FG532467

EST Overview
NameFG532467
Unique NameFG532467
TypeEST
OrganismPisum sativum (pea)
Sequence length470
Libraries
Library NameType
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of FG532467 vs. TrEMBL
Match: D7U594_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024072001 PE=4 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.704e-21
Identity = 66/139 (47.48%), Postives = 79/139 (56.83%), Query Frame = 1
Query:   25 AEFPSLXXXXXXXXXXXXXQTLSLAEFTA---------KPVSSFTHQDPVVLPTGPRQRTAEEIESDRTRLGGGFRSYGDRPNRGSGGDEXXXXXXXXXXXXXELRRNDSFGSRDSNRETAPSRADEIDNWAAAKKPAV 414
            A+FP+L             QTLSL+EF+A               TH+D ++LPTGPRQR+AEE+  DR RLGGGFRSYG   + GSG +E               RR   FG RDS+RE APSRADEID+W AAKK  V
Sbjct:   21 ADFPTLATAAATKSKKKKGQTLSLSEFSAFGAGKSAQPSQTKGLTHEDLMMLPTGPRQRSAEEL--DRGRLGGGFRSYG---SNGSGSEE---------------RRQGGFG-RDSSRELAPSRADEIDDWGAAKKSTV 138          
BLAST of FG532467 vs. TrEMBL
Match: A5BQN4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029831 PE=4 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.327e-20
Identity = 65/143 (45.45%), Postives = 77/143 (53.85%), Query Frame = 1
Query:   25 AEFPSLXXXXXXXXXXXXXQTLSLAEFTA---------KPVSSFTHQDPVVLPTGPRQRTAEEIESDRTRLGGGFRSYGDRPNRGSG----GDEXXXXXXXXXXXXXELRRNDSFGSRDSNRETAPSRADEIDNWAAAKKPAV 414
            A+FP+L             QTLSL+EF+A               TH+D ++LPTGPRQR+AEE+  DR RLGGGFRSYG   +   G    G               E RR   FG RDS+RE APSRADEID+W AAKK  V
Sbjct:   51 ADFPTLATAAATKSKKKKGQTLSLSEFSAFGAGKSAQPSQTKGLTHEDLMMLPTGPRQRSAEEL--DRGRLGGGFRSYGSNGSYEGGRSRYGGGEDSANPRWGPRGSEERRQGGFG-RDSSRELAPSRADEIDDWGAAKKSTV 190          
BLAST of FG532467 vs. TrEMBL
Match: Q9SZP8_ARATH (Putative uncharacterized protein AT4g38710 OS=Arabidopsis thaliana GN=F20M13.270 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.002e-16
Identity = 61/139 (43.88%), Postives = 75/139 (53.96%), Query Frame = 1
Query:   25 AEFPSLXXXXXXXXXXXXXQTLSLAEFT------AKPVSS---FTHQDPVVLPTGPRQRTAEEIESDRTRLGGGFRSYGDRPNRGSGGDEXXXXXXXXXXXXXE-LRRNDSFG-SRDSNRETAPSRADEIDNWAAAKKP 408
            ++FPSL             QT+SLAEF       AKP       T  + V LPTGPR+R+AEE+  DR++LGGGFRSYG     G  GDE             +  RR   F   R+ +R++ PSRADE DNWAAAKKP
Sbjct:   43 SDFPSLAAAATTKTKKKKGQTISLAEFATYGTAKAKPAPQTERLTQAELVALPTGPRERSAEEL--DRSKLGGGFRSYGG----GRYGDESSSSRWGSSRVSEDGERRGGGFNRDREPSRDSGPSRADEDDNWAAAKKP 175          
BLAST of FG532467 vs. TrEMBL
Match: D7MFM7_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_490636 PE=4 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.972e-16
