FG532351

EST Overview
NameFG532351
Unique NameFG532351
TypeEST
OrganismPisum sativum (pea)
Sequence length416
Libraries
Library NameType
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of FG532351 vs. TrEMBL
Match: D7TW41_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_25.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019815001 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 9.946e-9
Identity = 42/80 (52.50%), Postives = 48/80 (60.00%), Query Frame = 3
Query:    6 KLGRQVDLRESGPNPRQTFLEDPELAHAVSLSLKTAEQEKARRVQEGDVGAPTAG-PSKAPAVELGEV-SSNGRLQAGSL 239
            + G   +L   GP  R + LED  LA AVSLSLKTAEQEKA R Q G+VGA   G  S A   EL E+ + NGR   GSL
Sbjct:  359 QFGAHNELSNPGPQQRPSHLEDAALARAVSLSLKTAEQEKALREQGGEVGASELGADSPAEVEELRELPAPNGRQGFGSL 438          
BLAST of FG532351 vs. TrEMBL
Match: A5AY41_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004395 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 9.946e-9
Identity = 42/80 (52.50%), Postives = 48/80 (60.00%), Query Frame = 3
Query:    6 KLGRQVDLRESGPNPRQTFLEDPELAHAVSLSLKTAEQEKARRVQEGDVGAPTAG-PSKAPAVELGEV-SSNGRLQAGSL 239
            + G   +L   GP  R + LED  LA AVSLSLKTAEQEKA R Q G+VGA   G  S A   EL E+ + NGR   GSL
Sbjct:  228 QFGAHNELSNPGPQQRPSHLEDAALARAVSLSLKTAEQEKALREQGGEVGASELGADSPAEVEELRELPAPNGRQGFGSL 307          
BLAST of FG532351 vs. TrEMBL
Match: B9GW72_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_554317 PE=4 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.436e-7
Identity = 38/78 (48.72%), Postives = 46/78 (58.97%), Query Frame = 3
Query:   24 DLRESGPNPRQTFLEDPELAHAVSLSLKTAEQEKARRVQEGDVGAPTAGPSKAPAVELGE---VSSNGRLQAGSLSFK 248
            +L E+GP  RQ+  ED EL H  SLSLKTAEQEK    Q G VG    G +   AVE G+    +SNG  +AGS S +
Sbjct:  228 ELTETGPQQRQSHGEDAELEHVDSLSLKTAEQEKTLHGQRGKVGPSEVGDN---AVEEGQGKIAASNGGQEAGSSSIQ 302          
The following BLAST results are available for this feature:
BLAST of FG532351 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
D7TW41_VITVI9.946e-952.50Whole genome shotgun sequence of line PN40024, sca... [more]
A5AY41_VITVI9.946e-952.50Putative uncharacterized protein OS=Vitis vinifera... [more]
B9GW72_POPTR1.436e-748.72Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 83..92
score: NAcoord: 96..107
score
NoneNo IPR availableSEGsegsegcoord: 22..32
score: NAcoord: 36..45
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG532351 ID=FG532351; Name=FG532351; organism=Pisum sativum; type=EST; length=416bp
ATCACAAACTTGGCAGACAAGTTGACTTAAGGGAATCTGGGCCTAACCCA
AGGCAAACATTTTTGGAGGATCCTGAGCTTGCCCATGCAGTTTCATTGTC
CTTGAAGACAGCAGAGCAAGAAAAAGCAAGACGTGTACAAGAAGGTGATG
TTGGAGCACCTACAGCAGGACCATCTAAGGCACCAGCGGTTGAATTAGGG
GAAGTATCTTCAAATGGAAGATTGCAGGCAGGAAGCTTATCCTTTAAAGA
TGAAGATGAAGATGTAGATGTAGAGGAGATGCCTTTGGTTAGGAACAGGT
CTAGAAATGTATCAGTCAGCTCCACAGCACTGGGCAAAGAGGCTGATTTC
ATTGNATCTAGCACACTGCCAAGCACAACAATTCAGGAAAGCAGCAGTCC
TCCTTCGCAAAATGAT
back to top