FG536078

EST Overview
NameFG536078
Unique NameFG536078
TypeEST
OrganismPisum sativum (pea)
Sequence length439
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of FG536078 vs. TrEMBL
Match: C6TEX4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.271e-21
Identity = 51/53 (96.23%), Postives = 51/53 (96.23%), Query Frame = 1
Query:    4 TVLKTRFSDDGKAAFQCQRAWRPNSLITLSAEYDSTKIFGSPAKFGLALALKP 162
            TVLKTRFSDDGKAAFQCQRAWRPNSLITLSAEYDSTKIFGS  KFGLALALKP
Sbjct:  225 TVLKTRFSDDGKAAFQCQRAWRPNSLITLSAEYDSTKIFGSSTKFGLALALKP 277          
BLAST of FG536078 vs. TrEMBL
Match: B7FK34_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.060e-21
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 1
Query:    4 TVLKTRFSDDGKAAFQCQRAWRPNSLITLSAEYDSTKIFGSPAKFGLALALKP 162
            TVLKTRFSDDGKAAFQCQRAWRPNSLITLSAEYDS KI GSPAKFGLAL+LKP
Sbjct:  227 TVLKTRFSDDGKAAFQCQRAWRPNSLITLSAEYDSKKIIGSPAKFGLALSLKP 279          
BLAST of FG536078 vs. TrEMBL
Match: C6T7U9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.511e-20
Identity = 49/53 (92.45%), Postives = 50/53 (94.34%), Query Frame = 1
Query:    4 TVLKTRFSDDGKAAFQCQRAWRPNSLITLSAEYDSTKIFGSPAKFGLALALKP 162
            TV+KTRFSDDGKAA QCQRAWRPNSLITLSAEYDSTKIFGS  KFGLALALKP
Sbjct:  225 TVVKTRFSDDGKAALQCQRAWRPNSLITLSAEYDSTKIFGSSTKFGLALALKP 277          
BLAST of FG536078 vs. TrEMBL
Match: Q6W2J1_LOTJA (VDAC3.1 OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.126e-19
Identity = 48/54 (88.89%), Postives = 49/54 (90.74%), Query Frame = 1
Query:    1 NTVLKTRFSDDGKAAFQCQRAWRPNSLITLSAEYDSTKIFGSPAKFGLALALKP 162
            NTVLKTRFSDDGKAAF CQRAWRP SLITLSAEYDSTKIFGS  K GLALAL+P
Sbjct:  224 NTVLKTRFSDDGKAAFLCQRAWRPKSLITLSAEYDSTKIFGSSTKLGLALALQP 277          
BLAST of FG536078 vs. TrEMBL
Match: B9IM03_POPTR (Porin/voltage-dependent anion-selective channel protein OS=Populus trichocarpa GN=POPTRDRAFT_825899 PE=4 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.130e-12
Identity = 37/53 (69.81%), Postives = 40/53 (75.47%), Query Frame = 1
Query:    4 TVLKTRFSDDGKAAFQCQRAWRPNSLITLSAEYDSTKIFGSPAKFGLALALKP 162
            TV+KTRFSD+GKAA  CQ  WRP SLIT SAEYDS     +  KFGLALALKP
Sbjct:  223 TVVKTRFSDNGKAAMLCQHEWRPKSLITFSAEYDSKATHAAAPKFGLALALKP 275          
BLAST of FG536078 vs. TrEMBL
Match: A9PJT1_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.130e-12
Identity = 37/53 (69.81%), Postives = 40/53 (75.47%), Query Frame = 1
Query:    4 TVLKTRFSDDGKAAFQCQRAWRPNSLITLSAEYDSTKIFGSPAKFGLALALKP 162
            TV+KTRFSD+GKAA  CQ  WRP SLIT SAEYDS     +  KFGLALALKP
Sbjct:  223 TVVKTRFSDNGKAAMLCQHEWRPKSLITFSAEYDSKATHAAAPKFGLALALKP 275          
BLAST of FG536078 vs. TrEMBL
Match: D7MNA4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_495848 PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.097e-11
Identity = 36/53 (67.92%), Postives = 41/53 (77.36%), Query Frame = 1
Query:    4 TVLKTRFSDDGKAAFQCQRAWRPNSLITLSAEYDSTKIFGSPAKFGLALALKP 162
