EX570852
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EX570852 vs. TrEMBL
Match: D7TCZ9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_57.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00029990001 PE=4 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.503e-45 Identity = 95/121 (78.51%), Postives = 105/121 (86.78%), Query Frame = 1 Query: 4 STSLIEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAVGLFRLLELANAMEPTILEKLCAALNINKRSVDRDLDVYRNLLSKLVQAKELLKEFIDXXXXXXXXXTEPQKANEAITK*FGQ 366 ++SL+EFSS+EGEVEGILKDIAERAGGKG FSYSRFFA+GLFRLLELANA EPTILEKLCAA NI+KRSVDRDLDVYRNLL+KLVQAKELLKE++D E QKANEAITK G+ Sbjct: 115 ASSLVEFSSKEGEVEGILKDIAERAGGKGSFSYSRFFAIGLFRLLELANATEPTILEKLCAAFNISKRSVDRDLDVYRNLLTKLVQAKELLKEYVDREKKKREERVESQKANEAITKCLGE 235
BLAST of EX570852 vs. TrEMBL
Match: C6T9W9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 3.348e-45 Identity = 97/120 (80.83%), Postives = 103/120 (85.83%), Query Frame = 1 Query: 7 TSLIEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAVGLFRLLELANAMEPTILEKLCAALNINKRSVDRDLDVYRNLLSKLVQAKELLKEFIDXXXXXXXXXTEPQKANEAITK*FGQ 366 TSL+EFSS+EGE E ILKDIAERAGGKG+FSYSRFFAVGLFRL+ELANA EPTIL+KLCAALNINKRSVDRDLDVYR LLSKLVQAKELLKE+ID EPQKANEAIT GQ Sbjct: 173 TSLVEFSSKEGEAERILKDIAERAGGKGEFSYSRFFAVGLFRLVELANATEPTILDKLCAALNINKRSVDRDLDVYRILLSKLVQAKELLKEYIDREKKKRDERVEPQKANEAITTCLGQ 292
BLAST of EX570852 vs. TrEMBL
Match: C0P9Q2_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.465e-42 Identity = 87/116 (75.00%), Postives = 101/116 (87.07%), Query Frame = 1 Query: 7 TSLIEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAVGLFRLLELANAMEPTILEKLCAALNINKRSVDRDLDVYRNLLSKLVQAKELLKEFIDXXXXXXXXXTEPQKANEAITK 354 +SL++FSSR+GE+E ILKDI+ERA GKG+FSYSRFFAVGLFRLLELANA EPT+L+KLCAALNINKRSVDRDLDVYRN+LSKLVQAKELLKE++D +E K NEA+TK Sbjct: 159 SSLVDFSSRDGEIESILKDISERAKGKGNFSYSRFFAVGLFRLLELANATEPTVLDKLCAALNINKRSVDRDLDVYRNILSKLVQAKELLKEYVDREKKKREERSETPKPNEAVTK 274
BLAST of EX570852 vs. TrEMBL
Match: B7FJN0_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.910e-42 Identity = 92/116 (79.31%), Postives = 99/116 (85.34%), Query Frame = 1 Query: 4 STSLIEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAVGLFRLLELANAMEPTILEKLCAALNINKRSVDRDLDVYRNLLSKLVQAKELLKEFIDXXXXXXXXXTEPQKANEAIT 351 S SL+EFSSRE EVEG+LKDIA+RAG KG+FSYSRFFAVGLFRLLELANA EPTIL+KLCAALNI+KRSVDRDLDVYR LLSKLVQAKEL +EFID EPQKAN AIT Sbjct: 171 SISLVEFSSREREVEGVLKDIAKRAGEKGEFSYSRFFAVGLFRLLELANATEPTILDKLCAALNIDKRSVDRDLDVYRMLLSKLVQAKELQREFIDREKKKREERVEPQKANGAIT 286
BLAST of EX570852 vs. TrEMBL
