CD860531
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CD860531 vs. TrEMBL
Match: B9IK65_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_577738 PE=4 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.367e-26 Identity = 57/82 (69.51%), Postives = 71/82 (86.59%), Query Frame = -2 Query: 165 LDDARCQAYSPSEPPKPGEVFSRQSIPFNVGESQFSLPTNPQELIQRYQEFKNALKDDTMDYSLYTANIKRKRQTPTPRKVQ 410 L+DARCQA+SP+EPPKPGE FSRQ+IPF++ ++ SLP+ Q+L+QRYQEFK ALK+DT+DYS YTANIKRKR P PRKV+ Sbjct: 1697 LNDARCQAFSPTEPPKPGEAFSRQNIPFDMSQTGTSLPSTYQDLVQRYQEFKGALKEDTVDYSTYTANIKRKR--PAPRKVK 1776
BLAST of CD860531 vs. TrEMBL
Match: B9SJD1_RICCO (Pearli, putative OS=Ricinus communis GN=RCOM_0525580 PE=4 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 5.831e-25 Identity = 54/83 (65.06%), Postives = 70/83 (84.34%), Query Frame = -2 Query: 165 SLDDARCQAYSPSEPPKPGEVFSRQSIPFNVGESQFSLPTNPQELIQRYQEFKNALKDDTMDYSLYTANIKRKRQTPTPRKVQ 413 SL+DARCQA+SP+EPPK GE SRQ+IPF++ E+ S+P+ Q+L+QRYQEFK+ALK+D +DY+ YTANIKRKR PTPRK + Sbjct: 1637 SLNDARCQAFSPNEPPKSGEALSRQNIPFDISETSTSVPSTYQDLVQRYQEFKSALKEDAVDYTTYTANIKRKR--PTPRKTK 1717
BLAST of CD860531 vs. TrEMBL
Match: B9H0J3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_556404 PE=4 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 4.936e-24 Identity = 52/81 (64.20%), Postives = 66/81 (81.48%), Query Frame = -2 Query: 171 SLDDARCQAYSPSEPPKPGEVFSRQSIPFNVGESQFSLPTNPQELIQRYQEFKNALKDDTMDYSLYTANIKRKRQTPTPRK 413 SL+D+RCQA+SP+EPPKPGE SRQ+IPF++ + +P+ Q+L+QRYQEFK ALK+DT+DYS YTANIKRKR TP K Sbjct: 52 SLNDSRCQAFSPTEPPKPGEPLSRQNIPFDINHACTGVPSKYQDLVQRYQEFKGALKEDTVDYSTYTANIKRKRLTPRKLK 132
BLAST of CD860531 vs. TrEMBL
Match: D7SXK2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_108.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00011514001 PE=4 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 9.309e-23 Identity = 53/81 (65.43%), Postives = 65/81 (80.25%), Query Frame = -2 Query: 171 SLDDARCQAYSPSEPPKPGEVFSRQSIPFNVGESQFSLPTNPQELIQRYQEFKNALKDDTMDYSLYTANIKRKRQTPTPRK 413 SL+DARCQA+SP+EP K GEV ++Q+IPF + E PT QEL+QRYQEFK+ALK+DT+DYS YTANIKRKR P PR+ Sbjct: 1625 SLNDARCQAFSPNEPLKTGEVLTKQNIPFYITEMHIDSPTTHQELMQRYQEFKSALKEDTVDYSAYTANIKRKR--PAPRR 1703
BLAST of CD860531 vs. TrEMBL
Match: D7M7D7_ARALY (Sister chromatid cohesion 2 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_909528 PE=4 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 9.309e-23 Identity = 47/87 (54.02%), Postives = 69/87 (79.31%), Query Frame = -2 Query: 153 SLDDARCQAYSPSEPPKPGEVFSRQSIPFNVGESQFSLPTNPQELIQRYQEFKNALKDDTMDYSLYTANIKRKRQTPTPRKVQVRKP 413 SL+D RCQAYSP+EP KPG+ SRQS+ F++ E++ LP+ Q+L+QRYQEFKNA+++DT+D+++Y++N+KRKR TP +KP Sbjct: 1722 SLNDDRCQAYSPTEPLKPGDPLSRQSVAFDLSETRTDLPSTYQDLVQRYQEFKNAMREDTVDFTIYSSNVKRKRPTPRKTSRSAKKP 1808
BLAST of CD860531 vs. TrEMBL
Match: Q9LF28_ARATH (Putative uncharacterized protein T20K14_150 OS=Arabidopsis thaliana GN=T20K14_150 PE=4 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.708e-22 Identity = 48/81 (59.26%), Postives = 68/81 (83.95%), Query Frame = -2 Query: 171 SLDDARCQAYSPSEPPKPGEVFSRQSIPFNVGESQFSLPTNPQELIQRYQEFKNALKDDTMDYSLYTANIKRKRQTPTPRK 413 SL+D RCQAYSP+EP KPG+ SRQS+ F++ E++ LP+ Q+L+QRYQEFKNA+++DT+D+++Y+ N+KRKR PTPRK Sbjct: 1630 SLNDDRCQAYSPTEPLKPGDPLSRQSVAFDLSETRTDLPSTYQDLVQRYQEFKNAMREDTVDFTIYSTNVKRKR--PTPRK 1708
BLAST of CD860531 vs. TrEMBL