Identity = 58/137 (42.34%), Postives = 73/137 (53.28%), Query Frame = 1
Query:   25 AEFPSLXXXXXXXXXXXXXQTLSLAEFT-------AKPVSSFTHQDPVVLPTGPRQRTAEEIESDRTRLGGGFRSYGDRPNRGSGGDEXXXXXXXXXXXXXE-LRRNDSFG-SRDSNRETAPSRADEIDNWAAAKKP 408
            ++FPSL             QT+SLAEF        A      T  + V LPTGPR+R+A+E+  DR++LGGGFRSYG     G  GDE             +  RR   F   R+ +R++ PSRADE DNWAAAKKP
Sbjct:   43 SDFPSLAAAATTKTKKKKAQTISLAEFATYGSAKAAAQTERLTQAELVSLPTGPRERSADEL--DRSKLGGGFRSYGG----GRYGDESSSSRWGSSRVSEDGERRGGGFNRDREPSRDSGPSRADEDDNWAAAKKP 173          
BLAST of FG532467 vs. TrEMBL
Match: B9H157_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_556597 PE=4 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.225e-14
Identity = 58/138 (42.03%), Postives = 78/138 (56.52%), Query Frame = 1
Query:   13 TKPL---AEFPSLXXXXXXXXXXXXXQTLSLAEFTAKPVSSFTHQ-DPVVLPTGPRQRTAEEIESDRTRLGGGFRSYGDRPNRGSGGDEXXXXXXXXXXXXXELRRNDSFGSRDSNRETAPSRADEIDNWAAAKKPAV 414
            T+PL   AEFPSL             +TL+LAE +  P +  +H+ D + LPT PR+R+AEE+  DR R+GGGF+SYG   N  +GG+E                 N    +R+S+RE APSRADEID+W+  KK  V
Sbjct:   38 TEPLGGTAEFPSLAAATKQPKKKKN-KTLTLAELSNYPSAKQSHEPDLLNLPTRPRERSAEEL--DRARIGGGFKSYG--LNYRNGGEESNSRWGGGGNG------NSRVSNRESSREFAPSRADEIDDWSKTKKSPV 164          
BLAST of FG532467 vs. TrEMBL
Match: B9HRA2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_649260 PE=4 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.599e-14
Identity = 58/140 (41.43%), Postives = 79/140 (56.43%), Query Frame = 1
Query:    1 NTVETKPL---AEFPSLXXXXXXXXXXXXX-QTLSLAEFTAKPVSSFTHQ-DPVVLPTGPRQRTAEEIESDRTRLGGGFRSYGDRPNRGSGGDEXXXXXXXXXXXXXELRRNDSFGSRDSNRETAPSRADEIDNWAAAKK 405
            +T+  +PL   AEFPSL              QTLSLAEF+   ++  +H+ D   LPT PR+R+AEE+  DR RLGGGF+SYG   +  +GG+E                 N    +R+S++E APSRADEID+W+  KK
Sbjct:   37 STLAAQPLGGVAEFPSLAAAAATKQPKKKKNQTLSLAEFSNYSLAKSSHEPDLFNLPTRPRERSAEEL--DRARLGGGFKSYG--LSYRNGGEESNSRWGGGGNG------NSRVSNRESSKEFAPSRADEIDDWSKTKK 166          
BLAST of FG532467 vs. TrEMBL
Match: B9SQJ2_RICCO (Translation initiation factor, putative OS=Ricinus communis GN=RCOM_0738700 PE=4 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.089e-14
Identity = 56/138 (40.58%), Postives = 70/138 (50.72%), Query Frame = 1
Query:   25 AEFPSLXXXXXXXXXXXXXQTLSLAEFTAKPVSS-----------FTHQDPVVLPTGPRQRTAEEIESDRTRLGGGFRSYGDRPNRGSGGDEXXXXXXXXXXXXXELRRNDSFGSRDSNRETAPSRADEIDNWAAAKK 405
            ++FPSL             QTLSLAEF     ++            TH+D + LPTGPRQR+AEE+  DR+RLGGGF+SYG   N  +G D                R       RDS+RE   SRADEID+W+  KK