Match: Q0D5I3_ORYSJ (Os07g0558500 protein OS=Oryza sativa subsp. japonica GN=Os07g0558500 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 7.719e-42 Identity = 87/115 (75.65%), Postives = 100/115 (86.96%), Query Frame = 1 Query: 10 SLIEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAVGLFRLLELANAMEPTILEKLCAALNINKRSVDRDLDVYRNLLSKLVQAKELLKEFIDXXXXXXXXXTEPQKANEAITK 354 SL+EFSS++GE+E ILKDI+ERA GKG FSYSRFFAVGLFRLLELANA EPTIL+KLCAALNINKRSVDRDLDVYRN+LSKLVQAKELLKE+++ +E K+NEA+TK Sbjct: 163 SLVEFSSKDGEIEAILKDISERAQGKGSFSYSRFFAVGLFRLLELANATEPTILDKLCAALNINKRSVDRDLDVYRNILSKLVQAKELLKEYVEREKKKREERSETPKSNEAVTK 277
BLAST of EX570852 vs. TrEMBL
Match: A2YML2_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26464 PE=4 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 7.719e-42 Identity = 87/115 (75.65%), Postives = 100/115 (86.96%), Query Frame = 1 Query: 10 SLIEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAVGLFRLLELANAMEPTILEKLCAALNINKRSVDRDLDVYRNLLSKLVQAKELLKEFIDXXXXXXXXXTEPQKANEAITK 354 SL+EFSS++GE+E ILKDI+ERA GKG FSYSRFFAVGLFRLLELANA EPTIL+KLCAALNINKRSVDRDLDVYRN+LSKLVQAKELLKE+++ +E K+NEA+TK Sbjct: 163 SLVEFSSKDGEIEAILKDISERAQGKGSFSYSRFFAVGLFRLLELANATEPTILDKLCAALNINKRSVDRDLDVYRNILSKLVQAKELLKEYVEREKKKREERSETPKSNEAVTK 277
BLAST of EX570852 vs. TrEMBL
Match: B6UAI2_MAIZE (Chloroplast-localized Ptr ToxA-binding protein1 OS=Zea mays PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.933e-41 Identity = 85/116 (73.28%), Postives = 101/116 (87.07%), Query Frame = 1 Query: 7 TSLIEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAVGLFRLLELANAMEPTILEKLCAALNINKRSVDRDLDVYRNLLSKLVQAKELLKEFIDXXXXXXXXXTEPQKANEAITK 354 +SL++FSSR+GE+E ILKDI+ERA GKG+FSYSRFFAVGLFRLLEL+NA EPTIL+KLCAALN++KRSVDRDLDVYRN+LSKLVQAKELLKE++D +E K NEA+TK Sbjct: 159 SSLVDFSSRDGEIEAILKDISERAKGKGNFSYSRFFAVGLFRLLELSNATEPTILDKLCAALNVSKRSVDRDLDVYRNILSKLVQAKELLKEYVDREKKKREERSEAPKPNEAVTK 274
BLAST of EX570852 vs. TrEMBL
Match: B4FEK7_MAIZE (Chloroplast-localized Ptr ToxA-binding protein1 OS=Zea mays PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.933e-41 Identity = 85/116 (73.28%), Postives = 101/116 (87.07%), Query Frame = 1 Query: 7 TSLIEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAVGLFRLLELANAMEPTILEKLCAALNINKRSVDRDLDVYRNLLSKLVQAKELLKEFIDXXXXXXXXXTEPQKANEAITK 354 +SL++FSSR+GE+E ILKDI+ERA GKG+FSYSRFFAVGLFRLLEL+NA EPTIL+KLCAALN++KRSVDRDLDVYRN+LSKLVQAKELLKE++D +E K NEA+TK Sbjct: 159 SSLVDFSSRDGEIEAILKDISERAKGKGNFSYSRFFAVGLFRLLELSNATEPTILDKLCAALNVSKRSVDRDLDVYRNILSKLVQAKELLKEYVDREKKKREERSEAPKPNEAVTK 274
