FG537261

EST Overview
NameFG537261
Unique NameFG537261
TypeEST
OrganismPisum sativum (pea)
Sequence length302
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of FG537261 vs. TrEMBL
Match: B9HF44_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_217280 PE=4 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 3.852e-32
Identity = 68/90 (75.56%), Postives = 80/90 (88.89%), Query Frame = -1
Query:   33 KVDKAGATALFQEPNMGSNNIGVVVNPVRLSTLPDFGTPQFVADKLLQAERRKESTNEAVVIAVEERSGKGGLQVYEFEYKIDSTRGGRR 302
            KVDKAGAT LF+E N GSNNIGVVV PVRL++L +FG+PQFVADKL+QAE++KEST +A VI+V ERSG GGLQVYEFEYK+DSTRGG +
Sbjct:   66 KVDKAGATVLFEEVNKGSNNIGVVVTPVRLASLDEFGSPQFVADKLIQAEKKKESTKDAEVISVAERSGHGGLQVYEFEYKVDSTRGGMK 155          
BLAST of FG537261 vs. TrEMBL
Match: B9T7K7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0080260 PE=4 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 5.031e-32
Identity = 68/88 (77.27%), Postives = 77/88 (87.50%), Query Frame = -1
Query:   39 KVDKAGATALFQEPNMGSNNIGVVVNPVRLSTLPDFGTPQFVADKLLQAERRKESTNEAVVIAVEERSGKGGLQVYEFEYKIDSTRGG 302
            KVDKAGAT LF+E N GSNNIGVVVNPVRL+TL +FGTPQFVADKL+QAE+RKEST +  +I V ER G GGLQVYEFEY++DSTRGG
Sbjct:  106 KVDKAGATVLFEEVNKGSNNIGVVVNPVRLATLGEFGTPQFVADKLIQAEKRKESTKDVELIGVAERPGHGGLQVYEFEYRVDSTRGG 193          
BLAST of FG537261 vs. TrEMBL
Match: B4FP87_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 4.709e-30
Identity = 66/90 (73.33%), Postives = 77/90 (85.56%), Query Frame = -1
Query:   33 KVDKAGATALFQEPNMGSNNIGVVVNPVRLSTLPDFGTPQFVADKLLQAERRKESTNEAVVIAVEERSGKGGLQVYEFEYKIDSTRGGRR 302
            KV+KAGATALFQ+   GSNNIGVVVNPVRL++L +FGTPQFVAD+LLQAE++KEST  A VI+V ERSG GGL VYE EY +DSTRGG +
Sbjct:  112 KVEKAGATALFQQEGKGSNNIGVVVNPVRLNSLAEFGTPQFVADRLLQAEKKKESTKSAEVISVGERSGHGGLTVYEIEYTLDSTRGGMK 201          
BLAST of FG537261 vs. TrEMBL
Match: C5Y8Q2_SORBI (Putative uncharacterized protein Sb06g017090 OS=Sorghum bicolor GN=Sb06g017090 PE=4 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.150e-30
Identity = 66/90 (73.33%), Postives = 77/90 (85.56%), Query Frame = -1
Query:   33 KVDKAGATALFQEPNMGSNNIGVVVNPVRLSTLPDFGTPQFVADKLLQAERRKESTNEAVVIAVEERSGKGGLQVYEFEYKIDSTRGGRR 302
            KV+KAGATALFQ+   GSNNIGVVVNPVRL++L +FGTPQFVAD+LLQAE++KEST  A VI+V ERSG GGL VYE EY +DSTRGG +
Sbjct:  112 KVEKAGATALFQQEGKGSNNIGVVVNPVRLNSLTEFGTPQFVADRLLQAEKKKESTKTAEVISVGERSGHGGLTVYEIEYTLDSTRGGMK 201          
BLAST of FG537261 vs. TrEMBL
Match: D7SWE5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_31.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00022331001 PE=4 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.370e-29
Identity = 63/90 (70.00%), Postives = 76/90 (84.44%), Query Frame = -1
Query:   33 KVDKAGATALFQEPNMGSNNIGVVVNPVRLSTLPDFGTPQFVADKLLQAERRKESTNEAVVIAVEERSGKGGLQVYEFEYKIDSTRGGRR 302
            KVDK GAT LF+E N G NN+GVVV+PVRL +L  FG+PQFVADK++QAE+RKEST +A +I V ERSG+GGLQVYEFEY +DSTRGG +
Sbjct:   96 KVDKGGATVLFEEENKGVNNVGVVVSPVRLESLKQFGSPQFVADKVIQAEKRKESTKDAELIGVAERSGQGGLQVYEFEYIVDSTRGGMK 185          
BLAST of FG537261 vs. TrEMBL
Match: Q01IY8_ORYSA (OSIGBa0102D10.5 protein OS=Oryza sativa GN=OSIGBa0102D10.5 PE=4 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.789e-29
