EX571154

EST Overview
NameEX571154
Unique NameEX571154
TypeEST
OrganismPisum sativum (pea)
Sequence length477
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of EX571154 vs. TrEMBL
Match: A2Q516_MEDTR (SAM (And some other nucleotide) binding motif OS=Medicago truncatula GN=MtrDRAFT_AC158497g19v2 PE=4 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 7.605e-26
Identity = 56/69 (81.16%), Postives = 58/69 (84.06%), Query Frame = 2
Query:   50 LTPYEVREEKMESFHGDDDGSNGSLSRKRRQCSDGNYVLSDSTSSVMARPCGEARGHTGYLTFARLKCF 256
            L  YEVRE K +SFHGDD   NGSL  KRRQCSDGNYVLS+ TSSVMARPC EARGHTGYLTFARLKCF
Sbjct:  241 LRTYEVREVKTKSFHGDD---NGSLPCKRRQCSDGNYVLSNPTSSVMARPCDEARGHTGYLTFARLKCF 306          

HSP 2 Score: 28.8758 bits (63), Expect = 7.605e-26
Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = 1
Query:    1 RSCDALQSCFTE 36
            RSCDALQSCFT+
Sbjct:  222 RSCDALQSCFTD 233          
BLAST of EX571154 vs. TrEMBL
Match: C6TDR8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.987e-13
Identity = 42/60 (70.00%), Postives = 46/60 (76.67%), Query Frame = 2
Query:   80 MESFHGDDDGSNGSLSRKRRQCSDGNYVLSDST---SSVMARPCGEARGHTGYLTFARLK 250
            M+S  GD    NGSL  KRRQCSDG+YVLS S+   SSVMA PCGEA GHTGYLTFAR+K
Sbjct:    1 MQSLCGD---GNGSLPSKRRQCSDGSYVLSSSSPSISSVMASPCGEAGGHTGYLTFARVK 57          
BLAST of EX571154 vs. TrEMBL
Match: B9S623_RICCO (tRNA, putative OS=Ricinus communis GN=RCOM_1063210 PE=4 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.528e-12
Identity = 42/70 (60.00%), Postives = 51/70 (72.86%), Query Frame = 2
Query:   50 LTPYEVREEKMESFHGDDDGSNGSLSRKRRQ-CSDGNYVLSDSTSSV-MARPCGEARGHTGYLTFARLKC 253
            L  YEVRE KM+   G++  S GS   KRRQ  S+G+ V + S+S V MARPCG++RGHTGYLTFARLKC
Sbjct:  240 LRTYEVREVKMDCGQGEEGISLGSPPYKRRQRSSEGSNVQNSSSSPVIMARPCGDSRGHTGYLTFARLKC 309          
BLAST of EX571154 vs. TrEMBL
Match: B9IMM5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_835969 PE=4 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.302e-12
Identity = 39/70 (55.71%), Postives = 48/70 (68.57%), Query Frame = 2
Query:   50 LTPYEVREEKMESFHGDDDGSNGSLSRKRRQCSDGNYVLSDSTSS--VMARPCGEARGHTGYLTFARLKC 253
            L  +EV E KM+S  GD+  S GS   KRRQ S    ++ DS+SS  + ARPC +ARGHTGYLTF+RLKC
Sbjct:  240 LRTFEVHEGKMDSCQGDEGVSVGSPPYKRRQRSSEGSIVQDSSSSPTIKARPCADARGHTGYLTFSRLKC 309          
BLAST of EX571154 vs. TrEMBL
Match: Q84K50_ARATH (Putative uncharacterized protein At5g14600 OS=Arabidopsis thaliana GN=At5g14600 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.299e-8
Identity = 36/77 (46.75%), Postives = 46/77 (59.74%), Query Frame = 2
Query:   50 LTPYEVREEKMESF----HGDDDGSNGSLSRKRRQCSDGNYVLSDSTSS-----VMARPCGEARGHTGYLTFARLKC 253
            L  YEV+E KM++        ++ + G    KR+  S+ N  +S   SS     VMARPC EARGHTGYLTFARL+C
Sbjct:  240 LRTYEVKEVKMDTSSMVGESHEEDNEGMRPCKRKHRSNENDTVSQDNSSNASSVVMARPCSEARGHTGYLTFARLQC 316          
BLAST of EX571154 vs. TrEMBL
Match: A5B859_VITVI (Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_033584 PE=4 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 6.445e-8
Identity = 35/68 (51.47%), Postives = 43/68 (63.24%), Query Frame = 2
Query:   50 LTPYEVREEKMESFHGDDDGSNGSLSRKRRQCSD--GNYVLSDSTSSVMARPCGEARGHTGYLTFARL 247
            L  YEVRE KM+   G++ G  G    KRRQ S    N     ++++VMARP  EARGHTG+LTFARL
Sbjct:  307 LRTYEVREGKMDCSQGNEGGFLGPRPGKRRQRSGEASNEGEIPTSTTVMARPAAEARGHTGFLTFARL 374          
BLAST of EX571154 vs. TrEMBL
Match: A3ASF2_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_14292 PE=4 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 1.266e-7
Identity = 30/69 (43.48%), Postives = 43/69 (62.32%), Query Frame = 2
Query:   50 LTPYEVREEKMESFHGDDDGSNGSLSRKRRQCSDGNYVLS--DSTSSVMARPCGEARGHTGYLTFARLK 250
            L  YEVRE  ++    +++ +   L++K+R+       L    ++SSVM RPC  ARGHTGYLTFARL+
Sbjct:  271 LRTYEVREGGLKGATTNEESNAVPLAQKKRKLLAAAETLDVKQNSSSVMVRPCSTARGHTGYLTFARLR 339          