BLAST of EX570852 vs. TrEMBL
Match: C5XBJ0_SORBI (Putative uncharacterized protein Sb02g036270 OS=Sorghum bicolor GN=Sb02g036270 PE=4 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.831e-41 Identity = 84/117 (71.79%), Postives = 101/117 (86.32%), Query Frame = 1 Query: 4 STSLIEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAVGLFRLLELANAMEPTILEKLCAALNINKRSVDRDLDVYRNLLSKLVQAKELLKEFIDXXXXXXXXXTEPQKANEAITK 354 ++SL++FSSR+GE+E ILKDI+ERA GKG+FSYSRFFAVGLFRLLELANA EPT+L+KLC ALN++KRSVDRDLDVYRN+LSKLVQAKELLKE++D +E K NEA+TK Sbjct: 158 ASSLVDFSSRDGEIEAILKDISERAKGKGNFSYSRFFAVGLFRLLELANATEPTVLDKLCTALNVSKRSVDRDLDVYRNILSKLVQAKELLKEYVDREKKKREERSETPKPNEAVTK 274
BLAST of EX570852 vs. TrEMBL
Match: B9RW80_RICCO (Protein THYLAKOID FORMATION1, chloroplast, putative OS=Ricinus communis GN=RCOM_1176570 PE=4 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.456e-40 Identity = 87/120 (72.50%), Postives = 99/120 (82.50%), Query Frame = 1 Query: 7 TSLIEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAVGLFRLLELANAMEPTILEKLCAALNINKRSVDRDLDVYRNLLSKLVQAKELLKEFIDXXXXXXXXXTEPQKANEAITK*FGQ 366 +SL++FSS+EGEVEGILKDIAERAG G FSYSRFFA+GLFRLLEL+N+ EPT+LEKLCAALNINKR VDRDLDVYRNLLSKLVQAKELLKE++D QKANEA+ G+ Sbjct: 176 SSLVDFSSKEGEVEGILKDIAERAGN-GSFSYSRFFAIGLFRLLELSNSTEPTVLEKLCAALNINKRGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKQEERASSQKANEAVKSCLGE 294
BLAST of EX570852 vs. SwissProt
Match: THF1_ORYSJ (Protein THYLAKOID FORMATION1, chloroplastic OS=Oryza sativa subsp. japonica GN=THF1 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.377e-43 Identity = 87/115 (75.65%), Postives = 100/115 (86.96%), Query Frame = 1 Query: 10 SLIEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAVGLFRLLELANAMEPTILEKLCAALNINKRSVDRDLDVYRNLLSKLVQAKELLKEFIDXXXXXXXXXTEPQKANEAITK 354 SL+EFSS++GE+E ILKDI+ERA GKG FSYSRFFAVGLFRLLELANA EPTIL+KLCAALNINKRSVDRDLDVYRN+LSKLVQAKELLKE+++ +E K+NEA+TK Sbjct: 163 SLVEFSSKDGEIEAILKDISERAQGKGSFSYSRFFAVGLFRLLELANATEPTILDKLCAALNINKRSVDRDLDVYRNILSKLVQAKELLKEYVEREKKKREERSETPKSNEAVTK 277
BLAST of EX570852 vs. SwissProt
Match: THF1_ARATH (Protein THYLAKOID FORMATION 1, chloroplastic OS=Arabidopsis thaliana GN=THF1 PE=1 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.262e-40 Identity = 82/120 (68.33%), Postives = 99/120 (82.50%), Query Frame = 1 Query: 4 STSLIEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAVGLFRLLELANAMEPTILEKLCAALNINKRSVDRDLDVYRNLLSKLVQAKELLKEFIDXXXXXXXXXTEPQKANEAITK*FG 363 S SL++FSS+EG++E +LKDIA RAG K FSYSRFFAVGLFRLLELA+A +PT+L+KLCA+LNINK+SVDRDLDVYRNLLSKLVQAKELLKE+++ + QKANE I+K G Sbjct: 167 SASLVDFSSKEGDIEAVLKDIAGRAGSKEGFSYSRFFAVGLFRLLELASATDPTVLDKLCASLNINKKSVDRDLDVYRNLLSKLVQAKELLKEYVEREKKKQGERAQSQKANETISKCLG 286
