FG538628

EST Overview
NameFG538628
Unique NameFG538628
TypeEST
OrganismPisum sativum (pea)
Sequence length654
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of FG538628 vs. TrEMBL
Match: C6TH95_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 7.008e-49
Identity = 107/173 (61.85%), Postives = 119/173 (68.79%), Query Frame = 3
Query:    3 TNNPILDSNRXXXXXXXXXXXXXXXADKAEVKLHSFDPVCRINELTNKSVGTERMMSLRSISSARKVNTAGLQ*HIPVQNPEVVLFVEIYHNVRKGVKIXXXXXXXXXXXXXXRDKICCSTDQIMQKAGQHDPSGHFLIEDVFYTDLRDPSAIDLTRPILDWLRYSKEEAQEK 521
            TN+ +L+S+                 DKA VKLHSFD   RINE  +KS  TERM +LRS SS RKVNTA LQ H+PV  PEVVL VE+YHNVRKG KI              RDKI CSTDQ+M KAGQHDPSG+F+IEDVF  DLRDPSAIDLTRPILDWLR SKEEAQ+K
Sbjct:  117 TNDSVLESDCIEKVEQVVRIKQKQEEDKASVKLHSFDR--RINEAVHKSTRTERMRTLRSTSSTRKVNTASLQEHLPVLYPEVVLSVEVYHNVRKGTKIQELLVLGGQTLTALRDKIFCSTDQVMHKAGQHDPSGYFIIEDVFCPDLRDPSAIDLTRPILDWLRDSKEEAQKK 287          
BLAST of FG538628 vs. TrEMBL
Match: B9ID72_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_253872 PE=4 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.493e-46
Identity = 103/192 (53.65%), Postives = 124/192 (64.58%), Query Frame = 3
Query:   81 DKAEVKLHSFDPVCRINELTNKSVG-TERMMSLRSISSARKVNTAGLQ*HIPVQNPEVVLFVEIYHNVRKGVKIXXXXXXXXXXXXXXRDKICCSTDQIMQKAGQHDPSGHFLIEDVFYTDLRDPSAIDLTRPILDWLRYSKEEAQEKWECIINEKLQLKQKAVIGEASVSHLPRFASLQMHMTRFCDLSFR 653
            DKA  +LHSF+  C+IN     S+  T  M SLRS +  +K  ++ LQ HI V  PEVV+ VEIYH +RK  K               RDKI C TDQ+MQKAGQHDPSG+FL+EDVF  DLRD SAID + PI+DWLR  K +A  KWECII+  LQ KQKAV+GE++   LP+F    M  TRFCDL FR
Sbjct:   21 DKAMTRLHSFN--CKINYSGITSLNRTNTMQSLRSTNFGKKPKSSDLQEHIAVMLPEVVICVEIYHCIRKWFKTQEFLVLGGQTLTEMRDKIYCLTDQMMQKAGQHDPSGYFLVEDVFCNDLRDTSAIDYSEPIIDWLRNKKADAFRKWECIISGDLQQKQKAVLGESTTPCLPQFRRRDMQNTRFCDLRFR 210          
BLAST of FG538628 vs. TrEMBL
Match: D7TRZ9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_921.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00002826001 PE=4 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.198e-40
Identity = 79/136 (58.09%), Postives = 99/136 (72.79%), Query Frame = 3
Query:  246 EVVLFVEIYHNVRKGVKIXXXXXXXXXXXXXXRDKICCSTDQIMQKAGQHDPSGHFLIEDVFYTDLRDPSAIDLTRPILDWLRYSKEEAQEKWECIINEKLQLKQKAVIGEASVSHLPRFASLQMHMTRFCDLSFR 653
            + VL +EIYH+ R  VK               RD ICC+TDQ+MQKAG+H+PSG+ LIEDVF  DLRDPSAID ++PI DWLR SK++A EKWECII+  LQ KQKA++G+ ++SHLP F ++ MH TRFCDL FR
Sbjct:    6 DAVLCIEIYHSRRTWVKAQEFLVLGRQTLTELRDNICCATDQVMQKAGKHNPSGYILIEDVFCNDLRDPSAIDYSKPIFDWLRNSKDDALEKWECIISGDLQQKQKALLGDPTISHLPHFKAVDMHKTRFCDLQFR 141          
