AM161767

EST Overview


Name	AM161767
Unique Name	AM161767
Type	EST
Organism	Pisum sativum (pea)
Sequence length	321

Libraries


Library Name	Type
LIBEST_019360 Pisum sativum leaf vegetative	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v2	Pisum sativum unigene v2	EST
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
Pisum sativum unigene v2	2011-03-01
Homology Analysis: Pisum sativum unigene v2 vs TAIR 10 peptide	2011-04-21
Homology Analysis: Pisum sativum unigene v2 vs Trembl	2011-04-27
Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides	2011-04-21
Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins	2011-04-21
InterProScan analysis for Pisum sativum unigene v2	2011-04-27
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of AM161767 vs. TrEMBL
Match: B9HZP8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_568438 PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.643e-11
Identity = 32/44 (72.73%), Postives = 40/44 (90.91%), Query Frame = -3

Query:  104 MANSRIARFFMEXAPPQYVSVMRHRTSKMMETISEEDREISLND 235
            MANSRIA+F  E APPQY+SVMRHRTSKM++TISEEDR+++ +D
Sbjct:    1 MANSRIAKFITEAAPPQYISVMRHRTSKMLDTISEEDRDVAASD 44

[Close]

BLAST of AM161767 vs. TrEMBL
Match: B9SIZ3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0596970 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 3.425e-9
Identity = 28/41 (68.29%), Postives = 37/41 (90.24%), Query Frame = -3

Query:  113 MANSRIARFFMEXAPPQYVSVMRHRTSKMMETISEEDREIS 235
            MA+SRIA+F  E APPQY+SVMRHR SKM++TI+EE+R++S
Sbjct:    1 MASSRIAKFITEVAPPQYISVMRHRASKMLDTINEEERDVS 41

[Close]

BLAST of AM161767 vs. TrEMBL
Match: B9H412_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_648414 PE=4 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 7.631e-9
Identity = 27/44 (61.36%), Postives = 38/44 (86.36%), Query Frame = -3

Query:  104 MANSRIARFFMEXAPPQYVSVMRHRTSKMMETISEEDREISLND 235
            MANSRIA+F  E APPQY++V+R R SK+++TISEEDR+++ +D
Sbjct:    1 MANSRIAKFITEAAPPQYINVIRQRASKLLDTISEEDRDVAASD 44

[Close]

BLAST of AM161767 vs. TrEMBL
Match: B9S0W8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0630180 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 9.966e-9
Identity = 28/41 (68.29%), Postives = 36/41 (87.80%), Query Frame = -3

Query:  113 MANSRIARFFMEXAPPQYVSVMRHRTSKMMETISEEDREIS 235
            MANSRIARF  E APPQY+SV+R R SKM++TI+EE+R++S
Sbjct:    1 MANSRIARFITEVAPPQYISVIRRRASKMLDTINEEERDVS 41

[Close]

BLAST of AM161767 vs. TrEMBL
Match: Q9C754_ARATH (At1g30260/F12P21_9 OS=Arabidopsis thaliana GN=At1g30260 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.187e-7
Identity = 25/40 (62.50%), Postives = 34/40 (85.00%), Query Frame = -3

Query:  116 MANSRIARFFMEXAPPQYVSVMRHRTSKMMETISEEDREI 235
            MA SR+ARF  E APPQ+V+VMR RT+K+++TI EE+RE+
Sbjct:    1 MATSRLARFITEVAPPQFVTVMRRRTAKVLDTIKEEEREV 40

[Close]

BLAST of AM161767 vs. TrEMBL
Match: D7KES6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_890567 PE=4 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 7.142e-7
Identity = 24/40 (60.00%), Postives = 35/40 (87.50%), Query Frame = -3

Query:  116 MANSRIARFFMEXAPPQYVSVMRHRTSKMMETISEEDREI 235
            MA++R+ARF  E APPQ+V+VMR RT+K+++TI EE+RE+
Sbjct:    1 MASARLARFITEVAPPQFVTVMRRRTAKVLDTIKEEEREV 40

[Close]

BLAST of AM161767 vs. TAIR peptide
Match: AT1G30260.1 (| Symbols: | BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G21060.1); Has 30 Blast hits to 30 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:10651159-10651452 FORWARD LENGTH=97)

HSP 1 Score: 57.7658 bits (138), Expect = 1.604e-9
Identity = 25/40 (62.50%), Postives = 34/40 (85.00%), Query Frame = -3

