FG537355
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FG537355 vs. TrEMBL
Match: C6T7X1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.253e-54 Identity = 109/132 (82.58%), Postives = 119/132 (90.15%), Query Frame = 2 Query: 2 KHNSRKQGELKERLKHSYSALKREFRQTFEKPNSDVGELSDGEKNLMYEQKASAWYQVTYHPKWVKKTLDLQIKSSDDQEADSSLRNVMLSFPWIAVDYLARSKIRNR--KVGSFDSTKPVDSLAKYLSERL 391 K+NSRKQGELKERLKHSYSALK+EFR TFEK NSDVGELS+ EKNL YEQKASAWYQVTYHP+WVKK+LDLQ KSS++QEADS VMLSFPWIAVDYLAR+KIR R + G+FDSTKPVDSLAKYLSERL Sbjct: 159 KYNSRKQGELKERLKHSYSALKKEFRHTFEKLNSDVGELSEEEKNLFYEQKASAWYQVTYHPEWVKKSLDLQDKSSENQEADSLGSTVMLSFPWIAVDYLARTKIRQRHQRCGNFDSTKPVDSLAKYLSERL 290
BLAST of FG537355 vs. TrEMBL
Match: B9HA49_POPTR (Rna-dependent RNA polymerase OS=Populus trichocarpa GN=RDR906 PE=4 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.030e-40 Identity = 81/130 (62.31%), Postives = 105/130 (80.77%), Query Frame = 2 Query: 2 KHNSRKQGELKERLKHSYSALKREFRQTFEKPNSDVGELSDGEKNLMYEQKASAWYQVTYHPKWVKKTLDLQIKSSDDQEADSSLRNVMLSFPWIAVDYLARSKIRNRKVGSFDSTKPVDSLAKYLSERL 391 K +SRKQG+LKERLKHSY+ LKREFRQ FEK + D G+L D EKN++YE+KASAWYQVTYHP W++K+L+L Q++D + +VMLSF WIA DYLAR KIR+ ++G+ DS KPV+SLAKYL++R+ Sbjct: 1076 KGSSRKQGDLKERLKHSYNCLKREFRQVFEKMDLDFGQLDDDEKNMLYERKASAWYQVTYHPHWIQKSLEL-------QDSDGAGISVMLSFAWIAADYLARIKIRHSRIGNVDSAKPVNSLAKYLADRM 1198
BLAST of FG537355 vs. TrEMBL
Match: B9IKW9_POPTR (Rna-dependent RNA polymerase OS=Populus trichocarpa GN=RDR905 PE=4 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.756e-40 Identity = 82/130 (63.08%), Postives = 104/130 (80.00%), Query Frame = 2 Query: 2 KHNSRKQGELKERLKHSYSALKREFRQTFEKPNSDVGELSDGEKNLMYEQKASAWYQVTYHPKWVKKTLDLQIKSSDDQEADSSLRNVMLSFPWIAVDYLARSKIRNRKVGSFDSTKPVDSLAKYLSERL 391 K++SRKQGELK+RLKHSY++LK+EFRQ FEK + + +L DGEKN +YEQKASAWYQV YHP WVKK+L+L Q+ D + +VMLSF WIA DYLAR KIR+R+ G+ DS KPV+SLAKYL++R+ Sbjct: 1078 KYSSRKQGELKDRLKHSYNSLKKEFRQIFEKMDLEFEQLEDGEKNKLYEQKASAWYQVVYHPHWVKKSLEL-------QDPDGAGTSVMLSFAWIAADYLARIKIRHRETGNVDSAKPVNSLAKYLADRM 1200
BLAST of FG537355 vs. TrEMBL
Match: Q9SG02_ARATH (Putative RNA-directed RNA polymerase; 73997-69985 OS=Arabidopsis thaliana GN=T9C5.95 PE=4 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.942e-39 Identity = 81/130 (62.31%), Postives = 102/130 (78.46%), Query Frame = 2 Query: 2 KHNSRKQGELKERLKHSYSALKREFRQTFEKPNSDVGELSDGEKNLMYEQKASAWYQVTYHPKWVKKTLDLQIKSSDDQEADSSLRNVMLSFPWIAVDYLARSKIRNRKVGSFDSTKPVDSLAKYLSERL 391 K+ S+KQGELKERLKHSY++LK+EFR+ FE+ D LS+ EKN++YE+KASAWY VTYHP+WVKK+L+L Q+ D S MLSF WIA DYLAR KIR+R++GS DS KPVDSLAK+L++RL Sbjct: 1074 KYTSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEWVKKSLEL-------QDPDESSHAAMLSFAWIAADYLARIKIRSREMGSIDSAKPVDSLAKFLAQRL 1196
BLAST of FG537355 vs. TrEMBL
Match: Q9LKP0_ARATH (RNA-dependent RNA polymerase OS=Arabidopsis thaliana GN=SDE1 PE=4 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.942e-39 Identity = 81/130 (62.31%), Postives = 102/130 (78.46%), Query Frame = 2 Query: 2 KHNSRKQGELKERLKHSYSALKREFRQTFEKPNSDVGELSDGEKNLMYEQKASAWYQVTYHPKWVKKTLDLQIKSSDDQEADSSLRNVMLSFPWIAVDYLARSKIRNRKVGSFDSTKPVDSLAKYLSERL 391 K+ S+KQGELKERLKHSY++LK+EFR+ FE+ D LS+ EKN++YE+KASAWY VTYHP+WVKK+L+L Q+ D S MLSF WIA DYLAR KIR+R++GS DS KPVDSLAK+L++RL Sbjct: 1074 KYTSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEWVKKSLEL-------QDPDESSHAAMLSFAWIAADYLARIKIRSREMGSIDSAKPVDSLAKFLAQRL 1196
BLAST of FG537355 vs. TrEMBL
Match: D7SUT9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035851001 PE=4 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.804e-38 Identity = 80/130 (61.54%), Postives = 101/130 (77.69%), Query Frame = 2 Query: 2 KHNSRKQGELKERLKHSYSALKREFRQTFEKPNSDVGELSDGEKNLMYEQKASAWYQVTYHPKWVKKTLDLQIKSSDDQEADSSLRNVMLSFPWIAVDYLARSKIRNRKVGSFDSTKPVDSLAKYLSERL 391 K+ SRKQGEL ERLKH+YS+LK+EFRQ FEK NSD +L+D EKN +YEQKASAWYQVTYHP WVKK+L+LQ + D+ + VMLSF WI DYLAR KIR + G+ DS+KP++SLA++L +R+ Sbjct: 912 KYKSRKQGELTERLKHAYSSLKKEFRQIFEKMNSDFDQLTDDEKNRLYEQKASAWYQVTYHPTWVKKSLELQ--NPDEVFGE----RVMLSFAWITADYLARIKIRRKGTGNVDSSKPINSLARFLVDRI 1035
BLAST of FG537355 vs. TrEMBL
Match: D7LSJ5_ARALY (RNA-dependent RNA polymerase 6 OS=Arabidopsis lyrata subsp. lyrata GN=RDR6 PE=4 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.100e-37 Identity = 80/130 (61.54%), Postives = 102/130 (78.46%), Query Frame = 2 Query: 2 KHNSRKQGELKERLKHSYSALKREFRQTFEKPNSDVGELSDGEKNLMYEQKASAWYQVTYHPKWVKKTLDLQIKSSDDQEADSSLRNVMLSFPWIAVDYLARSKIRNRKVGSFDSTKPVDSLAKYLSERL 391 K+ S+KQ +LKERLKHSY++LK+EFR+ FE+ D ELS+ EKN++YE+KASAWY VTYHPKWVKK+L+LQ D E S VMLSF WIA DYLA+ KIR+ ++G+ DS KPVDSLAK+L++RL Sbjct: 1074 KYTSKKQCDLKERLKHSYNSLKKEFRKVFEETILDHEELSEEEKNILYEKKASAWYHVTYHPKWVKKSLELQ----DPDEPSS--HAVMLSFAWIAADYLAKIKIRSGEMGNIDSAKPVDSLAKFLAQRL 1197
BLAST of FG537355 vs. TrEMBL
Match: B9RP51_RICCO (RNA-dependent RNA polymerase, putative OS=Ricinus communis GN=RCOM_0924060 PE=4 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 5.288e-37 Identity = 80/130 (61.54%), Postives = 98/130 (75.38%), Query Frame = 2 Query: 2 KHNSRKQGELKERLKHSYSALKREFRQTFEKPNSDVGELSDGEKNLMYEQKASAWYQVTYHPKWVKKTLDLQIKSSDDQEADSSLRNVMLSFPWIAVDYLARSKIRNRKVGSFDSTKPVDSLAKYLSERL 391 K NSRKQGELKERLK SY +LK+EFRQ FEK +SD +L++ EKNL+YEQKASAWYQV YHPKWV K+++L QE D++ MLSF WIA DYLAR KIR R D++KPV+SL KYL++R+ Sbjct: 1081 KCNSRKQGELKERLKQSYHSLKKEFRQVFEKMDSDFEQLTEDEKNLLYEQKASAWYQVAYHPKWVNKSMEL-------QEPDAAGCASMLSFAWIAADYLARIKIRCRGFDGVDTSKPVNSLVKYLADRI 1203
BLAST of FG537355 vs. TrEMBL
Match: D5FJ44_NICGU (RNA-dependent RNA polymerase 6 OS=Nicotiana glutinosa GN=RDR6 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.440e-34 Identity = 73/130 (56.15%), Postives = 96/130 (73.85%), Query Frame = 2 Query: 2 KHNSRKQGELKERLKHSYSALKREFRQTFEKPNSDVGELSDGEKNLMYEQKASAWYQVTYHPKWVKKTLDLQIKSSDDQEADSSLRNVMLSFPWIAVDYLARSKIRNRKVGSFDSTKPVDSLAKYLSERL 391 K++++KQGELKERLKH+Y+ L++EFR FE+ D L D EKN MYE+KASAWYQVTYHP WV ++L+LQI D+ VMLSF WIA DYLAR KIR+R + DSTKP++SL +YL++++ Sbjct: 1075 KYSAKKQGELKERLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYHPHWVARSLELQI-------PDAVSSTVMLSFAWIAADYLARIKIRHRGLPYSDSTKPINSLGRYLADKI 1197
BLAST of FG537355 vs. TrEMBL
Match: A9CRC9_TOBAC (RNA-dependent RNA polymerase 6 OS=Nicotiana tabacum GN=NtRDR6 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.881e-34 Identity = 72/130 (55.38%), Postives = 96/130 (73.85%), Query Frame = 2 Query: 2 KHNSRKQGELKERLKHSYSALKREFRQTFEKPNSDVGELSDGEKNLMYEQKASAWYQVTYHPKWVKKTLDLQIKSSDDQEADSSLRNVMLSFPWIAVDYLARSKIRNRKVGSFDSTKPVDSLAKYLSERL 391 K++++KQGELKERLKH+Y+ L++EFR FE+ + D L D EKN MYE+KASAWYQVTYHP WV ++L+LQ+ D+ VMLSF WIA DYLAR KIR+R++ DSTKP++SL +YL + + Sbjct: 1075 KYSAKKQGELKERLKHAYNTLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYHPHWVARSLELQL-------PDAVSNTVMLSFAWIAADYLARIKIRHRRLQYSDSTKPINSLGRYLVDNI 1197
BLAST of FG537355 vs. SwissProt
Match: SHL2_ORYSJ (Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica GN=SHL2 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.761e-31 Identity = 70/130 (53.85%), Postives = 91/130 (70.00%), Query Frame = 2 Query: 2 KHNSRKQGELKERLKHSYSALKREFRQTFEKPNSDVGELSDGEKNLMYEQKASAWYQVTYHPKWVKKTLDLQIKSSDDQEADSSLRNVMLSFPWIAVDYLARSKIRNRKVGSFDSTKPVDSLAKYLSERL 391 K++S+KQG++K+RLK +YSAL++EF+ TFE SD E+ D EKNL+YE KASAWYQVTYHPKWV+K+ I D +E +S LSF WI VDYLAR K+R + KPV+ LA Y+SER+ Sbjct: 1096 KNSSKKQGDIKDRLKTAYSALRKEFKSTFESIASDQCEIGDDEKNLLYEMKASAWYQVTYHPKWVEKSRG--ILGPDGEEIPAS-----LSFAWIPVDYLARIKLRCHGKVRVEGQKPVERLAAYISERI 1218
BLAST of FG537355 vs. TAIR peptide
Match: AT3G49500.1 (| Symbols: RDR6, SGS2, SDE1 | RNA-dependent RNA polymerase 6 | chr3:18349193-18353205 REVERSE LENGTH=1196) HSP 1 Score: 165.622 bits (418), Expect = 1.568e-41 Identity = 81/130 (62.31%), Postives = 102/130 (78.46%), Query Frame = 2 Query: 2 KHNSRKQGELKERLKHSYSALKREFRQTFEKPNSDVGELSDGEKNLMYEQKASAWYQVTYHPKWVKKTLDLQIKSSDDQEADSSLRNVMLSFPWIAVDYLARSKIRNRKVGSFDSTKPVDSLAKYLSERL 391 K+ S+KQGELKERLKHSY++LK+EFR+ FE+ D LS+ EKN++YE+KASAWY VTYHP+WVKK+L+L Q+ D S MLSF WIA DYLAR KIR+R++GS DS KPVDSLAK+L++RL Sbjct: 1074 KYTSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEWVKKSLEL-------QDPDESSHAAMLSFAWIAADYLARIKIRSREMGSIDSAKPVDSLAKFLAQRL 1196 The following BLAST results are available for this feature:
BLAST of FG537355 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of FG537355 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 1
BLAST of FG537355 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FG537355 ID=FG537355; Name=FG537355; organism=Pisum sativum; type=EST; length=558bpback to top |