BLAST of FG538628 vs. TrEMBL
Match: D7T5Z1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_1255.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00004332001 PE=4 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.947e-40
Identity = 78/136 (57.35%), Postives = 99/136 (72.79%), Query Frame = 3
Query:  246 EVVLFVEIYHNVRKGVKIXXXXXXXXXXXXXXRDKICCSTDQIMQKAGQHDPSGHFLIEDVFYTDLRDPSAIDLTRPILDWLRYSKEEAQEKWECIINEKLQLKQKAVIGEASVSHLPRFASLQMHMTRFCDLSFR 653
            + VL +EIYH+ R  VK               RD ICC+TDQ+MQKAG+H+PSG+ LIEDVF  DLRDPSAID ++PI DWLR SK++A EKWECII+ +LQ KQKA++G+ ++S LP F ++ MH TRFCDL FR
Sbjct:    6 DAVLCIEIYHSRRTWVKAQEFLVLGRQTLTELRDNICCATDQVMQKAGKHNPSGYILIEDVFCNDLRDPSAIDYSKPIFDWLRNSKDDALEKWECIISGELQQKQKALLGDPTISRLPHFKAVDMHKTRFCDLQFR 141          
BLAST of FG538628 vs. TrEMBL
Match: D7KCY1_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_680619 PE=4 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.240e-37
Identity = 90/193 (46.63%), Postives = 120/193 (62.18%), Query Frame = 3
Query:   81 DKAEVKLHSFDPVCRIN-ELTNKSVGTERMMSLRSI-SSARKVNTAGLQ*HIPVQNPEVVLFVEIYHNVRKGVKIXXXXXXXXXXXXXXRDKICCSTDQIMQKAGQHDPSGHFLIEDVFYTDLRDPSAIDLTRPILDWLRYSKEEAQEKWECIINEKLQLKQKAVIGEASVSHLPRFASLQMHMTRFCDLSFR 653
            DKA V LH F   C    ++     G E+M SLR I ++  +V  + +Q  +    PEV+L +EIY N RK VK               +D I C+TDQ+M+KAG++DPSG+FLIEDVF+ DLR+PSA D + PILDWL  SK+EA +KWEC++  +L  KQK V+GEA    LPR+ +  M  TRFCD+ FR
Sbjct:   84 DKAAVTLHCFSKTCETGKDVAAPPEGFEQMQSLRFIDNNYTQVKPSDIQGQVDPLFPEVILCLEIY-NSRK-VKTQEFLVLGRQMLTELKDNIHCATDQVMKKAGKYDPSGYFLIEDVFHNDLRNPSAKDYSYPILDWLWNSKDEALKKWECVLTGELHKKQKLVLGEAKSVDLPRYRTADMQSTRFCDIRFR 274          
BLAST of FG538628 vs. TrEMBL
Match: Q8L627_ARATH (Putative uncharacterized protein At1g28560 OS=Arabidopsis thaliana GN=At1g28560 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.115e-37
Identity = 91/193 (47.15%), Postives = 119/193 (61.66%), Query Frame = 3
Query:   81 DKAEVKLHSFDPVCRIN-ELTNKSVGTERMMSLRSI-SSARKVNTAGLQ*HIPVQNPEVVLFVEIYHNVRKGVKIXXXXXXXXXXXXXXRDKICCSTDQIMQKAGQHDPSGHFLIEDVFYTDLRDPSAIDLTRPILDWLRYSKEEAQEKWECIINEKLQLKQKAVIGEASVSHLPRFASLQMHMTRFCDLSFR 653
            DKA V LH F        ++     G E+M SLR I ++  K+  + +Q  +    PEV+L VEIY N RK VK               +D I C+TDQ+MQKAG++DPSG+FLIEDVF+ DLR+PSA D + PILDWL  SK+EA +KWEC++  +LQ KQK V+GEA    LPR+ +  M  T FCD+ FR
Sbjct:   84 DKAAVTLHCFSKTSETGKDVVAPPEGFEQMQSLRFIDNNYTKLKPSDIQGQVDPLFPEVILCVEIY-NSRK-VKTQEFLVLGRQMLTELKDNIHCATDQVMQKAGKYDPSGYFLIEDVFHNDLRNPSAKDYSYPILDWLWNSKDEALKKWECVLTGELQKKQKLVLGEAKSVDLPRYRTADMQSTHFCDIRFR 274          