Sbjct:   39 SDFPSLSVAATKQPKKKKNQTLSLAEFATYSSAAASQQPSQHSRGLTHEDLLNLPTGPRQRSAEEL--DRSRLGGGFKSYG--MNSRNGDDAGNSRWGGGGNSRVSSR------DRDSSRELVLSRADEIDDWSKTKK 166          
BLAST of FG532467 vs. TrEMBL
Match: Q6ZI51_ORYSJ (Os02g0595800 protein OS=Oryza sativa subsp. japonica GN=OJ1126_D09.32 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.076e-10
Identity = 54/146 (36.99%), Postives = 71/146 (48.63%), Query Frame = 1
Query:   19 PLAEFPSLXXXXXXXXXXXXXQ----TLSLAEFTA-------KPVSS------FTHQDPVVLPTGPRQRTAEEIESDRTRLGGGFRSYGDRPNRGSGGDEXXXXXXXXXXXXXELRRNDSFGSRDSNRETAPSRADEIDNWAAAKK 405
            P A FPSL             +    TLSL+EFT        +P ++       T Q+ ++LPTGPR+R+ EE+  DR+RLGGGFRSYG    RG   D+               RR      RD++ +  PSRADE  NW+  KK
Sbjct:   34 PAAGFPSLREAAAGAAAGKSKKKKGTTLSLSEFTTYGAAAGRRPAAAAAEPKGLTPQEMMMLPTGPRERSTEEL--DRSRLGGGFRSYGSGERRGGFDDDG--------------RRGGP--GRDADLD-MPSRADESGNWSLNKK 160          
BLAST of FG532467 vs. TrEMBL
Match: B8LKF3_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.186e-9
Identity = 47/136 (34.56%), Postives = 62/136 (45.59%), Query Frame = 1
Query:   82 QTLSLAEF------------------TAKPVSSFTHQDPVVLPTGPRQRTAEEIESDRT-RLGGGFRSYGDRPNRGSGGDEXXXXXXXXXXXXXELRRNDSFGSRDSNRETA-------PSRADEIDNWAAAKKPA 411
            QTLS++EF                  +A      T ++ ++LPTGPR+R+A+E +   + RLGGGFR YG R   G GG                  R    G  D +R+         PSRADE DNWA+ KK A
Sbjct:   65 QTLSISEFATGIYVGPGGRTRGAGAASASVSKGLTTEELMMLPTGPRERSADEPDYGGSGRLGGGFRDYGKRVGGGGGGGGGGGGFRDEGDGQWGSNRRPFGGGFDDDRKPQTRVSDFEPSRADEADNWASTKKVA 200          
BLAST of FG532467 vs. TrEMBL
Match: C5YAR4_SORBI (Putative uncharacterized protein Sb06g020170 OS=Sorghum bicolor GN=Sb06g020170 PE=4 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 5.886e-9
Identity = 48/119 (40.34%), Postives = 59/119 (49.58%), Query Frame = 1
Query:   85 TLSLAEFT----------AKPVS--SFTHQDPVVLPTGPRQRTAEEIESDRTRLGGGFRSYGDRPNRGSGGDEXXXXXXXXXXXXXELRRNDSFGSRDSNRETAPSRADEIDNWAAAKK 405
            TLSL+EFT          A PV     TH++ ++LPTGPR+R+AEE++  R     GFRSYG     G GG               E RR    G   S+    PSRADE D+W A KK
Sbjct:   68 TLSLSEFTTYGAAAAQRRAAPVEPRGLTHEEMMMLPTGPRERSAEELDRSR-----GFRSYGG----GGGGFGGPGGGERRGGFDDEGRR----GPGRSSDLDMPSRADEADDWGATKK 173          
BLAST of FG532467 vs. TAIR peptide
Match: AT4G38710.2 (| Symbols: | glycine-rich protein | chr4:18078141-18080002 REVERSE LENGTH=465)

HSP 1 Score: 89.7373 bits (221), Expect = 7.737e-19
Identity = 61/139 (43.88%), Postives = 75/139 (53.96%), Query Frame = 1