Match: A7UDC4_ARATH (Sister chromatid cohesion protein OS=Arabidopsis thaliana GN=SCC2 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.708e-22 Identity = 48/81 (59.26%), Postives = 68/81 (83.95%), Query Frame = -2 Query: 171 SLDDARCQAYSPSEPPKPGEVFSRQSIPFNVGESQFSLPTNPQELIQRYQEFKNALKDDTMDYSLYTANIKRKRQTPTPRK 413 SL+D RCQAYSP+EP KPG+ SRQS+ F++ E++ LP+ Q+L+QRYQEFKNA+++DT+D+++Y+ N+KRKR PTPRK Sbjct: 421 SLNDDRCQAYSPTEPLKPGDPLSRQSVAFDLSETRTDLPSTYQDLVQRYQEFKNAMREDTVDFTIYSTNVKRKR--PTPRK 499
BLAST of CD860531 vs. TrEMBL
Match: A5HEI1_ARATH (Sister chromatid cohesion 2 OS=Arabidopsis thaliana GN=At5g15540 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.708e-22 Identity = 48/81 (59.26%), Postives = 68/81 (83.95%), Query Frame = -2 Query: 171 SLDDARCQAYSPSEPPKPGEVFSRQSIPFNVGESQFSLPTNPQELIQRYQEFKNALKDDTMDYSLYTANIKRKRQTPTPRK 413 SL+D RCQAYSP+EP KPG+ SRQS+ F++ E++ LP+ Q+L+QRYQEFKNA+++DT+D+++Y+ N+KRKR PTPRK Sbjct: 1721 SLNDDRCQAYSPTEPLKPGDPLSRQSVAFDLSETRTDLPSTYQDLVQRYQEFKNAMREDTVDFTIYSTNVKRKR--PTPRK 1799
BLAST of CD860531 vs. TrEMBL
Match: C5X796_SORBI (Putative uncharacterized protein Sb02g000990 OS=Sorghum bicolor GN=Sb02g000990 PE=4 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.099e-18 Identity = 42/80 (52.50%), Postives = 62/80 (77.50%), Query Frame = -2 Query: 174 SLDDARCQAYSPSEPPKPGEVFSRQSIPFNVGESQFSLPTNPQELIQRYQEFKNALKDDTMDYSLYTANIKRKRQTPTPR 413 SLDDARCQA+S EPPK GE FSRQ++PFN+G + SLP+ Q++ YQ+FK AL++D+MD++++ ++ + R+ PTPR Sbjct: 488 SLDDARCQAFSLKEPPKSGEAFSRQNVPFNIGNTNISLPSCLQDVASVYQDFKTALREDSMDFAVFIPSV-QTRKRPTPR 566
BLAST of CD860531 vs. TrEMBL
Match: Q69WR1_ORYSJ (Os07g0110400 protein OS=Oryza sativa subsp. japonica GN=OJ1123_C12.101 PE=4 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 9.016e-18 Identity = 44/88 (50.00%), Postives = 63/88 (71.59%), Query Frame = -2 Query: 153 SLDDARCQAYSPSEPPKPGEVFSRQSIPFNVGESQFSLPTNPQELIQRYQEFKNALKDDTMDYSLYTANIKRKRQTPTPR-KVQVRKP 413 SL DARCQA+S +PPK GE S+Q+IP N+ + SLP+ PQ+ + YQ+FK L++DT+DY +YT + ++KR PTPR +VR+P Sbjct: 632 SLTDARCQAFSLKDPPKSGETISKQNIPLNISNTNTSLPSCPQDAARVYQDFKTVLREDTVDYGMYTVSAQKKR--PTPRSSSRVRRP 717
BLAST of CD860531 vs. TAIR peptide
Match: AT5G15540.2 (| Symbols: EMB2773 | PHD finger family protein | chr5:5047887-5057411 REVERSE LENGTH=1844) HSP 1 Score: 108.227 bits (269), Expect = 1.553e-24 Identity = 48/81 (59.26%), Postives = 68/81 (83.95%), Query Frame = -2 Query: 171 SLDDARCQAYSPSEPPKPGEVFSRQSIPFNVGESQFSLPTNPQELIQRYQEFKNALKDDTMDYSLYTANIKRKRQTPTPRK 413 SL+D RCQAYSP+EP KPG+ SRQS+ F++ E++ LP+ Q+L+QRYQEFKNA+++DT+D+++Y+ N+KRKR PTPRK Sbjct: 1719 SLNDDRCQAYSPTEPLKPGDPLSRQSVAFDLSETRTDLPSTYQDLVQRYQEFKNAMREDTVDFTIYSTNVKRKR--PTPRK 1797
BLAST of CD860531 vs. TAIR peptide
Match: AT5G15540.1 (| Symbols: EMB2773, ATSCC2, SCC2 | PHD finger family protein | chr5:5047887-5057411 REVERSE LENGTH=1846) HSP 1 Score: 108.227 bits (269), Expect = 1.553e-24 Identity = 48/81 (59.26%), Postives = 68/81 (83.95%), Query Frame = -2 Query: 171 SLDDARCQAYSPSEPPKPGEVFSRQSIPFNVGESQFSLPTNPQELIQRYQEFKNALKDDTMDYSLYTANIKRKRQTPTPRK 413 SL+D RCQAYSP+EP KPG+ SRQS+ F++ E++ LP+ Q+L+QRYQEFKNA+++DT+D+++Y+ N+KRKR PTPRK Sbjct: 1721 SLNDDRCQAYSPTEPLKPGDPLSRQSVAFDLSETRTDLPSTYQDLVQRYQEFKNAMREDTVDFTIYSTNVKRKR--PTPRK 1799 The following BLAST results are available for this feature:
BLAST of CD860531 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of CD860531 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CD860531 ID=CD860531; Name=CD860531; organism=Pisum sativum; type=EST; length=414bpback to top |