BLAST of FG538628 vs. TrEMBL
Match: Q9S7F0_ARATH (F1K23.20 OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.209e-36
Identity = 92/213 (43.19%), Postives = 120/213 (56.34%), Query Frame = 3
Query:   81 DKAEVKLHSFDPVCRIN-ELTNKSVGTERMMSLRSIS---------------------SARKVNTAGLQ*HIPVQNPEVVLFVEIYHNVRKGVKIXXXXXXXXXXXXXXRDKICCSTDQIMQKAGQHDPSGHFLIEDVFYTDLRDPSAIDLTRPILDWLRYSKEEAQEKWECIINEKLQLKQKAVIGEASVSHLPRFASLQMHMTRFCDLSFR 653
            DKA V LH F        ++     G E+M SLR I                      S++K+  + +Q  +    PEV+L VEIY N RK VK               +D I C+TDQ+MQKAG++DPSG+FLIEDVF+ DLR+PSA D + PILDWL  SK+EA +KWEC++  +LQ KQK V+GEA    LPR+ +  M  T FCD+ FR
Sbjct:  171 DKAAVTLHCFSKTSETGKDVVAPPEGFEQMQSLRFIDNNYTASDFPLQCLFSVDYASPSSKKLKPSDIQGQVDPLFPEVILCVEIY-NSRK-VKTQEFLVLGRQMLTELKDNIHCATDQVMQKAGKYDPSGYFLIEDVFHNDLRNPSAKDYSYPILDWLWNSKDEALKKWECVLTGELQKKQKLVLGEAKSVDLPRYRTADMQSTHFCDIRFR 381          
BLAST of FG538628 vs. TrEMBL
Match: B9SGW6_RICCO (snRNA-activating protein complex subunit, putative OS=Ricinus communis GN=RCOM_0820550 PE=4 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.017e-31
Identity = 66/104 (63.46%), Postives = 78/104 (75.00%), Query Frame = 3
Query:  342 RDKICCSTDQIMQKAGQHDPSGHFLIEDVFYTDLRDPSAIDLTRPILDWLRYSKEEAQEKWECIINEKLQLKQKAVIGEASVSHLPRFASLQMHMTRFCDLSFR 653
            RDKI C TDQ+M+KAGQHDPSG+FL+EDVF  DLRD SAID + PI DWL  SK++A  KWECI   +L+ KQKAV+GE   S LP+F  + M  TRFCDL FR
Sbjct:    6 RDKIYCMTDQVMEKAGQHDPSGYFLVEDVFCNDLRDSSAIDYSEPIFDWLSNSKDDALRKWECITGGELRRKQKAVLGELPSSCLPQFRRVDMQKTRFCDLRFR 109          
BLAST of FG538628 vs. TrEMBL
Match: C5XG53_SORBI (Putative uncharacterized protein Sb03g043530 OS=Sorghum bicolor GN=Sb03g043530 PE=4 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.958e-31
Identity = 79/192 (41.15%), Postives = 103/192 (53.65%), Query Frame = 3
Query:   81 DKAEVKLHSFDP-VCRINELTNKSVGTERMMSLRSISSARKVNTAGLQ*HIPVQNPEVVLFVEIYHNVRKGVKIXXXXXXXXXXXXXXRDKICCSTDQIMQKAGQHDPSGHFLIEDVFYTDLRDPSAIDLTRPILDWLRYSKEEAQEKWECIINEKLQLKQKAVIGEASVSHLPRFASLQMHMTRFCDLSFR 653
            DK   +LHSF     +     + S   E   SL+ I +  K        H PV +PEV+L VE+Y      VK               RD ICC TD++M+ AGQHD SG+FLIED FY D R  SA D ++PILDWL  S +E  EKW+ I +  L+ +QK ++   S+S++P   S  M MTRF DL FR
Sbjct:  277 DKFAARLHSFSGNSVKPKGSKSSSEKIETARSLKLIGAPWKNKALRSDEHRPVVHPEVILCVEVYQKTYASVKSQELLVLGSQFLTDLRDNICCLTDKLMKVAGQHDHSGYFLIEDTFYNDTRHYSATDYSKPILDWLENSSDEVAEKWDAITSGVLKKRQKDLLSGLSISNVPELKSETMQMTRFSDLHFR 468          
BLAST of FG538628 vs. TrEMBL
Match: B6SW06_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.056e-29
