RS EA+HVHP LP YDDLAAR A L+G
Sbjct:  620 EKDSEEKMMDKLLMHYSKKPSSYEKDNVQEESKSRRTHLKKGESDEEM--MIHQPARSRSLPAEQLAGPSEPAKTFARAASFQPERSSEAKHVHPKLPNYDDLAARFAELKG 729          
BLAST of FG536280 vs. TrEMBL
Match: D7MA57_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_913214 PE=4 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.714e-17
Identity = 50/111 (45.05%), Postives = 64/111 (57.66%), Query Frame = 2
Query:    2 KQDEEERVIDRLLMHYSKKPSSIAGPEKXXXXXXXXXXXQMDEAPDKTPETVPRAPRSVSLPHEQSQEMEVKKVFTRAASFQPDRSKEARHVHPNLPEYDDLAARLASLRG 334
            ++D EE+++D+LLMHYSKKPSS                 +  E+ ++     P   RS+  P   +   E  K F RAASFQP RS EA+HVHP LP YDDLAAR A L+G
Sbjct:  622 EKDSEEKLMDKLLMHYSKKPSSYEKDNVQQESKSRRTHLKKGESDEEMMIYQPARSRSLP-PEHLAGPSEPAKTFARAASFQPKRSSEAKHVHPKLPNYDDLAARFAELKG 731          
BLAST of FG536280 vs. TrEMBL
Match: Q6ETI1_ORYSJ (Os02g0159200 protein OS=Oryza sativa subsp. japonica GN=B1103G11.24 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.197e-10
Identity = 44/116 (37.93%), Postives = 64/116 (55.17%), Query Frame = 2
Query:    5 QDEEERVIDRLLMHYSKKPSSIAGPEKXXXXXXXXXXXQMDEAPD-----KTPETVPRAP--RSVSLPHEQSQEMEVKKVFTRAASFQPDRSKEARHVHPNLPEYDDLAARLASLR 331
            +D+EERV+D+LLMHYSKK   I   E            + D+  D        E  P+ P  R+VSLP +        K   R+ S QPD+S+    VHP++P++D+LAAR+++LR
Sbjct:  562 RDDEERVMDKLLMHYSKK--GIDREEHKTRTKSRTPRPRADQPADGVGERSNREVAPQHPPERTVSLPSDSGNLGVKPKAPARSISMQPDKSRGI--VHPSMPDFDELAARISALR 673          
BLAST of FG536280 vs. TrEMBL
Match: A2X149_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05930 PE=4 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.197e-10
Identity = 44/116 (37.93%), Postives = 64/116 (55.17%), Query Frame = 2
Query:    5 QDEEERVIDRLLMHYSKKPSSIAGPEKXXXXXXXXXXXQMDEAPD-----KTPETVPRAP--RSVSLPHEQSQEMEVKKVFTRAASFQPDRSKEARHVHPNLPEYDDLAARLASLR 331
            +D+EERV+D+LLMHYSKK   I   E            + D+  D        E  P+ P  R+VSLP +        K   R+ S QPD+S+    VHP++P++D+LAAR+++LR
Sbjct:  562 RDDEERVMDKLLMHYSKK--GIDREEHKTRTKSRTPRPRADQPADGVGERSNREVAPQHPPERTVSLPSDSGNLGVKPKAPARSISMQPDKSRGI--VHPSMPDFDELAARISALR 673          
BLAST of FG536280 vs. TrEMBL
Match: C5Z8B5_SORBI (Putative uncharacterized protein Sb10g027870 OS=Sorghum bicolor GN=Sb10g027870 PE=4 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.159e-10
Identity = 44/108 (40.74%), Postives = 59/108 (54.63%), Query Frame = 2
Query:    8 DEEERVIDRLLMHYSKKPSSIAGPEKXXXXXXXXXXXQMDEAPDKTPETVPRAPRSVSLPHEQSQEMEVKKVFTRAASFQPDRSKEARHVHPNLPEYDDLAARLASLR 331
            DEE+R++D+LLMHYSKK  S     +              +A  K     P   R++SLP E     E  KV  R+ S QPD  K A HVHP +P++D+LAAR+ +LR
Sbjct:  631 DEEDRMMDKLLMHYSKKKGSDPTNNEGHI-----------DAVQKVSLHPP--GRAISLPPESVGPGEDAKVPARSTSLQPDGPKSA-HVHPKMPDFDELAARVKALR 724          
BLAST of FG536280 vs. TrEMBL
Match: B8B1S4_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24235 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 3.008e-8
Identity = 40/110 (36.36%), Postives = 59/110 (53.64%), Query Frame = 2
Query:    8 DEEERVIDRLLMHYSKKPSSIAGPEKXXXXXXXXXXXQMDEAPDKTPETVPRAP--RSVSLPHEQSQEMEVKKVFTRAASFQPDRSKEARHVHPNLPEYDDLAARLASLR 331
            DEEER++D+LL HYSKK                      ++A +++ +     P  R++SLP E     E  K   R+ S QPD  K   HVHP +P++D+LAAR+++LR
Sbjct:  648 DEEERMMDKLLRHYSKK-----------GLDAEINPAPTNKAEEQSEQKGSMHPPGRAISLPGESVCRDEDVKFPARSTSLQPDCPKTV-HVHPKMPDFDELAARVSALR 745          
