FG530560

EST Overview
NameFG530560
Unique NameFG530560
TypeEST
OrganismPisum sativum (pea)
Sequence length644
Libraries
Library NameType
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of FG530560 vs. TrEMBL
Match: B9R880_RICCO (Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_1597570 PE=4 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 4.374e-56
Identity = 119/191 (62.30%), Postives = 127/191 (66.49%), Query Frame = 3
Query:   78 PSSWDQIKNILTCKQIEGSTVHDPSKPNNXXXXXXXXXXXXXX--FRDAVHGNTRVVHRSDNSSPESSILGQETSLLKRKPVXXXXXXXXXXXXXXXXXCXXXXXXXXXXXXXXXRGMQFRKLSGCYECHMIVDPSRLAIPRSTVCACDQCGEVFPKIESLQLHQAVRHAVSELGPEDSGRNIVEIIFKSS 644
            PSSWDQIKN+LTCKQIEGS+VHDPSK +N                FRD VHGNTRVVHR+DNS PESS +GQET LL RK                                   RGMQFRKLSGCYECHMIVDPSR   PR+T+C C QCGEVFPK ESL+LHQ VRHAVSELGPEDSGRNIVEIIFKSS
Sbjct:   32 PSSWDQIKNLLTCKQIEGSSVHDPSKNSNNIGYSKLGSSCSSICSFRDIVHGNTRVVHRADNS-PESSTVGQETGLLSRKATGGSSTRTLGGSGRSNGGATYSSHVSSS------RGMQFRKLSGCYECHMIVDPSRYPAPRTTICTCAQCGEVFPKTESLELHQKVRHAVSELGPEDSGRNIVEIIFKSS 215          
BLAST of FG530560 vs. TrEMBL
Match: B9GQV9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_550893 PE=4 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.835e-55
Identity = 119/189 (62.96%), Postives = 125/189 (66.14%), Query Frame = 3
Query:   78 PSSWDQIKNILTCKQIEGSTVHDPSKPNNXXXXXXXXXXXXXXFRDAVHGNTRVVHRSDNSSPESSILGQETSLLKRKPVXXXXXXXXXXXXXXXXXCXXXXXXXXXXXXXXXRGMQFRKLSGCYECHMIVDPSRLAIPRSTVCACDQCGEVFPKIESLQLHQAVRHAVSELGPEDSGRNIVEIIFKSS 644
            PSSWDQIKN+LTCKQIEGS VHDPSK                 F+D VHGNTRVVHR+DNS PESS LGQET LL RK V                                 RGMQFRKLSGCYECHMIVDPSR    R+T+ AC QCGEVFPKIESL+LHQ VRHAVSELGPEDSGRNIVEIIFKSS
Sbjct:   35 PSSWDQIKNLLTCKQIEGSRVHDPSKNPIGYSKLGSSCSSICSFKDVVHGNTRVVHRADNS-PESSTLGQETGLLSRKGVSTGSSSTRSLTSSGRSNSGVTCSSSS-------RGMQFRKLSGCYECHMIVDPSRYPSARTTISACTQCGEVFPKIESLELHQKVRHAVSELGPEDSGRNIVEIIFKSS 215          
BLAST of FG530560 vs. TrEMBL
Match: Q9LR10_ARATH (F10A5.10 OS=Arabidopsis thaliana GN=At1g75710 PE=4 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.357e-48
Identity = 115/201 (57.21%), Postives = 121/201 (60.20%), Query Frame = 3
Query:   78 PSSWDQIKNILTCKQIEGSTVHDPSK---------PNNXXXXXXXXXXXXXXFRDAVHGNTRVVHRSDNSSP--ESSILGQETSLLKRKPVXXXXXXXXXXXXXXXXXCXXXXXXXXXXXXXXXRGMQFRKLSGCYECHMIVDPSRLAI-PRSTVCACDQCGEVFPKIESLQLHQAVRHAVSELGPEDSGRNIVEIIFKSS 644