Identity = 80/200 (40.00%), Postives = 102/200 (51.00%), Query Frame = 3
Query:   81 DKAEVKLHSFDPVCRINELTNKSVGTERMMSLRSISSARKVNTAGL---------Q*HIPVQNPEVVLFVEIYHNVRKGVKIXXXXXXXXXXXXXXRDKICCSTDQIMQKAGQHDPSGHFLIEDVFYTDLRDPSAIDLTRPILDWLRYSKEEAQEKWECIINEKLQLKQKAVIGEASVSHLPRFASLQMHMTRFCDLSFR 653
            DK   +LHSF      N +  K   +    S   I  AR +N  G            H PV  PEV+L VEIY      VK               RD I C TD++M+ AGQHD SG+FLIED FY D R  SA D ++PILDWL  S +E  EKW+ I +  L+ +QK ++   S+S++P F S +M  TR  DL FR
Sbjct:  275 DKFAARLHSFSG----NSVKPKGSKS----SCEKIEMARSLNLIGAPWKNKALRSDEHRPVVRPEVILCVEIYQKTYASVKSQELLLLGSQFLTDLRDNIYCLTDKVMKVAGQHDHSGYFLIEDTFYNDTRHRSATDYSKPILDWLENSSDEVTEKWDAITSGVLKKRQKDLLRGLSISNVPEFKSEKMQTTRISDLHFR 466          
BLAST of FG538628 vs. TAIR peptide
Match: AT1G28560.2 (| Symbols: SRD2 | snRNA activating complex family protein | chr1:10038197-10040382 REVERSE LENGTH=386)

HSP 1 Score: 159.458 bits (402), Expect = 1.484e-39
Identity = 91/193 (47.15%), Postives = 119/193 (61.66%), Query Frame = 3
Query:   81 DKAEVKLHSFDPVCRIN-ELTNKSVGTERMMSLRSI-SSARKVNTAGLQ*HIPVQNPEVVLFVEIYHNVRKGVKIXXXXXXXXXXXXXXRDKICCSTDQIMQKAGQHDPSGHFLIEDVFYTDLRDPSAIDLTRPILDWLRYSKEEAQEKWECIINEKLQLKQKAVIGEASVSHLPRFASLQMHMTRFCDLSFR 653
            DKA V LH F        ++     G E+M SLR I ++  K+  + +Q  +    PEV+L VEIY N RK VK               +D I C+TDQ+MQKAG++DPSG+FLIEDVF+ DLR+PSA D + PILDWL  SK+EA +KWEC++  +LQ KQK V+GEA    LPR+ +  M  T FCD+ FR
Sbjct:   95 DKAAVTLHCFSKTSETGKDVVAPPEGFEQMQSLRFIDNNYTKLKPSDIQGQVDPLFPEVILCVEIY-NSRK-VKTQEFLVLGRQMLTELKDNIHCATDQVMQKAGKYDPSGYFLIEDVFHNDLRNPSAKDYSYPILDWLWNSKDEALKKWECVLTGELQKKQKLVLGEAKSVDLPRYRTADMQSTHFCDIRFR 285          
BLAST of FG538628 vs. TAIR peptide
Match: AT1G28560.1 (| Symbols: SRD2 | snRNA activating complex family protein | chr1:10038197-10040382 REVERSE LENGTH=375)

HSP 1 Score: 159.458 bits (402), Expect = 1.484e-39
Identity = 91/193 (47.15%), Postives = 119/193 (61.66%), Query Frame = 3
Query:   81 DKAEVKLHSFDPVCRIN-ELTNKSVGTERMMSLRSI-SSARKVNTAGLQ*HIPVQNPEVVLFVEIYHNVRKGVKIXXXXXXXXXXXXXXRDKICCSTDQIMQKAGQHDPSGHFLIEDVFYTDLRDPSAIDLTRPILDWLRYSKEEAQEKWECIINEKLQLKQKAVIGEASVSHLPRFASLQMHMTRFCDLSFR 653
            DKA V LH F        ++     G E+M SLR I ++  K+  + +Q  +    PEV+L VEIY N RK VK               +D I C+TDQ+MQKAG++DPSG+FLIEDVF+ DLR+PSA D + PILDWL  SK+EA +KWEC++  +LQ KQK V+GEA    LPR+ +  M  T FCD+ FR
Sbjct:   84 DKAAVTLHCFSKTSETGKDVVAPPEGFEQMQSLRFIDNNYTKLKPSDIQGQVDPLFPEVILCVEIY-NSRK-VKTQEFLVLGRQMLTELKDNIHCATDQVMQKAGKYDPSGYFLIEDVFHNDLRNPSAKDYSYPILDWLWNSKDEALKKWECVLTGELQKKQKLVLGEAKSVDLPRYRTADMQSTHFCDIRFR 274          