            TV+KTRFS++GKA    QR WRP SLITLSAEYDS  +  SP + GLALALKP
Sbjct:  223 TVVKTRFSNNGKAGMVVQREWRPKSLITLSAEYDSKAVTSSP-RLGLALALKP 274          
BLAST of FG536078 vs. TrEMBL
Match: B9N2Z1_POPTR (Porin/voltage-dependent anion-selective channel protein OS=Populus trichocarpa GN=POPTRDRAFT_580465 PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.057e-10
Identity = 34/53 (64.15%), Postives = 39/53 (73.58%), Query Frame = 1
Query:    4 TVLKTRFSDDGKAAFQCQRAWRPNSLITLSAEYDSTKIFGSPAKFGLALALKP 162
            TV+KTRFSD+GKAA   Q  WRP SLIT SAEYDS     +  K+G+ALALKP
Sbjct:  223 TVVKTRFSDNGKAAMLYQHEWRPKSLITFSAEYDSKATHAANPKYGIALALKP 275          
BLAST of FG536078 vs. TrEMBL
Match: B6TAR9_MAIZE (Outer mitochondrial membrane protein porin OS=Zea mays PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.018e-10
Identity = 30/54 (55.56%), Postives = 41/54 (75.93%), Query Frame = 1
Query:    1 NTVLKTRFSDDGKAAFQCQRAWRPNSLITLSAEYDSTKIFGSPAKFGLALALKP 162
            +T+LKTRFS+ GK    CQ  WRP SL+TLSAEYD  K+  +P++ G+A++LKP
Sbjct:  224 STLLKTRFSNSGKVGLLCQHEWRPKSLVTLSAEYD-PKVVSAPSRIGMAISLKP 276          
BLAST of FG536078 vs. TrEMBL
Match: Q1KSB8_SORBI (Putative voltage-dependent ion channel OS=Sorghum bicolor PE=4 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.248e-10
Identity = 30/54 (55.56%), Postives = 41/54 (75.93%), Query Frame = 1
Query:    1 NTVLKTRFSDDGKAAFQCQRAWRPNSLITLSAEYDSTKIFGSPAKFGLALALKP 162
            +T+LKTRFS+ GK    CQ  WRP SL+TLSAEYD  K+  +P++ G+A++LKP
Sbjct:  272 STLLKTRFSNSGKVGLLCQHEWRPKSLVTLSAEYD-PKVVSAPSRIGVAISLKP 324          
BLAST of FG536078 vs. SwissProt
Match: VDAC1_ORYSJ (Mitochondrial outer membrane protein porin OS=Oryza sativa subsp. japonica GN=VDAC1 PE=1 SV=3)

HSP 1 Score: 53.1434 bits (126), Expect = 5.728e-7
Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 1
Query:    4 TVLKTRFSDDGKAAFQCQRAWRPNSLITLSAEYDSTKIFGSPAKFGLALALKP 162
            TV+K RF++ GKA+   Q  WRP S+ T+SAE D TK     +K G+A+ALKP
Sbjct:  223 TVVKARFNNSGKASALLQHEWRPKSVWTISAEVD-TKAIDKSSKVGIAVALKP 274          
BLAST of FG536078 vs. SwissProt
Match: VDAC_PEA (Outer plastidial membrane protein porin OS=Pisum sativum GN=POR1 PE=1 SV=2)

HSP 1 Score: 52.7582 bits (125), Expect = 7.481e-7
Identity = 28/53 (52.83%), Postives = 35/53 (66.04%), Query Frame = 1
Query:    4 TVLKTRFSDDGKAAFQCQRAWRPNSLITLSAEYDSTKIFGSPAKFGLALALKP 162
            T +K R ++ GKA+   Q  WRP SLIT+S+E D TK     AK GL+LALKP
Sbjct:  225 TTVKGRVTNSGKASALIQHEWRPKSLITISSEVD-TKAIEKSAKIGLSLALKP 276          
BLAST of FG536078 vs. SwissProt
Match: VDAC1_SOLTU (Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 52.373 bits (124), Expect = 9.771e-7
Identity = 29/53 (54.72%), Postives = 34/53 (64.15%), Query Frame = 1
Query:    4 TVLKTRFSDDGKAAFQCQRAWRPNSLITLSAEYDSTKIFGSPAKFGLALALKP 162
            T +K R ++ GKA+   Q  WRP SL T+S E D TK     AKFGLALALKP
Sbjct:  225 TSVKARINNFGKASALLQHEWRPKSLFTVSGEVD-TKSVDKGAKFGLALALKP 276          