            PSSWDQIKN+LTCKQIEGS VHDPSK          N               FRD  HGNTRVVHR+D+S     S+    ET LL RKP                                  R MQFRKLSGCYECHMIVDPSR  I PR  VCAC QCGEVFPK+ESL+LHQAVRHAVSELGPEDSGRNIVEIIFKSS
Sbjct:   53 PSSWDQIKNLLTCKQIEGSRVHDPSKNSQSGPSMTTNLSPSKLGSSCSSICSFRDVAHGNTRVVHRADHSPDVGNSATPNSETRLLTRKPGQHGSSSSRSLTSGSTRS--NASGSYTSSSTTSFRAMQFRKLSGCYECHMIVDPSRYPISPR--VCACSQCGEVFPKLESLELHQAVRHAVSELGPEDSGRNIVEIIFKSS 249          
BLAST of FG530560 vs. TrEMBL
Match: D7KT60_ARALY (Zinc finger family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_476719 PE=4 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.276e-47
Identity = 113/201 (56.22%), Postives = 122/201 (60.70%), Query Frame = 3
Query:   78 PSSWDQIKNILTCKQIEGSTVHDPSKPNNXXXXXXXXXXXXXX---------FRDAVHGNTRVVHRSDNSSPESSILG--QETSLLKRKPVXXXXXXXXXXXXXXXXXCXXXXXXXXXXXXXXXRGMQFRKLSGCYECHMIVDPSRLAI-PRSTVCACDQCGEVFPKIESLQLHQAVRHAVSELGPEDSGRNIVEIIFKSS 644
            PSSWDQIKN+LTCKQIEGS VHDPSK +                        FRD  HGNTRVVHR+D+S   ++ +    ET LL RKP                                  R MQFRKLSGCYECHMIVDPSR  I PR  VCAC QCGEVFPK+ESL+LHQAVRHAVSELGPEDSGRNIVEIIFKSS
Sbjct:   56 PSSWDQIKNLLTCKQIEGSRVHDPSKNSQVGPSMTTHLSPSKLGSSCSSICSFRDVAHGNTRVVHRADHSPDVANSVAPNSETRLLTRKPGQHGSSSSRSLTSGSTRS--NASGSYTSSSTTSFRAMQFRKLSGCYECHMIVDPSRYPISPR--VCACSQCGEVFPKLESLELHQAVRHAVSELGPEDSGRNIVEIIFKSS 252          
BLAST of FG530560 vs. TrEMBL
Match: D7KBX8_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_681738 PE=4 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.142e-46
Identity = 107/189 (56.61%), Postives = 120/189 (63.49%), Query Frame = 3
Query:   81 SSWDQIKNILTCKQIEGSTVHDPSKPNNXXXXXXXXXXXXXXFRDAVHGNTRVVHRSDNSSPESSILGQETSLLKRKPVXXXXXXXXXXXXXXXXXCXXXXXXXXXXXXXXXRGMQFRKLSGCYECHMIVDPSRLAI-PRSTVCACDQCGEVFPKIESLQLHQAVRHAVSELGPEDSGRNIVEIIFKSS 644
            SSW QIKN+L+CKQIEG  VH+PSK  +              F D V+GN RV+HRSD+S PESS LGQ+  LL RKPV                                 + M FR LSGCYECHMIVDPSR  I PR  +CAC QCGEVFPK+E+L+LHQAVRHAVSELGPEDSGRNIVEIIFKSS
Sbjct:   56 SSWSQIKNLLSCKQIEGPRVHEPSKITSSSCGTSLCR-----FSDVVYGNARVIHRSDHS-PESSNLGQDARLLTRKPVTRGSSSSVRSNGCGAYTSYSTS-----------KAMHFRNLSGCYECHMIVDPSRYPIAPR--ICACPQCGEVFPKLETLELHQAVRHAVSELGPEDSGRNIVEIIFKSS 225          
BLAST of FG530560 vs. TrEMBL
Match: Q9FZG6_ARATH (Putative uncharacterized protein At1g47860 OS=Arabidopsis thaliana GN=At1g47860 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 9.141e-46
Identity = 105/189 (55.56%), Postives = 120/189 (63.49%), Query Frame = 3