Identity = 64/90 (71.11%), Postives = 76/90 (84.44%), Query Frame = -1
Query:   33 KVDKAGATALFQEPNMGSNNIGVVVNPVRLSTLPDFGTPQFVADKLLQAERRKESTNEAVVIAVEERSGKGGLQVYEFEYKIDSTRGGRR 302
            KV+KAGATALFQ+   GSNNIG+VVNPVRLSTL +FGTPQFVA++L+QAE++KEST  A VI+ EERSG  GL VYE EY +DSTRGG +
Sbjct:  122 KVEKAGATALFQQEGKGSNNIGIVVNPVRLSTLTEFGTPQFVAERLIQAEKKKESTKSAEVISAEERSGHDGLTVYEIEYLLDSTRGGMK 211          
BLAST of FG537261 vs. TrEMBL
Match: D7LJM1_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_481771 PE=4 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.789e-29
Identity = 67/88 (76.14%), Postives = 75/88 (85.23%), Query Frame = -1
Query:   39 KVDKAGATALFQEPNMGSNNIGVVVNPVRLSTLPDFGTPQFVADKLLQAERRKESTNEAVVIAVEERSGKGGLQVYEFEYKIDSTRGG 302
            KVDKAGA ALF+EPN GSNNIGVVV+PVR+ +L  FGTPQFVADKL+ AE+RKEST E  V++V ERSG  G QVYEFEYKIDSTRGG
Sbjct:  103 KVDKAGANALFEEPNNGSNNIGVVVSPVRIKSLDQFGTPQFVADKLINAEKRKESTKEVEVVSVGERSGL-GQQVYEFEYKIDSTRGG 189          
BLAST of FG537261 vs. TrEMBL
Match: B8AU11_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_15970 PE=4 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.789e-29
Identity = 64/90 (71.11%), Postives = 76/90 (84.44%), Query Frame = -1
Query:   33 KVDKAGATALFQEPNMGSNNIGVVVNPVRLSTLPDFGTPQFVADKLLQAERRKESTNEAVVIAVEERSGKGGLQVYEFEYKIDSTRGGRR 302
            KV+KAGATALFQ+   GSNNIG+VVNPVRLSTL +FGTPQFVA++L+QAE++KEST  A VI+ EERSG  GL VYE EY +DSTRGG +
Sbjct:  122 KVEKAGATALFQQEGKGSNNIGIVVNPVRLSTLTEFGTPQFVAERLIQAEKKKESTKSAEVISAEERSGHDGLTVYEIEYLLDSTRGGMK 211          
BLAST of FG537261 vs. TrEMBL
Match: A5BMR5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011517 PE=4 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 4.407e-28
Identity = 61/90 (67.78%), Postives = 74/90 (82.22%), Query Frame = -1
Query:   33 KVDKAGATALFQEPNMGSNNIGVVVNPVRLSTLPDFGTPQFVADKLLQAERRKESTNEAVVIAVEERSGKGGLQVYEFEYKIDSTRGGRR 302
            +VDK GAT LF+E N G NN+GVVV+PVRL +L  FG+PQFVADK++QAE+RKEST +  +I V ERS +GGLQVYEFEY IDSTRGG +
Sbjct:   43 EVDKGGATVLFEEENKGVNNVGVVVSPVRLESLKQFGSPQFVADKVIQAEKRKESTKDVELIGVAERSSQGGLQVYEFEYIIDSTRGGMK 132          
BLAST of FG537261 vs. TrEMBL
Match: D5AAL9_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.561e-25
Identity = 56/93 (60.22%), Postives = 76/93 (81.72%), Query Frame = -1
Query:   24 KVDKAGATALFQEPNMGSNNIGVVVNPVRLSTLPDFGTPQFVADKLLQAERRKESTNEAVVIAVEERSGKGGLQVYEFEYKIDSTRGGRRSMS 302
            KVDKAGAT LF++P++ +NNIGVVVNPVR+S+L DFGTPQ VADKLL+AER+K STN+  +I + E++  G + +YE EY +DS+RG +R +S
Sbjct:  160 KVDKAGATVLFEDPDVRTNNIGVVVNPVRISSLKDFGTPQDVADKLLKAERKKPSTNDVQLIRIAEKAIHGDIPLYELEYSLDSSRGIKRVLS 252          
BLAST of FG537261 vs. SwissProt
Match: PPD2_ARATH (PsbP domain-containing protein 2, chloroplastic OS=Arabidopsis thaliana GN=PPD2 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 8.093e-29
Identity = 64/88 (72.73%), Postives = 75/88 (85.23%), Query Frame = -1
Query:   39 KVDKAGATALFQEPNMGSNNIGVVVNPVRLSTLPDFGTPQFVADKLLQAERRKESTNEAVVIAVEERSGKGGLQVYEFEYKIDSTRGG 302
            KV+KAGA ALF+E N GSNNIGVVV+PVR+ +L  FG+PQFVADKL+ AE+RKEST EA V++V ER+G  G QVYEFEYKIDSTRGG
Sbjct:   95 KVEKAGANALFEELNNGSNNIGVVVSPVRIKSLDQFGSPQFVADKLINAEKRKESTKEAEVVSVGERAGL-GQQVYEFEYKIDSTRGG 181          