BLAST of FG536078 vs. TAIR peptide
Match: AT5G57490.1 (| Symbols: VDAC4, ATVDAC4 | voltage dependent anion channel 4 | chr5:23283895-23285335 REVERSE LENGTH=274)

HSP 1 Score: 66.6254 bits (161), Expect = 6.047e-12
Identity = 35/53 (66.04%), Postives = 38/53 (71.70%), Query Frame = 1
Query:    4 TVLKTRFSDDGKAAFQCQRAWRPNSLITLSAEYDSTKIFGSPAKFGLALALKP 162
            TV+KTRFS+ GKA    QR WRP S IT SAEYDS  +  SP K GLALALKP
Sbjct:  223 TVVKTRFSNSGKAGMVVQREWRPKSHITFSAEYDSKAVTSSP-KLGLALALKP 274          
The following BLAST results are available for this feature:
BLAST of FG536078 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TEX4_SOYBN2.271e-2196.23Putative uncharacterized protein OS=Glycine max PE... [more]
B7FK34_MEDTR5.060e-2194.34Putative uncharacterized protein OS=Medicago trunc... [more]
C6T7U9_SOYBN2.511e-2092.45Putative uncharacterized protein OS=Glycine max PE... [more]
Q6W2J1_LOTJA2.126e-1988.89VDAC3.1 OS=Lotus japonicus PE=2 SV=1[more]
B9IM03_POPTR1.130e-1269.81Porin/voltage-dependent anion-selective channel pr... [more]
A9PJT1_9ROSI1.130e-1269.81Putative uncharacterized protein OS=Populus tricho... [more]
D7MNA4_ARALY8.097e-1167.92Putative uncharacterized protein OS=Arabidopsis ly... [more]
B9N2Z1_POPTR1.057e-1064.15Porin/voltage-dependent anion-selective channel pr... [more]
B6TAR9_MAIZE4.018e-1055.56Outer mitochondrial membrane protein porin OS=Zea ... [more]
Q1KSB8_SORBI5.248e-1055.56Putative voltage-dependent ion channel OS=Sorghum ... [more]
back to top
BLAST of FG536078 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
VDAC1_ORYSJ5.728e-750.94Mitochondrial outer membrane protein porin OS=Oryz... [more]
VDAC_PEA7.481e-752.83Outer plastidial membrane protein porin OS=Pisum s... [more]
VDAC1_SOLTU9.771e-754.72Mitochondrial outer membrane protein porin of 34 k... [more]
back to top
BLAST of FG536078 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G57490.16.047e-1266.04| Symbols: VDAC4, ATVDAC4 | voltage dependent anio... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11743VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNELcoord: 2..54
score: 5.9
NoneNo IPR availablePANTHERPTHR11743:SF14VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1, 2coord: 2..54
score: 5.9
NoneNo IPR availableSEGsegsegcoord: 11..26
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG536078 ID=FG536078; Name=FG536078; organism=Pisum sativum; type=EST; length=439bp
AATACAGTTTTGAAGACTCGATTCAGTGATGATGGCAAAGCCGCCTTCCA
GTGCCAACGAGCGTGGAGGCCAAATTCACTCATAACCTTGTCTGCTGAGT
ATGACTCCACAAAGATCTTTGGTTCACCTGCCAAATTTGGTCTTGCTCTC
GCTCTCAAGCCTTAAACCGGTTTGCCAATTGAATCTTATTCAACAAATTA
TTAACTTCACAATTCTATCATTTTACATTGTTGCCATTATTACCCCTGGT
GGGATGTTCTAAGCCCCATCATATATCATAACGTAAACCAAAGGAATCAG
TATCATTTGTGCATTTTTCTAAAGCAGCAGGGGGGAAAGAGATACTGTTT
TGAAAACTTACATAATGACTAATTTTGTGGCCGATTTATCGCAGTGCCAT
TCAATATCTGGCCTATGATTTTGGGGCCAAATTGTATTC
back to top