HSP 2 Score: 23.8682 bits (50), Expect = 1.266e-7
Identity = 7/12 (58.33%), Postives = 12/12 (100.00%), Query Frame = 1
Query:    1 RSCDALQSCFTE 36
            R+C+A++SCFT+
Sbjct:  252 RACEAMRSCFTD 263          
BLAST of EX571154 vs. TrEMBL
Match: Q7XTH1_ORYSJ (OSJNBb0026L04.5 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0026L04.5 PE=2 SV=2)

HSP 1 Score: 55.4546 bits (132), Expect = 1.268e-7
Identity = 30/69 (43.48%), Postives = 43/69 (62.32%), Query Frame = 2
Query:   50 LTPYEVREEKMESFHGDDDGSNGSLSRKRRQCSDGNYVLS--DSTSSVMARPCGEARGHTGYLTFARLK 250
            L  YEVRE  ++    +++ +   L++K+R+       L    ++SSVM RPC  ARGHTGYLTFARL+
Sbjct:  255 LRTYEVREGGLKGATTNEESNAVPLAQKKRKLLAAAETLDVKQNSSSVMVRPCSTARGHTGYLTFARLR 323          

HSP 2 Score: 23.8682 bits (50), Expect = 1.268e-7
Identity = 7/12 (58.33%), Postives = 12/12 (100.00%), Query Frame = 1
Query:    1 RSCDALQSCFTE 36
            R+C+A++SCFT+
Sbjct:  236 RACEAMRSCFTD 247          
BLAST of EX571154 vs. TrEMBL
Match: Q01M41_ORYSA (H0725E11.5 protein OS=Oryza sativa GN=H0725E11.5 PE=4 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 1.268e-7
Identity = 30/69 (43.48%), Postives = 43/69 (62.32%), Query Frame = 2
Query:   50 LTPYEVREEKMESFHGDDDGSNGSLSRKRRQCSDGNYVLS--DSTSSVMARPCGEARGHTGYLTFARLK 250
            L  YEVRE  ++    +++ +   L++K+R+       L    ++SSVM RPC  ARGHTGYLTFARL+
Sbjct:  255 LRTYEVREGGLKGATTNEESNAVPLAQKKRKLLAAAETLDVKQNSSSVMVRPCSTARGHTGYLTFARLR 323          

HSP 2 Score: 23.8682 bits (50), Expect = 1.268e-7
Identity = 7/12 (58.33%), Postives = 12/12 (100.00%), Query Frame = 1
Query:    1 RSCDALQSCFTE 36
            R+C+A++SCFT+
Sbjct:  236 RACEAMRSCFTD 247          
BLAST of EX571154 vs. TrEMBL
Match: A2WPJ2_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_01770 PE=4 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 1.268e-7
Identity = 30/69 (43.48%), Postives = 43/69 (62.32%), Query Frame = 2
Query:   50 LTPYEVREEKMESFHGDDDGSNGSLSRKRRQCSDGNYVLS--DSTSSVMARPCGEARGHTGYLTFARLK 250
            L  YEVRE  ++    +++ +   L++K+R+       L    ++SSVM RPC  ARGHTGYLTFARL+
Sbjct:  255 LRTYEVREGGLKGATTNEESNAVPLAQKKRKLLAAAETLDVKQNSSSVMVRPCSTARGHTGYLTFARLR 323          