BLAST of EX570852 vs. SwissProt
Match: THF1_SOLTU (Protein THYLAKOID FORMATION1, chloroplastic OS=Solanum tuberosum GN=THF1 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 4.710e-39 Identity = 83/123 (67.48%), Postives = 97/123 (78.86%), Query Frame = 1 Query: 4 STSLIEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAVGLFRLLELANAMEPTILEKLCAALNINKRSVDRDLDVYRNLLSKLVQAKELLKEFIDXXXXXXXXXTEPQKANEAITK*FGQNQ 372 + +L++FSS+EGE+E I KDIA+RAG K F YSR FAVGLFRLLELAN +PTILEKLCAALN+NK+SVDRDLDVYRNLLSKLVQAKELLKE+++ E QKANE +TK G Q Sbjct: 168 ANTLVDFSSKEGEIENIFKDIAQRAGTKDGFCYSRLFAVGLFRLLELANVTDPTILEKLCAALNVNKKSVDRDLDVYRNLLSKLVQAKELLKEYVE-REKKKRGERETQKANETVTKCLGDYQ 289
BLAST of EX570852 vs. SwissProt
Match: THF1_ACAM1 (Protein thf1 OS=Acaryochloris marina (strain MBIC 11017) GN=thf1 PE=3 SV=1) HSP 1 Score: 54.6842 bits (130), Expect = 4.754e-7 Identity = 30/91 (32.97%), Postives = 53/91 (58.24%), Query Frame = 1 Query: 40 EVEGILKDIAERAGGKGDFSYSRFFAVGLFRLLELANAM----EPTILE---KLCAALNINKRSVDRDLDVYRNLLSKLVQAKELLKEFID 291 E++ L++IA+ F YSR FA+GLF LLEL+ E ++ E +C LNI++ + +DL++YR L K+ Q ++ + + ++ Sbjct: 124 ELQWQLRNIAQNP----KFKYSRLFAIGLFTLLELSEGNITQDEESLAEFLPNICTVLNISESKLQKDLEIYRGNLDKIAQVRQAMDDILE 210
BLAST of EX570852 vs. TAIR peptide
Match: AT2G20890.1 (| Symbols: PSB29, THF1 | photosystem II reaction center PSB29 protein | chr2:8987783-8989185 FORWARD LENGTH=300) HSP 1 Score: 164.851 bits (416), Expect = 3.358e-41 Identity = 82/120 (68.33%), Postives = 99/120 (82.50%), Query Frame = 1 Query: 4 STSLIEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAVGLFRLLELANAMEPTILEKLCAALNINKRSVDRDLDVYRNLLSKLVQAKELLKEFIDXXXXXXXXXTEPQKANEAITK*FG 363 S SL++FSS+EG++E +LKDIA RAG K FSYSRFFAVGLFRLLELA+A +PT+L+KLCA+LNINK+SVDRDLDVYRNLLSKLVQAKELLKE+++ + QKANE I+K G Sbjct: 167 SASLVDFSSKEGDIEAVLKDIAGRAGSKEGFSYSRFFAVGLFRLLELASATDPTVLDKLCASLNINKKSVDRDLDVYRNLLSKLVQAKELLKEYVEREKKKQGERAQSQKANETISKCLG 286 The following BLAST results are available for this feature:
BLAST of EX570852 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of EX570852 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 4
BLAST of EX570852 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EX570852 ID=EX570852; Name=EX570852; organism=Pisum sativum; type=EST; length=633bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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