Query:   81 SSWDQIKNILTCKQIEGSTVHDPSKPNNXXXXXXXXXXXXXXFRDAVHGNTRVVHRSDNSSPESSILGQETSLLKRKPVXXXXXXXXXXXXXXXXXCXXXXXXXXXXXXXXXRGMQFRKLSGCYECHMIVDPSRLAI-PRSTVCACDQCGEVFPKIESLQLHQAVRHAVSELGPEDSGRNIVEIIFKSS 644
            SSW QIKN+L+CKQIEG  VH+PSK  +              F D ++GN RV+HRSD+S PESS LGQ+T LL RKP+                                 + M FR LSGCYECHMIVDPSR  I PR  +CAC QCGEVFPK+ESL+ HQAVRHAVSELGPEDSGRNIV+IIFKSS
Sbjct:   52 SSWSQIKNLLSCKQIEGPRVHEPSKITSSSCGSSLCK-----FSDVIYGNARVIHRSDHS-PESSNLGQDTRLLTRKPISTRGSSSSVRSNGCGAYTSYSTS----------KAMHFRNLSGCYECHMIVDPSRYPIAPR--ICACPQCGEVFPKLESLEHHQAVRHAVSELGPEDSGRNIVDIIFKSS 222          
BLAST of FG530560 vs. TrEMBL
Match: Q8GXQ5_ARATH (Putative uncharacterized protein At1g75710/F10A5_26 OS=Arabidopsis thaliana GN=At1g75710/F10A5_26 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.257e-36
Identity = 94/180 (52.22%), Postives = 100/180 (55.56%), Query Frame = 3
Query:   78 PSSWDQIKNILTCKQIEGSTVHDPSK---------PNNXXXXXXXXXXXXXXFRDAVHGNTRVVHRSDNSSP--ESSILGQETSLLKRKPVXXXXXXXXXXXXXXXXXCXXXXXXXXXXXXXXXRGMQFRKLSGCYECHMIVDPSRLAI-PRSTVCACDQCGEVFPKIESLQLHQAVRHA 581
            PSSWDQIKN+LTCKQIEGS VHDPSK          N               FRD  HGNTRVVHR+D+S     S+    ET LL RKP                                  R MQFRKLSGCYECHMIVDPSR  I PR  VCAC QCGEVFPK+ESL+LHQAVRHA
Sbjct:   53 PSSWDQIKNLLTCKQIEGSRVHDPSKNSQSGPSMTTNLSPSKLGSSCSSICSFRDVAHGNTRVVHRADHSPDVGNSATPNSETRLLTRKPGQHGSSSSRSLTSGSTRS--NASGSYTSSSTTSFRAMQFRKLSGCYECHMIVDPSRYPISPR--VCACSQCGEVFPKLESLELHQAVRHA 228          
BLAST of FG530560 vs. TrEMBL
Match: B9H4W1_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_715429 PE=4 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.032e-30
Identity = 64/74 (86.49%), Postives = 67/74 (90.54%), Query Frame = 3
Query:  423 MQFRKLSGCYECHMIVDPSRLAIPRSTVCACDQCGEVFPKIESLQLHQAVRHAVSELGPEDSGRNIVEIIFKSS 644
            MQFRKLSGCYECHMIVDPSR    R+T+ AC QCGEVFPKIESL+LHQ VRHAVSELGPEDSGRNIVEIIFKSS
Sbjct:    1 MQFRKLSGCYECHMIVDPSRYPSARTTISACAQCGEVFPKIESLELHQKVRHAVSELGPEDSGRNIVEIIFKSS 74          
BLAST of FG530560 vs. TrEMBL
Match: B8LQN9_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.241e-26
Identity = 78/196 (39.80%), Postives = 96/196 (48.98%), Query Frame = 3
Query:   81 SSWDQIKNILTCKQIEGSTVHDPSKPNNXXXXXXXXXXXXXX----FRDAVHGNTRVVHRSDNSSPESSILGQETSLLKRKPVXXXXXXXXXXXXXXXXXCXXXXXXXXXXXXXXXRGMQFRKLSGCYECHMIVDP----SRLAIPRSTVCACDQCGEVFPKIESLQLHQAVRHAVSELGPEDSGRNIVEIIFKSS 644