Query:   25 AEFPSLXXXXXXXXXXXXXQTLSLAEFT------AKPVSS---FTHQDPVVLPTGPRQRTAEEIESDRTRLGGGFRSYGDRPNRGSGGDEXXXXXXXXXXXXXE-LRRNDSFG-SRDSNRETAPSRADEIDNWAAAKKP 408
            ++FPSL             QT+SLAEF       AKP       T  + V LPTGPR+R+AEE+  DR++LGGGFRSYG     G  GDE             +  RR   F   R+ +R++ PSRADE DNWAAAKKP
Sbjct:   43 SDFPSLAAAATTKTKKKKGQTISLAEFATYGTAKAKPAPQTERLTQAELVALPTGPRERSAEEL--DRSKLGGGFRSYGG----GRYGDESSSSRWGSSRVSEDGERRGGGFNRDREPSRDSGPSRADEDDNWAAAKKP 175          
BLAST of FG532467 vs. TAIR peptide
Match: AT4G38710.1 (| Symbols: | glycine-rich protein | chr4:18078141-18080002 REVERSE LENGTH=452)

HSP 1 Score: 89.7373 bits (221), Expect = 7.737e-19
Identity = 61/139 (43.88%), Postives = 75/139 (53.96%), Query Frame = 1
Query:   25 AEFPSLXXXXXXXXXXXXXQTLSLAEFT------AKPVSS---FTHQDPVVLPTGPRQRTAEEIESDRTRLGGGFRSYGDRPNRGSGGDEXXXXXXXXXXXXXE-LRRNDSFG-SRDSNRETAPSRADEIDNWAAAKKP 408
            ++FPSL             QT+SLAEF       AKP       T  + V LPTGPR+R+AEE+  DR++LGGGFRSYG     G  GDE             +  RR   F   R+ +R++ PSRADE DNWAAAKKP
Sbjct:   43 SDFPSLAAAATTKTKKKKGQTISLAEFATYGTAKAKPAPQTERLTQAELVALPTGPRERSAEEL--DRSKLGGGFRSYGG----GRYGDESSSSRWGSSRVSEDGERRGGGFNRDREPSRDSGPSRADEDDNWAAAKKP 175          
BLAST of FG532467 vs. TAIR peptide
Match: AT3G26400.1 (| Symbols: EIF4B1 | eukaryotic translation initiation factor 4B1 | chr3:9666616-9669081 FORWARD LENGTH=532)

HSP 1 Score: 63.5438 bits (153), Expect = 5.938e-11
Identity = 45/123 (36.59%), Postives = 56/123 (45.53%), Query Frame = 1
Query:   88 LSLAEFTAKPVSS--------FTHQDPVVLPTGPRQRTAEEIESDRTRLGGGFRSYGDRPNRGSGGDEXXXXXXXXXXXXXELRRNDSFGSRDSNRET--------APSRADEIDNWAAAKKP 408
            +SL+EFT    ++         T Q+ + LPTGPRQR+ EE++    RLGGGF SYG R     G D                RR    G  D  R           PSRADE+D+W   KKP
Sbjct:   60 MSLSEFTTGAYTAPGGRNSVGLTQQEILQLPTGPRQRSEEEMQPG--RLGGGFSSYGGRSGGRIGRDRDDSDGSWSGGGGGGGRRPYGGGFDDDRRGNQSRVSDFPQPSRADEVDDWGKEKKP 180          
BLAST of FG532467 vs. TAIR peptide
Match: AT1G13020.1 (| Symbols: EIF4B2 | eukaryotic initiation factor 4B2 | chr1:4440927-4443520 REVERSE LENGTH=549)

HSP 1 Score: 50.447 bits (119), Expect = 5.202e-7
Identity = 35/110 (31.82%), Postives = 49/110 (44.55%), Query Frame = 1
Query:  103 FTAKPVSSFTHQDPVVLPTGPRQRTAEEIESDRTRLGGGFRSYGDRPNRGSGGDEXXXXXXXXXXXXXELRRNDSFGSRDSNRETA---------PSRADEIDNWAAAKK 405
            +TA   +  T +  + LPTGPRQR+ +E++    RLGGGF SYG   + G  G                     S+G  D ++  +          SRADE D+W   KK
Sbjct:   64 YTAPSSAGLTREQMLQLPTGPRQRSEDEMQPG--RLGGGFSSYGGGRSSGPPGRMSRDREDSDGSWGGGGGGRRSYGGFDDDQRGSNSRVSDFPQVSRADEDDDWGKGKK 171          