Query:  116 MANSRIARFFMEXAPPQYVSVMRHRTSKMMETISEEDREI 235
            MA SR+ARF  E APPQ+V+VMR RT+K+++TI EE+RE+
Sbjct:    1 MATSRLARFITEVAPPQFVTVMRRRTAKVLDTIKEEEREV 40

[Close]

Query:  116 MANSRIARFFMEXAPPQYVSVMRHRTSKMMETISEEDREI 235
            MA SR+ARF  E APPQ+V+VMR RT+K+++TI EE+RE+
Sbjct:    1 MATSRLARFITEVAPPQFVTVMRRRTAKVLDTIKEEEREV 40

[Close]

BLAST of AM161767 vs. TrEMBL
Match: B9HZP8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_568438 PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.054e-11
Identity = 32/44 (72.73%), Postives = 40/44 (90.91%), Query Frame = -3

Query:  104 MANSRIARFFMEXAPPQYVSVMRHRTSKMMETISEEDREISLND 235
            MANSRIA+F  E APPQY+SVMRHRTSKM++TISEEDR+++ +D
Sbjct:    1 MANSRIAKFITEAAPPQYISVMRHRTSKMLDTISEEDRDVAASD 44

[Close]

BLAST of AM161767 vs. TrEMBL
Match: B9SIZ3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0596970 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 4.284e-9
Identity = 28/41 (68.29%), Postives = 37/41 (90.24%), Query Frame = -3

Query:  113 MANSRIARFFMEXAPPQYVSVMRHRTSKMMETISEEDREIS 235
            MA+SRIA+F  E APPQY+SVMRHR SKM++TI+EE+R++S
Sbjct:    1 MASSRIAKFITEVAPPQYISVMRHRASKMLDTINEEERDVS 41

[Close]

BLAST of AM161767 vs. TrEMBL
Match: B9H412_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_648414 PE=4 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 9.543e-9
Identity = 27/44 (61.36%), Postives = 38/44 (86.36%), Query Frame = -3

Query:  104 MANSRIARFFMEXAPPQYVSVMRHRTSKMMETISEEDREISLND 235
            MANSRIA+F  E APPQY++V+R R SK+++TISEEDR+++ +D
Sbjct:    1 MANSRIAKFITEAAPPQYINVIRQRASKLLDTISEEDRDVAASD 44

[Close]

BLAST of AM161767 vs. TrEMBL
Match: B9S0W8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0630180 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.246e-8
Identity = 28/41 (68.29%), Postives = 36/41 (87.80%), Query Frame = -3

Query:  113 MANSRIARFFMEXAPPQYVSVMRHRTSKMMETISEEDREIS 235
            MANSRIARF  E APPQY+SV+R R SKM++TI+EE+R++S
Sbjct:    1 MANSRIARFITEVAPPQYISVIRRRASKMLDTINEEERDVS 41

[Close]

BLAST of AM161767 vs. TrEMBL
Match: Q9C754_ARATH (At1g30260/F12P21_9 OS=Arabidopsis thaliana GN=At1g30260 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 5.236e-7
Identity = 25/40 (62.50%), Postives = 34/40 (85.00%), Query Frame = -3

Query:  116 MANSRIARFFMEXAPPQYVSVMRHRTSKMMETISEEDREI 235
            MA SR+ARF  E APPQ+V+VMR RT+K+++TI EE+RE+
Sbjct:    1 MATSRLARFITEVAPPQFVTVMRRRTAKVLDTIKEEEREV 40

[Close]

BLAST of AM161767 vs. TrEMBL
Match: D7KES6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_890567 PE=4 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 8.932e-7
Identity = 24/40 (60.00%), Postives = 35/40 (87.50%), Query Frame = -3

Query:  116 MANSRIARFFMEXAPPQYVSVMRHRTSKMMETISEEDREI 235
            MA++R+ARF  E APPQ+V+VMR RT+K+++TI EE+RE+
Sbjct:    1 MASARLARFITEVAPPQFVTVMRRRTAKVLDTIKEEEREV 40

[Close]

BLAST of AM161767 vs. Soybean peptides
Match: Glyma05g27450.1|PACid:16259820 ()

HSP 1 Score: 76.2554 bits (186), Expect = 6.827e-15
Identity = 35/44 (79.55%), Postives = 42/44 (95.45%), Query Frame = -3