            SSW  IK  LTCK ++ + VHDP K                      RD VHGNTRV+HR + S   SS   QE  +     V                                 RG+  RK SGCYECH+IVDP    SR A  R+T+ AC  CGE+  K E+L+ HQA +HAVSEL  +DS RNIV+IIF++S
Sbjct:   43 SSWSSIKKFLTCK-LDTNEVHDPKKETKQSLKKCYHNIGCSGSFYSLRDIVHGNTRVMHRPETSPENSSRSSQEIVVSDHSRVSMGSSTRSL--------ASPKPQFTIHEAQGSFRGVHLRKFSGCYECHVIVDPFEAMSRDASLRTTIYACPICGEICSKCEALEQHQATKHAVSELAQDDSARNIVDIIFQTS 229          
BLAST of FG530560 vs. TrEMBL
Match: B9RJ95_RICCO (Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_1032360 PE=4 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.326e-23
Identity = 52/80 (65.00%), Postives = 64/80 (80.00%), Query Frame = 3
Query:  417 RGMQFRKLSGCYECHMIVDP----SRLAIPRSTVCACDQCGEVFPKIESLQLHQAVRHAVSELGPEDSGRNIVEIIFKSS 644
            RGM FR+ SGCYEC M+VDP    +R    RS++C+C  CGE+F K E+L+LHQAVRHAVSELGPED+ +NIVEIIF+SS
Sbjct:  172 RGMPFRRFSGCYECRMVVDPVLGFTRDPSLRSSICSCPDCGEIFVKAENLELHQAVRHAVSELGPEDTSKNIVEIIFQSS 251          
BLAST of FG530560 vs. TAIR peptide
Match: AT1G75710.1 (| Symbols: | C2H2-like zinc finger protein | chr1:28428806-28431128 FORWARD LENGTH=462)

HSP 1 Score: 195.282 bits (495), Expect = 2.380e-50
Identity = 115/201 (57.21%), Postives = 121/201 (60.20%), Query Frame = 3
Query:   78 PSSWDQIKNILTCKQIEGSTVHDPSK---------PNNXXXXXXXXXXXXXXFRDAVHGNTRVVHRSDNSSP--ESSILGQETSLLKRKPVXXXXXXXXXXXXXXXXXCXXXXXXXXXXXXXXXRGMQFRKLSGCYECHMIVDPSRLAI-PRSTVCACDQCGEVFPKIESLQLHQAVRHAVSELGPEDSGRNIVEIIFKSS 644
            PSSWDQIKN+LTCKQIEGS VHDPSK          N               FRD  HGNTRVVHR+D+S     S+    ET LL RKP                                  R MQFRKLSGCYECHMIVDPSR  I PR  VCAC QCGEVFPK+ESL+LHQAVRHAVSELGPEDSGRNIVEIIFKSS
Sbjct:   53 PSSWDQIKNLLTCKQIEGSRVHDPSKNSQSGPSMTTNLSPSKLGSSCSSICSFRDVAHGNTRVVHRADHSPDVGNSATPNSETRLLTRKPGQHGSSSSRSLTSGSTRS--NASGSYTSSSTTSFRAMQFRKLSGCYECHMIVDPSRYPISPR--VCACSQCGEVFPKLESLELHQAVRHAVSELGPEDSGRNIVEIIFKSS 249          
BLAST of FG530560 vs. TAIR peptide
Match: AT2G29660.1 (| Symbols: | zinc finger (C2H2 type) family protein | chr2:12679346-12680467 FORWARD LENGTH=373)

HSP 1 Score: 56.6102 bits (135), Expect = 1.321e-8
Identity = 26/43 (60.47%), Postives = 33/43 (76.74%), Query Frame = 3
Query:  513 CDQCGEVFPKIESLQLHQAVRHAVSELGPEDSGRNIVEIIFKS 641
            C+ CGE+FPKI  L+ H A++HAVSEL   +S  NIV+IIFKS
Sbjct:  128 CNSCGEIFPKINLLENHIAIKHAVSELIAGESSTNIVKIIFKS 170          
The following BLAST results are available for this feature:
BLAST of FG530560 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9R880_RICCO4.374e-5662.30Nucleic acid binding protein, putative OS=Ricinus ... [more]
B9GQV9_POPTR2.835e-5562.96Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q9LR10_ARATH3.357e-4857.21F10A5.10 OS=Arabidopsis thaliana GN=At1g75710 PE=4... [more]
D7KT60_ARALY1.276e-4756.22Zinc finger family protein OS=Arabidopsis lyrata s... [more]
D7KBX8_ARALY3.142e-4656.61Predicted protein OS=Arabidopsis lyrata subsp. lyr... [more]
Q9FZG6_ARATH9.141e-4655.56Putative uncharacterized protein At1g47860 OS=Arab... [more]
Q8GXQ5_ARATH2.257e-3652.22Putative uncharacterized protein At1g75710/F10A5_2... [more]
B9H4W1_POPTR7.032e-3086.49Predicted protein (Fragment) OS=Populus trichocarp... [more]
B8LQN9_PICSI1.241e-2639.80Putative uncharacterized protein OS=Picea sitchens... [more]
B9RJ95_RICCO8.326e-2365.00Nucleic acid binding protein, putative OS=Ricinus ... [more]
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BLAST of FG530560 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G75710.12.380e-5057.21| Symbols: | C2H2-like zinc finger protein | chr1... [more]
AT2G29660.11.321e-860.47| Symbols: | zinc finger (C2H2 type) family prote... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 4..26
score
NoneNo IPR availableSEGsegsegcoord: 4..24
score: NAcoord: 55..68
score: NAcoord: 106..122
score: NAcoord: 124..138
score
IPR007087Zinc finger, C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 169..192
score
IPR007087Zinc finger, C2H2-typePROFILEPS50157ZINC_FINGER_C2H2_2coord: 169..197
score: 8

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG530560 ID=FG530560; Name=FG530560; organism=Pisum sativum; type=EST; length=644bp
AACACAACCCTCAACAACAACAACAACTGAATCAAAAGCAAAAGCAAAAA
CAGAAACAGAAACAAAAACAAAAGCCACCATCTTCATGGGACCAAATCAA
AAACATCCTAACTTGCAAACAGATCGAAGGCTCCACCGTTCACGATCCTT
CAAAACCAAACAACAGTTACTCAAAACTAGGTTCATCTTGTAGCTCAATT
TGTAGCTTCAGAGATGCCGTTCATGGAAACACTCGAGTTGTTCATAGGTC
TGATAATTCATCCCCAGAAAGTAGCATCTTAGGTCAAGAAACAAGTTTAC
TCAAAAGAAAACCCGTCACTACCACTGCTTCATCGTCATCATCATCAAGA
ACTCGCTCTTCTGCATCATGTTCTGGGAAATCCAACGGTGGAAATAACTA
CACGTCATCATCTTCCAGAGGAATGCAGTTTAGAAAACTCTCTGGATGTT
ATGAATGTCACATGATCGTTGACCCTAGCAGGTTAGCAATTCCTAGGAGC
ACAGTGTGTGCTTGTGATCAATGTGGAGAGGTTTTCCCTAAGATTGAAAG
CTTGCAGCTTCATCAAGCTGTTCGTCATGCTGTTTCAGAGCTGGGTCCGG
AAGATTCGGGTCGGAACATAGTGGAAATAATATTCAAGTCAAGC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular anatomical structure
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR007087Znf_C2H2