BLAST of FG536280 vs. TrEMBL
Match: C5XVD7_SORBI (Putative uncharacterized protein Sb04g004110 OS=Sorghum bicolor GN=Sb04g004110 PE=4 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 3.929e-8
Identity = 41/120 (34.17%), Postives = 65/120 (54.17%), Query Frame = 2
Query:    5 QDEEERVIDRLLMHYSKKPSSIAGPEKXXXXXXXXXXXQMDEAPD---------KTPETVPRAPRSVSLPHEQS--QEMEVKKVFTRAASFQPDRSKEARHVHPNLPEYDDLAARLASLR 331
            +DEEE+++D+LLMHYSKK   +   E            + D+  D         K   +  R  R+VSLP E +  +     K   R+ S QP+ S+   +VHP++P++D+LAAR+++LR
Sbjct:  566 RDEEEKMMDKLLMHYSKK--GLDREEHKERVKSRIPRPRADQRADDGAGELSNNKEVASAHRPERAVSLPSESASPKAKPKPKAPVRSLSMQPEMSRG--NVHPSMPDFDELAARISALR 681          
BLAST of FG536280 vs. TAIR peptide
Match: AT4G32350.1 (| Symbols: | Regulator of Vps4 activity in the MVB pathway protein | chr4:15617634-15620642 FORWARD LENGTH=732)

HSP 1 Score: 95.1301 bits (235), Expect = 2.151e-20
Identity = 53/112 (47.32%), Postives = 69/112 (61.61%), Query Frame = 2
Query:    2 KQDEEERVIDRLLMHYSKKPSSIAGPEKXXXXXXXXXXXQMDEAPDKTPETVPRAPRSVSLPHEQ-SQEMEVKKVFTRAASFQPDRSKEARHVHPNLPEYDDLAARLASLRG 334
            ++D EE+++D+LLMHYSKKPSS                 +  E+ ++    + +  RS SLP EQ +   E  K F RAASFQP+RS EA+HVHP LP YDDLAAR A L+G
Sbjct:  622 EKDSEEKMMDKLLMHYSKKPSSYEKDNVQEESKSRRTHLKKGESDEEM--MIHQPARSRSLPAEQLAGPSEPAKTFARAASFQPERSSEAKHVHPKLPNYDDLAARFAELKG 731          
The following BLAST results are available for this feature:
BLAST of FG536280 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
D7TBP6_VITVI1.643e-2250.43Whole genome shotgun sequence of line PN40024, sca... [more]
B9RKS4_RICCO1.065e-2149.17Putative uncharacterized protein OS=Ricinus commun... [more]
Q8RXT2_ARATH2.455e-1847.32Putative uncharacterized protein At4g32350 OS=Arab... [more]
O49357_ARATH2.455e-1847.32Putative uncharacterized protein AT4g32350 OS=Arab... [more]
D7MA57_ARALY2.714e-1745.05Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q6ETI1_ORYSJ4.197e-1037.93Os02g0159200 protein OS=Oryza sativa subsp. japoni... [more]
A2X149_ORYSI4.197e-1037.93Putative uncharacterized protein OS=Oryza sativa s... [more]
C5Z8B5_SORBI7.159e-1040.74Putative uncharacterized protein Sb10g027870 OS=So... [more]
B8B1S4_ORYSI3.008e-836.36Putative uncharacterized protein OS=Oryza sativa s... [more]
C5XVD7_SORBI3.929e-834.17Putative uncharacterized protein Sb04g004110 OS=So... [more]
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BLAST of FG536280 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G32350.12.151e-2047.32| Symbols: | Regulator of Vps4 activity in the MV... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 29..39
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG536280 ID=FG536280; Name=FG536280; organism=Pisum sativum; type=EST; length=505bp
TAAACAAGACGAAGAGGAAAGAGTAATAGATAGATTACTGATGCACTACA
GCAAAAAGCCATCATCCATTGCTGGGCCTGAGAAAGCAAGAAGAAGGTCT
AGAAGTCGCCATGCACACCAAATGGATGAGGCACCTGATAAGACACCGGA
GACGGTCCCACGCGCACCTCGATCAGTTTCCCTTCCTCATGAACAATCAC
AAGAGATGGAAGTCAAGAAAGTGTTTACTCGAGCTGCTTCGTTTCAGCCG
GATAGATCAAAAGAAGCTCGACATGTGCATCCCAATTTACCCGAGTATGA
TGATTTAGCTGCTAGGCTTGCGTCCTTGAGAGGAACATAAGAGAGCCAAA
TAATATACATGAAAGAATACTCTTCTCTTATCAACAGAATTATGTGATCA
CCGTGTTTTACTATGATGTACCGTTAGGGTACTGATGAACAAGATTGCAT
GGTATGATGTTTTGTTAATTTGATTACAAATTGGTGACTATTCCAGAGCT
GTAGT
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