Query:  104 MANSRIARFFMEXAPPQYVSVMRHRTSKMMETISEEDREISLND 235
            MANSRIARFFME APPQYV+VMRHRTSKM++TI+E++REIS +D
Sbjct:    1 MANSRIARFFMEVAPPQYVTVMRHRTSKMLDTITEDEREISTSD 44

[Close]

BLAST of AM161767 vs. Medicago proteins
Match: IMGA|Medtr4g083110.1 (Unknown Protein (AHRD V1) chr04_pseudomolecule_IMGAG_V3.5 28294787-28293757 E EGN_Mt100125 20100825)

HSP 1 Score: 81.6481 bits (200), Expect = 1.023e-16
Identity = 39/44 (88.64%), Postives = 42/44 (95.45%), Query Frame = -3

Query:  104 MANSRIARFFMEXAPPQYVSVMRHRTSKMMETISEEDREISLND 235
            MANSRIARFFME APPQYVSVMRHRTSKMMETI+E+DREI+ ND
Sbjct:    1 MANSRIARFFMEVAPPQYVSVMRHRTSKMMETITEDDREINSND 44

[Close]

BLAST of AM161767 vs. Medicago proteins
Match: IMGA|Medtr5g077680.1 (Unknown Protein (AHRD V1) chr05_pseudomolecule_IMGAG_V3.5 32149821-32150467 E EGN_Mt100125 20100825)

HSP 1 Score: 78.5666 bits (192), Expect = 8.662e-16
Identity = 37/44 (84.09%), Postives = 42/44 (95.45%), Query Frame = -3

Query:  104 MANSRIARFFMEXAPPQYVSVMRHRTSKMMETISEEDREISLND 235
            MA+SR+ARFFME APPQYVSVMRHRTSKMMETI+EEDREI+ +D
Sbjct:    1 MASSRVARFFMEVAPPQYVSVMRHRTSKMMETIAEEDREINSHD 44

[Close]

BLAST of AM161767 vs. Medicago proteins
Match: IMGA|Medtr4g083130.1 (Unknown Protein (AHRD V1) chr04_pseudomolecule_IMGAG_V3.5 28301556-28300967 E EGN_Mt100125 20100825)

HSP 1 Score: 75.0998 bits (183), Expect = 9.577e-15
Identity = 37/44 (84.09%), Postives = 39/44 (88.64%), Query Frame = -3

Query:  104 MANSRIARFFMEXAPPQYVSVMRHRTSKMMETISEEDREISLND 235
            MANSRIARFFME APPQYVSVMR RTS MMETI+EED E+S ND
Sbjct:    1 MANSRIARFFMEVAPPQYVSVMRRRTSMMMETITEEDMEMSSND 44

[Close]

BLAST of AM161767 vs. Medicago proteins
Match: IMGA|Medtr5g077640.1 (Unknown Protein (AHRD V1) chr05_pseudomolecule_IMGAG_V3.5 32139817-32140570 E EGN_Mt100125 20100825)

HSP 1 Score: 73.1738 bits (178), Expect = 3.639e-14
Identity = 36/44 (81.82%), Postives = 39/44 (88.64%), Query Frame = -3

Query:  104 MANSRIARFFMEXAPPQYVSVMRHRTSKMMETISEEDREISLND 235
            MA+SRIARFFME APPQYVSVMR R S MMETI+EEDREIS +D
Sbjct:    1 MASSRIARFFMEVAPPQYVSVMRQRASNMMETITEEDREISSHD 44

[Close]

BLAST of AM161767 vs. Medicago proteins
Match: IMGA|Medtr5g077650.1 (AML1 (Fragment) (AHRD V1 *--- Q6J740_BETVU); contains Interpro domain(s) IPR007201 RNA recognition motif 2 chr05_pseudomolecule_IMGAG_V3.5 32144862-32143609 H EGN_Mt100125 20100825)

HSP 1 Score: 49.6766 bits (117), Expect = 4.309e-7
Identity = 33/61 (54.10%), Postives = 34/61 (55.74%), Query Frame = 3

Query:   69 IGDELLGGEITLSFKXXXXXXXXXXXXXFDVLCLITLTYWGGAXSMKNLAMREFA-ILNVN 248
            I DELLG EI L                FDVLCLIT TY GGA  MKNL +REF   LNVN
Sbjct:  132 IADELLGFEIRLVVSII-----------FDVLCLITETYCGGATFMKNLIIREFVFFLNVN 181

The following BLAST results are available for this feature:

BLAST of AM161767 vs. TrEMBL
BLAST of AM161767 vs. TAIR peptide
BLAST of AM161767 vs. TAIR peptide
BLAST of AM161767 vs. TrEMBL
BLAST of AM161767 vs. Soybean peptides
BLAST of AM161767 vs. Medicago proteins

BLAST of AM161767 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 6


Match Name	E-value	Identity	Description
B9HZP8_POPTR	1.643e-11	72.73	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9SIZ3_RICCO	3.425e-9	68.29	Putative uncharacterized protein OS=Ricinus commun...	[more]
B9H412_POPTR	7.631e-9	61.36	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9S0W8_RICCO	9.966e-9	68.29	Putative uncharacterized protein OS=Ricinus commun...	[more]
Q9C754_ARATH	4.187e-7	62.50	At1g30260/F12P21_9 OS=Arabidopsis thaliana GN=At1g...	[more]
D7KES6_ARALY	7.142e-7	60.00	Putative uncharacterized protein OS=Arabidopsis ly...	[more]

BLAST of AM161767 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
AT1G30260.1	1.604e-9	62.50	\| Symbols: \| BEST Arabidopsis thaliana protein ma...	[more]

BLAST of AM161767 vs. TAIR peptide
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
AT1G30260.1	1.604e-9	62.50	\| Symbols: \| BEST Arabidopsis thaliana protein ma...	[more]

BLAST of AM161767 vs. TrEMBL
Analysis Date: 2011-04-27 (Homology Analysis: Pisum sativum unigene v2 vs Trembl)
Total hits: 6


Match Name	E-value	Identity	Description
B9HZP8_POPTR	2.054e-11	72.73	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9SIZ3_RICCO	4.284e-9	68.29	Putative uncharacterized protein OS=Ricinus commun...	[more]
B9H412_POPTR	9.543e-9	61.36	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9S0W8_RICCO	1.246e-8	68.29	Putative uncharacterized protein OS=Ricinus commun...	[more]
Q9C754_ARATH	5.236e-7	62.50	At1g30260/F12P21_9 OS=Arabidopsis thaliana GN=At1g...	[more]
D7KES6_ARALY	8.932e-7	60.00	Putative uncharacterized protein OS=Arabidopsis ly...	[more]

BLAST of AM161767 vs. Soybean peptides
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides)
Total hits: 1


Match Name	E-value	Identity	Description
Glyma05g27450.1\|PACid:16259820	6.827e-15	79.55		[more]

BLAST of AM161767 vs. Medicago proteins
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins)
Total hits: 5


Match Name	E-value	Identity	Description
IMGA\|Medtr4g083110.1	1.023e-16	88.64	Unknown Protein (AHRD V1) chr04_pseudomolecule_IMG...	[more]
IMGA\|Medtr5g077680.1	8.662e-16	84.09	Unknown Protein (AHRD V1) chr05_pseudomolecule_IMG...	[more]
IMGA\|Medtr4g083130.1	9.577e-15	84.09	Unknown Protein (AHRD V1) chr04_pseudomolecule_IMG...	[more]
IMGA\|Medtr5g077640.1	3.639e-14	81.82	Unknown Protein (AHRD V1) chr05_pseudomolecule_IMG...	[more]
IMGA\|Medtr5g077650.1	4.309e-7	54.10	AML1 (Fragment) (AHRD V1 *--- Q6J740_BETVU); conta...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v2
Date Performed: 2011-04-27


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 1..22 score: NAcoord: 38..50 score
None	No IPR available	SEG	seg	seg	coord: 49..82 score

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 1..22 score: NAcoord: 38..50 score
None	No IPR available	SEG	seg	seg	coord: 49..82 score

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v2
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>AM161767 ID=AM161767; Name=AM161767; organism=Pisum sativum; type=EST; length=321bp
ACTTACTATTAACACTTGCATTGGTAGAAGAAGAGGCACAAGCAGAAGCA
GCAAGTGATGAAGCTGAAATAGGTGATGAACTTTTAGGTGGTGAAATTAC
ACTATCATTTAAGCTGATTTCCCTATCCTCTTCTGAAATTGTTTCCATCA
TCTTTGATGTTCTATGCCTCATCACACTAACATATTGGGGTGGTGCCNCC
TCCATGAAAAACCTTGCAATGCGAGAATTTGCCATTCTTAATGTGAATTA
ATTTCAAGTGTTTAAAAAGTGTAGCTATTTGCNAAGAGATAGATAGGAAT
GAAAATAGAGTTGAAGTTGTT

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