HSP 2 Score: 23.8682 bits (50), Expect = 1.268e-7
Identity = 7/12 (58.33%), Postives = 12/12 (100.00%), Query Frame = 1
Query:    1 RSCDALQSCFTE 36
            R+C+A++SCFT+
Sbjct:  236 RACEAMRSCFTD 247          
BLAST of EX571154 vs. TAIR peptide
Match: AT5G14600.1 (| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr5:4707518-4709022 FORWARD LENGTH=318)

HSP 1 Score: 62.7734 bits (151), Expect = 1.045e-10
Identity = 36/77 (46.75%), Postives = 46/77 (59.74%), Query Frame = 2
Query:   50 LTPYEVREEKMESF----HGDDDGSNGSLSRKRRQCSDGNYVLSDSTSS-----VMARPCGEARGHTGYLTFARLKC 253
            L  YEV+E KM++        ++ + G    KR+  S+ N  +S   SS     VMARPC EARGHTGYLTFARL+C
Sbjct:  240 LRTYEVKEVKMDTSSMVGESHEEDNEGMRPCKRKHRSNENDTVSQDNSSNASSVVMARPCSEARGHTGYLTFARLQC 316          
The following BLAST results are available for this feature:
BLAST of EX571154 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
A2Q516_MEDTR7.605e-2681.16SAM (And some other nucleotide) binding motif OS=M... [more]
C6TDR8_SOYBN2.987e-1370.00Putative uncharacterized protein OS=Glycine max PE... [more]
B9S623_RICCO2.528e-1260.00tRNA, putative OS=Ricinus communis GN=RCOM_1063210... [more]
B9IMM5_POPTR3.302e-1255.71Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q84K50_ARATH1.299e-846.75Putative uncharacterized protein At5g14600 OS=Arab... [more]
A5B859_VITVI6.445e-851.47Putative uncharacterized protein (Fragment) OS=Vit... [more]
A3ASF2_ORYSJ1.266e-743.48Putative uncharacterized protein OS=Oryza sativa s... [more]
Q7XTH1_ORYSJ1.268e-743.48OSJNBb0026L04.5 protein OS=Oryza sativa subsp. jap... [more]
Q01M41_ORYSA1.268e-743.48H0725E11.5 protein OS=Oryza sativa GN=H0725E11.5 P... [more]
A2WPJ2_ORYSI1.268e-743.48Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of EX571154 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G14600.11.045e-1046.75| Symbols: | S-adenosyl-L-methionine-dependent me... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014816tRNA methyltransferase complex GCD14 subunitPFAMPF08704GCD14coord: 22..67
score: 6.1
NoneNo IPR availableSEGsegsegcoord: 55..67
score
NoneNo IPR availableSEGsegsegcoord: 29..34
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX571154 ID=EX571154; Name=EX571154; organism=Pisum sativum; type=EST; length=477bp
CGATCGTGTGATGCTCTTCAGTCCTGCTTCACAGAACATTTGAGGTACTC
TTACGCCATATGAAGTTCGGGAAGAGAAAATGGAAAGCTTTCATGGAGAT
GACGATGGTTCTAATGGTTCTCTTTCTCGCAAGAGGAGACAGTGTTCAGA
TGGAAACTATGTTCTCAGCGATTCTACTTCTTCTGTCATGGCTAGACCTT
GTGGTGAAGCTCGAGGTCACACAGGCTATTTGACATTTGCAAGACTTAAA
TGCTTTTTATGACCAGGTTCTTCAATCATGTCCTTCAATTTTGGTAGCAG
AGAAAAACTATTGTATTCTTCGTACTTTTCAATTTGAGCATGATGCAAGA
AATTGTTGTTGTTGTTGTTTGTTATAAACTTAAAATTATAGGTTTTGAAA
GGGAGTTTTTTGTATATCTTATGTGCATGGCTACAAACATGCCTGAGAAA
ATACTAAACAGTGCGAAAATATGTGAG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0016429obsolete tRNA (adenine-N1)-methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0030488tRNA methylation
Vocabulary: INTERPRO
TermDefinition
IPR014816tRNA_MeTrfase_Gcd14