The following BLAST results are available for this feature:
BLAST of FG532467 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
D7U594_VITVI6.704e-2147.48Whole genome shotgun sequence of line PN40024, sca... [more]
A5BQN4_VITVI3.327e-2045.45Putative uncharacterized protein OS=Vitis vinifera... [more]
Q9SZP8_ARATH1.002e-1643.88Putative uncharacterized protein AT4g38710 OS=Arab... [more]
D7MFM7_ARALY4.972e-1642.34Putative uncharacterized protein OS=Arabidopsis ly... [more]
B9H157_POPTR1.225e-1442.03Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9HRA2_POPTR1.599e-1441.43Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9SQJ2_RICCO2.089e-1440.58Translation initiation factor, putative OS=Ricinus... [more]
Q6ZI51_ORYSJ4.076e-1036.99Os02g0595800 protein OS=Oryza sativa subsp. japoni... [more]
B8LKF3_PICSI1.186e-934.56Putative uncharacterized protein OS=Picea sitchens... [more]
C5YAR4_SORBI5.886e-940.34Putative uncharacterized protein Sb06g020170 OS=So... [more]
back to top
BLAST of FG532467 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT4G38710.27.737e-1943.88| Symbols: | glycine-rich protein | chr4:18078141... [more]
AT4G38710.17.737e-1943.88| Symbols: | glycine-rich protein | chr4:18078141... [more]
AT3G26400.15.938e-1136.59| Symbols: EIF4B1 | eukaryotic translation initiat... [more]
AT1G13020.15.202e-731.82| Symbols: EIF4B2 | eukaryotic initiation factor 4... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010433Plant specific eukaryotic initiation factor 4BPFAMPF06273eIF-4Bcoord: 9..149
score: 1.4
NoneNo IPR availableSEGsegsegcoord: 15..27
score: NAcoord: 90..102
score: NAcoord: 139..156
score
NoneNo IPR availableSEGsegsegcoord: 1..28
score
NoneNo IPR availableSEGsegsegcoord: 40..52
score
NoneNo IPR availableSEGsegsegcoord: 3..17
score: NAcoord: 55..74
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG532467 ID=FG532467; Name=FG532467; organism=Pisum sativum; type=EST; length=470bp
AACACCGTTGAAACCAAACCGCTCGCTGAATTTCCTTCTCTCGCCGTCGC
CGCCGCAACCAAGCCCAAAAAGAAGAAAGCCCAAACCCTAAGTTTGGCTG
AGTTTACCGCCAAACCGGTTTCTTCTTTTACACATCAAGATCCTGTGGTT
CTTCCTACCGGTCCTCGTCAAAGGACCGCCGAGGAGATTGAAAGTGATAG
GACTCGTCTAGGAGGAGGGTTTAGATCTTATGGGGACCGTCCTAATCGGG
GTTCTGGTGGAGATGAGAGTTCTGTTTCGAGATGGGGTTCCTCTAGGGTT
TCTAGTGAATTGAGGCGGAATGATTCGTTTGGTTCTAGGGATTCGAATCG
GGAGACTGCACCGTCTAGGGCGGATGAGATTGATAATTGGGCGGCTGCAA
AGAAGCCTGCGGTTGGGAATGGATTTGAGAGAAGGGATAGGGAAAGAGGG
GAGAGAGGTGGGTTTTTTTG
back to top
Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR010433EIF-4B_pln