The following BLAST results are available for this feature:
BLAST of FG538628 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TH95_SOYBN7.008e-4961.85Putative uncharacterized protein OS=Glycine max PE... [more]
B9ID72_POPTR2.493e-4653.65Predicted protein (Fragment) OS=Populus trichocarp... [more]
D7TRZ9_VITVI1.198e-4058.09Whole genome shotgun sequence of line PN40024, sca... [more]
D7T5Z1_VITVI5.947e-4057.35Whole genome shotgun sequence of line PN40024, sca... [more]
D7KCY1_ARALY1.240e-3746.63Predicted protein OS=Arabidopsis lyrata subsp. lyr... [more]
Q8L627_ARATH2.115e-3747.15Putative uncharacterized protein At1g28560 OS=Arab... [more]
Q9S7F0_ARATH5.209e-3643.19F1K23.20 OS=Arabidopsis thaliana PE=4 SV=1[more]
B9SGW6_RICCO1.017e-3163.46snRNA-activating protein complex subunit, putative... [more]
C5XG53_SORBI2.958e-3141.15Putative uncharacterized protein Sb03g043530 OS=So... [more]
B6SW06_MAIZE8.056e-2940.00Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
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BLAST of FG538628 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G28560.21.484e-3947.15| Symbols: SRD2 | snRNA activating complex family ... [more]
AT1G28560.11.484e-3947.15| Symbols: SRD2 | snRNA activating complex family ... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 11..25
score
NoneNo IPR availablePANTHERPTHR13421FAMILY NOT NAMEDcoord: 7..143
score: 4
NoneNo IPR availablePANTHERPTHR13421:SF7SUBFAMILY NOT NAMEDcoord: 7..143
score: 4
NoneNo IPR availableSEGsegsegcoord: 26..39
score
NoneNo IPR availableSEGsegsegcoord: 17..37
score
IPR022042snRNA-activating protein complex, subunit 3, C-terminalPFAMPF12251zf-SNAP50_Ccoord: 25..122
score: 2.3

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG538628 ID=FG538628; Name=FG538628; organism=Pisum sativum; type=EST; length=654bp
GAACAAATAACCCTATTCTTGATAGTAATCGTATAGAAAAGGTGGAGGAG
GTTGTAAAAATCAAACAGAAGCAGGAAGCAGACAAGGCAGAAGTCAAACT
TCATTCATTTGATCCTGTTTGCAGGATCAATGAACTTACCAACAAATCAG
TAGGAACTGAAAGGATGATGTCTCTTAGGTCCATAAGTTCTGCTAGAAAG
GTGAACACAGCGGGCCTTCAGTAACACATTCCTGTGCAGAATCCAGAAGT
TGTTCTCTTTGTAGAGATTTACCATAATGTTCGAAAAGGTGTTAAGATCC
AAGAGTTGTTAGTTCTTGGTGGACAGACTTTAACAGTACTGAGGGACAAG
ATCTGTTGCTCAACGGACCAGATTATGCAAAAAGCTGGACAACATGATCC
TTCTGGCCATTTTCTCATTGAGGATGTATTTTACACTGATTTGAGGGATC
CATCTGCTATTGATTTGACCAGACCCATACTGGATTGGCTCCGATATTCC
AAGGAGGAGGCACAGGAGAAATGGGAATGTATTATAAATGAGAAACTGCA
GCTAAAACAAAAGGCAGTCATCGGGGAAGCATCTGTATCACACTTGCCTC
GTTTTGCATCTCTTCAGATGCACATGACACGTTTTTGTGACTTAAGCTTT
CGAC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR022042snRNA-activating_su3