BLAST of FG537261 vs. TAIR peptide
Match: AT2G28605.1 (| Symbols: | Photosystem II reaction center PsbP family protein | chr2:12254911-12255689 FORWARD LENGTH=232)

HSP 1 Score: 125.561 bits (314), Expect = 6.378e-30
Identity = 64/88 (72.73%), Postives = 75/88 (85.23%), Query Frame = -1
Query:   39 KVDKAGATALFQEPNMGSNNIGVVVNPVRLSTLPDFGTPQFVADKLLQAERRKESTNEAVVIAVEERSGKGGLQVYEFEYKIDSTRGG 302
            KV+KAGA ALF+E N GSNNIGVVV+PVR+ +L  FG+PQFVADKL+ AE+RKEST EA V++V ER+G  G QVYEFEYKIDSTRGG
Sbjct:   95 KVEKAGANALFEELNNGSNNIGVVVSPVRIKSLDQFGSPQFVADKLINAEKRKESTKEAEVVSVGERAGL-GQQVYEFEYKIDSTRGG 181          
The following BLAST results are available for this feature:
BLAST of FG537261 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9HF44_POPTR3.852e-3275.56Predicted protein (Fragment) OS=Populus trichocarp... [more]
B9T7K7_RICCO5.031e-3277.27Putative uncharacterized protein OS=Ricinus commun... [more]
B4FP87_MAIZE4.709e-3073.33Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
C5Y8Q2_SORBI6.150e-3073.33Putative uncharacterized protein Sb06g017090 OS=So... [more]
D7SWE5_VITVI1.370e-2970.00Whole genome shotgun sequence of line PN40024, sca... [more]
Q01IY8_ORYSA1.789e-2971.11OSIGBa0102D10.5 protein OS=Oryza sativa GN=OSIGBa0... [more]
D7LJM1_ARALY1.789e-2976.14Putative uncharacterized protein OS=Arabidopsis ly... [more]
B8AU11_ORYSI1.789e-2971.11Putative uncharacterized protein OS=Oryza sativa s... [more]
A5BMR5_VITVI4.407e-2867.78Putative uncharacterized protein OS=Vitis vinifera... [more]
D5AAL9_PICSI4.561e-2560.22Putative uncharacterized protein OS=Picea sitchens... [more]
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BLAST of FG537261 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
PPD2_ARATH8.093e-2972.73PsbP domain-containing protein 2, chloroplastic OS... [more]
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BLAST of FG537261 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G28605.16.378e-3072.73| Symbols: | Photosystem II reaction center PsbP ... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 58..70
score
IPR002683Photosystem II PsbP, oxygen evolving complexPFAMPF01789PsbPcoord: 2..94
score: 2.1
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichGENE3D3.40.1000.10no descriptioncoord: 2..95
score: 1.7
IPR016124Mog1/PsbP/DUF1795, alpha/beta/alpha sandwichSUPERFAMILY55724Mog1p/PsbP-likecoord: 1..100
score: 7.1

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG537261 ID=FG537261; Name=FG537261; organism=Pisum sativum; type=EST; length=302bp
CTACCACTCTCTTCCACAAACTCACTCATGCTTCTCCTTCCTCCCCGAGT
ACTATCAATCTTGTATTCAAATTCATAAACTTGCAAACCTCCTTTCCCTG
ATCTTTCTTCAACTGCAATCACCACAGCTTCATTTGTACTTTCCTTGCGT
CTTTCAGCTTGTAAAAGCTTATCAGCAACAAATTGAGGAGTCCCAAAGTC
TGGAAGAGTTGAAAGACGAACGGGGTTTACCACAACACCAATATTGTTAC
TTCCCATATTTGGTTCTTGGAACAACGCTGTAGCCCCAGCTTTATCAACC
TT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0009654photosystem II oxygen evolving complex
GO:0019898extrinsic component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0015979photosynthesis
Vocabulary: INTERPRO
TermDefinition
IPR002683PsbP_C
IPR016123Mog1/PsbP_a/b/a-sand
IPR016124Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich