FG537593

EST Overview
NameFG537593
Unique NameFG537593
TypeEST
OrganismPisum sativum (pea)
Sequence length555
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of FG537593 vs. TrEMBL
Match: C6EUD3_SOYBN (RING finger protein OS=Glycine max GN=RFP1 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.418e-26
Identity = 68/121 (56.20%), Postives = 83/121 (68.60%), Query Frame = 2
Query:    2 SSKLDARRCYSMGSYQYVVGNSELRVTLDALNHESKVHHDDRRMNKGIENSENLCV--ESDLEGKKISNVSKGESFSISKIWLWPRKGKFPSSSLEAHNGMALPSYLNKDLQHHGMRKTDG 358
            SS LDARRCYSMGSYQYVVGNS+LRVTL   NH+        R+ KG+E  +      E D+E KKIS+VSKG+SFS+SKIWLWP+KGK P +SL+   G  +PSYLN       MR+ +G
Sbjct:  277 SSNLDARRCYSMGSYQYVVGNSDLRVTL---NHDEIGKGQVTRLTKGMELDDGKVSVEEGDVEAKKISSVSKGDSFSVSKIWLWPKKGKLP-TSLDGQFGRPMPSYLNTGFPR--MREPEG 391          
BLAST of FG537593 vs. TrEMBL
Match: A5ATC1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043284 PE=4 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 7.779e-25
Identity = 66/116 (56.90%), Postives = 82/116 (70.69%), Query Frame = 2
Query:    2 SSKLDARRCYSMGSYQYVVGNSELRVTLDALNHESKVHHDDRRMNKGIENSENLCVESDLEGKKISNVSKGESFSISKIWLWPRKGKFPSSSLEAHNGMALPSYLNKDLQHHGMRK 349
            SS LDARRCYSMGS+QYVVG+S LRV   ALNHE +  H D ++ KGIEN+ N  +  + EG + S V+KG+S+S+SKIWLW +KGKFPSSS     GM  PS LN DL   G ++
Sbjct:  981 SSNLDARRCYSMGSFQYVVGDSILRV---ALNHEQQ--HPDGKIVKGIENNANPSINEETEGTRNSFVTKGDSYSVSKIWLWSKKGKFPSSSDNTQTGM--PS-LNVDLPWMGRKQ 1088          
BLAST of FG537593 vs. TrEMBL
Match: B9RUC1_RICCO (Ring finger protein, putative OS=Ricinus communis GN=RCOM_0851740 PE=4 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 9.509e-23
Identity = 62/109 (56.88%), Postives = 77/109 (70.64%), Query Frame = 2
Query:    2 SSKLDARRCYSMGSYQYVVGNSELRVTLDALNHESKVHHDDRRMNKGIENSENLCVESDLEGKKISNVSKGESFSISKIWLWPRKGKFPSSSLEAHNGMALPSYLNKDL 328
            SS LDARRC+SMGSYQYV+G+S+LRV L    H   V     +  KG + + ++ V+ DLEGKKIS V+K ESFS+SKIWLW +KGKF SSS +A  GM  PS L+ DL
Sbjct:  267 SSNLDARRCFSMGSYQYVLGDSDLRVALCTDRHARSV-----KPEKGNDQNGSVLVDGDLEGKKISRVTKRESFSVSKIWLWSKKGKF-SSSTDAQMGM--PSSLSLDL 367          
BLAST of FG537593 vs. TrEMBL
Match: B9IJM6_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_258699 PE=4 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.739e-19
Identity = 49/88 (55.68%), Postives = 61/88 (69.32%), Query Frame = 2
Query:    2 SSKLDARRCYSMGSYQYVVGNSELRVTLDALNHESKVHHDDRRMNKGIENSENLCVESDLEGKKISNVSKGESFSISKIWLWPRKGKF 265
            SS LDARRC+SMGSYQYV+ +++LRV L    H   + H      +G E   NL V+ DLE  KIS++ KGESFS+SKIWLW +KGKF
Sbjct:  192 SSNLDARRCFSMGSYQYVLDDTDLRVALGKERHSHDITHA-----RGTEQDVNLSVDRDLEENKISSLIKGESFSVSKIWLWRKKGKF 274          
BLAST of FG537593 vs. TrEMBL
Match: B9GH92_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_797835 PE=4 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.331e-19
Identity = 55/100 (55.00%), Postives = 71/100 (71.00%), Query Frame = 2
Query:    2 SSKLDARRCYSMGSYQYVVGNSELRVTLDALNHESKVHHDDRRMNKGIENSENLCVESDLEGKKISNVSKGESFSISKIWLW-PRKGKFPSSSLEAHNGM 298
            SS LDARRC+SMGSYQYV+G+++LRV L      ++    D +  +G E   NL V+ DLE  KIS++S+GESFS+SKIWLW  +KGKF SSS +A  GM
Sbjct:  223 SSNLDARRCFSMGSYQYVLGDTDLRVGLS-----NERQSRDIKPARGTEQKVNLSVDGDLEENKISSLSQGESFSVSKIWLWRNKKGKFSSSS-DAPMGM 316          
BLAST of FG537593 vs. TrEMBL
Match: D7SHV3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00007793001 PE=4 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.203e-17
Identity = 52/102 (50.98%), Postives = 68/102 (66.67%), Query Frame = 2
Query:    2 SSKLDARRCYSMGSYQYVVGNSELRVTLDALNHESKVHHDDRRMNKGIENSENLCVESDLEGKKISNVSKGESFSISKIWLWPRKGKFPSSSLEAHNGMALP 307
            SS LDARRCYSMG  QYVVG+S L+V   AL+H++    +++      ++        D EGKKIS+  +GESFS+SKIWLWP+K K PSSS + H  M+LP
Sbjct:  704 SSYLDARRCYSMGPCQYVVGDSNLQV---ALSHDNGASSEEKHAKARDQHGNCSTDHEDAEGKKISSRIRGESFSVSKIWLWPKKNKVPSSS-DPH--MSLP 799          
BLAST of FG537593 vs. TrEMBL
Match: B9RB58_RICCO (Ring finger protein, putative OS=Ricinus communis GN=RCOM_1511820 PE=4 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.052e-17
Identity = 47/91 (51.65%), Postives = 62/91 (68.13%), Query Frame = 2
Query:    5 SKLDARRCYSMGSYQYVVGNSELRVTLDALNHESKVHHDDRRMNKGIENSENLCVESDLEGKKISNVSKGESFSISKIWLWPRKGKFPSSS 277
            S LDARRCYS+G+ QYVVG+S L+V L         HHD   +    E+S    V+ D+EGKKI+  ++G+SFS+SKIWLW +K KFPSS+
Sbjct:  266 SNLDARRCYSLGTVQYVVGDSNLQVALS--------HHDSINVRGEYESS---AVDGDVEGKKINGRTRGDSFSVSKIWLWSKKNKFPSST 345          
BLAST of FG537593 vs. TrEMBL
Match: D7MJA4_ARALY (Zinc finger family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_493966 PE=4 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.970e-17
Identity = 54/112 (48.21%), Postives = 68/112 (60.71%), Query Frame = 2
Query:    2 SSKLDARRCYSMGSYQYVVGNSELRVTLDALNHESKVHHDDR--RMNKGIENSENLCVESDLEGKKISNVSKGESFSISKIWLWPRKGKF--------PSSSLEAHNGMALP 307
            SS LDARRC+SMGSYQY++GNSEL+V             +DR  R+    + SE     S  + KKI++V+KGESFS+SKIWLWP+K KF        PSSSL   +   LP
Sbjct:  261 SSNLDARRCFSMGSYQYILGNSELKVPFA----------NDRLPRLKPQDKESEQTGNSSSEDNKKINSVAKGESFSVSKIWLWPKKDKFSSDAQRRLPSSSLNVDDLPKLP 362          
BLAST of FG537593 vs. TrEMBL
Match: B9S4M2_RICCO (Ring finger protein, putative OS=Ricinus communis GN=RCOM_0993520 PE=4 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.588e-15
Identity = 47/92 (51.09%), Postives = 56/92 (60.87%), Query Frame = 2
Query:    2 SSKLDARRCYSMGSYQYVVGNSELRVTLDALNHESKVHHDDRRMNKGIENSENLCVESDLEGKKISNVSKGESFSISKIWLWPRKGKFPSSS 277
            SS LDARRC+SMGSYQYVV +  L+V L    +         +   G   + +     D EGKKI+  SKGESFS+SKIW W RKGK PSSS
Sbjct:  261 SSNLDARRCFSMGSYQYVVADLNLQVALCPGRNVGTGSFKLVKSKNGQNGNTSSNDIGDAEGKKINIRSKGESFSVSKIWQWSRKGKLPSSS 352          
BLAST of FG537593 vs. TrEMBL
Match: B6TV57_MAIZE (RING-H2 finger protein ATL5I OS=Zea mays PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.245e-14
Identity = 47/103 (45.63%), Postives = 62/103 (60.19%), Query Frame = 2
Query:    2 SSKLDARRCYSMGSYQYVVGNSELRVTLDALNHESKVHHDDRRMNKGIENSENLCVESDLEGKKISNVSKGESFSISKIWLWPR-KGKFPSSSLEAHNGMALP 307
            SS+LD RRC+SMG+YQYV+G SELRV L        + +D     +G+    +      +EGKKI   +KGESFS+SKIW W   KGK P+ S E  +  +LP
Sbjct:  307 SSRLDGRRCFSMGTYQYVLGTSELRVAL----QPGCIRNDTGGAMRGMPPGLSSINADIMEGKKICARNKGESFSVSKIWQWSNLKGKLPAGSDECSDAGSLP 405          
BLAST of FG537593 vs. SwissProt
Match: ATL46_ARATH (RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.512e-18
Identity = 57/129 (44.19%), Postives = 73/129 (56.59%), Query Frame = 2
Query:    2 SSKLDARRCYSMGSYQYVVGNSELRVTLDALNHESKVHHDDR--RMNKGIENSENLCVESDLEGKKISNVSKGESFSISKIWLWPRKGKF--------PSSSLEAHNGMALPSYLNKDLQHHGMRKTDG 358
            SS LDARRC+SMGSYQY++GNSEL+V             +DR  R+    + SE     S  + KKI+ V+KGESFS+SKIWLWP+K KF        PSSSL   +   LP      ++ H   + DG
Sbjct:  262 SSNLDARRCFSMGSYQYILGNSELKVPFA----------NDRLPRLKPQDKESEQTGNSSSEDNKKINTVAKGESFSVSKIWLWPKKDKFSSDAQRRLPSSSLNVDDLPKLPW-----MEEHKKLENDG 375          
BLAST of FG537593 vs. SwissProt
Match: ATL47_ARATH (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.150e-13
Identity = 44/92 (47.83%), Postives = 53/92 (57.61%), Query Frame = 2
Query:    2 SSKLDARRCYSMGSYQYVVGNSELRVTLDALNHESKVHHDDRRMNKGIENSENLCVESDLEGKKISNVSKGESFSISKIWLWPRK-GKFPSS 274
            SS LD RRC+SMGSYQY+V  S+L V L                     N+E L    D+EGKKI+  SKGESFS+SKIW W  K  KFP++
Sbjct:  261 SSSLDNRRCFSMGSYQYIVAESDLVVAL-------------------CPNNEGLKNNKDVEGKKINMRSKGESFSVSKIWQWSNKRSKFPNN 333          
BLAST of FG537593 vs. TAIR peptide
Match: AT5G40250.1 (| Symbols: | RING/U-box superfamily protein | chr5:16086056-16087186 FORWARD LENGTH=376)

HSP 1 Score: 90.8929 bits (224), Expect = 4.853e-19
Identity = 57/129 (44.19%), Postives = 73/129 (56.59%), Query Frame = 2
Query:    2 SSKLDARRCYSMGSYQYVVGNSELRVTLDALNHESKVHHDDR--RMNKGIENSENLCVESDLEGKKISNVSKGESFSISKIWLWPRKGKF--------PSSSLEAHNGMALPSYLNKDLQHHGMRKTDG 358
            SS LDARRC+SMGSYQY++GNSEL+V             +DR  R+    + SE     S  + KKI+ V+KGESFS+SKIWLWP+K KF        PSSSL   +   LP      ++ H   + DG
Sbjct:  262 SSNLDARRCFSMGSYQYILGNSELKVPFA----------NDRLPRLKPQDKESEQTGNSSSEDNKKINTVAKGESFSVSKIWLWPKKDKFSSDAQRRLPSSSLNVDDLPKLPW-----MEEHKKLENDG 375          
BLAST of FG537593 vs. TAIR peptide
Match: AT1G23980.1 (| Symbols: | RING/U-box superfamily protein | chr1:8484879-8485988 REVERSE LENGTH=369)

HSP 1 Score: 76.2554 bits (186), Expect = 1.237e-14
Identity = 44/92 (47.83%), Postives = 53/92 (57.61%), Query Frame = 2
Query:    2 SSKLDARRCYSMGSYQYVVGNSELRVTLDALNHESKVHHDDRRMNKGIENSENLCVESDLEGKKISNVSKGESFSISKIWLWPRK-GKFPSS 274
            SS LD RRC+SMGSYQY+V  S+L V L                     N+E L    D+EGKKI+  SKGESFS+SKIW W  K  KFP++
Sbjct:  261 SSSLDNRRCFSMGSYQYIVAESDLVVAL-------------------CPNNEGLKNNKDVEGKKINMRSKGESFSVSKIWQWSNKRSKFPNN 333          
BLAST of FG537593 vs. TAIR peptide
Match: AT4G30400.1 (| Symbols: | RING/U-box superfamily protein | chr4:14867068-14868486 FORWARD LENGTH=472)

HSP 1 Score: 51.2174 bits (121), Expect = 4.261e-7
Identity = 41/128 (32.03%), Postives = 58/128 (45.31%), Query Frame = 2
Query:    2 SSKLDARRCYSMGSYQYVVG-NSELRVTLDALNHESKVH----HDDRRMNKGIENSENLCVESD-----LEGKKISNVSKGESFSISKIWLWPRK-------GKFPSSSLEAHNGMALPSYLNKDLQH 334
            SS LD RRC+SMGSY+Y++   + L+V +      SK      H       G + +  L          +E     NV + ESFS+SKIWL  +K       GK  SS + + +G A    L+    H
Sbjct:  292 SSSLDERRCFSMGSYEYIMDEETTLKVHVSTKKQSSKNRGLPGHRTAMSECGFDPTGRLKFSGSGSMRIVEEAAEKNVVERESFSVSKIWLRGKKEKHSKVQGKEDSSLVSSSSGRAFSFRLSNQRNH 419          
The following BLAST results are available for this feature:
BLAST of FG537593 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6EUD3_SOYBN2.418e-2656.20RING finger protein OS=Glycine max GN=RFP1 PE=2 SV... [more]
A5ATC1_VITVI7.779e-2556.90Putative uncharacterized protein OS=Vitis vinifera... [more]
B9RUC1_RICCO9.509e-2356.88Ring finger protein, putative OS=Ricinus communis ... [more]
B9IJM6_POPTR3.739e-1955.68Predicted protein (Fragment) OS=Populus trichocarp... [more]
B9GH92_POPTR8.331e-1955.00Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7SHV3_VITVI1.203e-1750.98Whole genome shotgun sequence of line PN40024, sca... [more]
B9RB58_RICCO2.052e-1751.65Ring finger protein, putative OS=Ricinus communis ... [more]
D7MJA4_ARALY5.970e-1748.21Zinc finger family protein OS=Arabidopsis lyrata s... [more]
B9S4M2_RICCO5.588e-1551.09Ring finger protein, putative OS=Ricinus communis ... [more]
B6TV57_MAIZE1.245e-1445.63RING-H2 finger protein ATL5I OS=Zea mays PE=2 SV=1[more]
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BLAST of FG537593 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
ATL46_ARATH4.512e-1844.19RING-H2 finger protein ATL46 OS=Arabidopsis thalia... [more]
ATL47_ARATH1.150e-1347.83RING-H2 finger protein ATL47 OS=Arabidopsis thalia... [more]
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BLAST of FG537593 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G40250.14.853e-1944.19| Symbols: | RING/U-box superfamily protein | chr... [more]
AT1G23980.11.237e-1447.83| Symbols: | RING/U-box superfamily protein | chr... [more]
AT4G30400.14.261e-732.03| Symbols: | RING/U-box superfamily protein | chr... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 43..56
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG537593 ID=FG537593; Name=FG537593; organism=Pisum sativum; type=EST; length=555bp
TAGCAGTAAATTGGATGCAAGAAGATGTTACTCAATGGGCTCTTACCAAT
ATGTGGTTGGAAATTCAGAGTTAAGGGTAACTTTGGATGCATTAAACCAT
GAAAGTAAAGTTCATCATGATGATAGAAGGATGAACAAAGGAATTGAAAA
CAGTGAGAATCTTTGTGTGGAAAGTGATTTGGAAGGAAAGAAGATTAGTA
ATGTTAGTAAAGGTGAAAGTTTTTCGATTTCGAAGATTTGGTTGTGGCCA
AGGAAAGGGAAATTTCCTTCAAGTTCTTTAGAAGCTCATAATGGAATGGC
ATTACCATCTTATCTTAACAAAGATTTGCAGCATCATGGAATGAGGAAAA
CAGATGGTGTATGAAATAATGAAAGGTAACTTATATTAACTTTGTTTCTT
CATTCACTTGAATATTCATTTTAATCCATTGATTGAAGTTGCTTCACTTT
GCATTAGAGTTCCAAGAGAATTTGGTGTGCTAATTTTGAGATTGTGACAT
GATATTTTGATGTATTATTATAGAGAAAGCACAAGAAATACAATTCCTTT
CTTTC
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