FG536935

EST Overview
NameFG536935
Unique NameFG536935
TypeEST
OrganismPisum sativum (pea)
Sequence length556
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v2Pisum sativum unigene v2EST
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Pisum sativum unigene v22011-03-01
Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins2011-04-21
InterProScan analysis for Pisum sativum unigene v22011-04-27
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
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BLAST of FG536935 vs. Medicago proteins
Match: IMGA|Medtr5g042000.1 (Cell division cycle and apoptosis regulator protein 1 (AHRD V1 *-*- Q641G3); contains Interpro domain(s) IPR011992 EF-Hand type chr05_pseudomolecule_IMGAG_V3.5 18038943-18048514 E EGN_Mt100125 20100825)

HSP 1 Score: 60.8474 bits (146), Expect = 4.742e-10
Identity = 40/83 (48.19%), Postives = 45/83 (54.22%), Query Frame = 1 
Query:   73 KKLMPTTSEKQEAS---GDSNKNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDKQNASEKDTPIVKGKLKVGDKSKDEKVT 312
            KKL  +TSEKQE +   GDSNKNE+                            IDK+  SEKDT IV GKLKVG+KSKDEKVT
Sbjct: 1136 KKLKVSTSEKQEGARGAGDSNKNEMKSDNNDKKDGKGTGEKSGSK--------IDKKKTSEKDTQIVTGKLKVGEKSKDEKVT 1210
The following BLAST results are available for this feature:
BLAST of FG536935 vs. Medicago proteins
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins)
Total hits: 1
Match NameE-valueIdentityDescription
IMGA|Medtr5g042000.14.742e-1048.19Cell division cycle and apoptosis regulator protei... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v2
Date Performed: 2011-04-27
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 25..52
score: NAcoord: 83..101
score
NoneNo IPR availableSEGsegsegcoord: 25..42
score
NoneNo IPR availableSEGsegsegcoord: 49..79
score
NoneNo IPR availableSEGsegsegcoord: 8..35
score: NAcoord: 62..89
score

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 25..52
score: NAcoord: 83..101
score
NoneNo IPR availableSEGsegsegcoord: 25..42
score
NoneNo IPR availableSEGsegsegcoord: 49..79
score
NoneNo IPR availableSEGsegsegcoord: 8..35
score: NAcoord: 62..89
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v2
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG536935 ID=FG536935; Name=FG536935; organism=Pisum sativum; type=EST; length=556bp
CAAACAAGAAGGCCACTGATGCAGATACAAAAACTGTGCCGGTGACAAAG
AAAATTGTCAAGGTAGTTCCTAAAAAAGTTAATGCCAACAACCTCTGAAA
AGCAAGAAGCTTCAGGCGATTCCAATAAAAATGAAGTGAAGTCTGACAAA
GATGGCAATAAGGATGGAAAAGGAACTGGAGAAAAAAGTGGATCCAAAAC
TGGAGAAAAAAGTGGATCCAAGATAGATAAACAGAATGCCTCTGAGAAAG
ATACTCCAATTGTCAAGGGGAAACTGAAAGTTGGGGATAAATCAAAAGAT
GAGAAAGTAACAAAAGAGAAAGATGAGCCTAAAAGCAAATCGGGTAAAGA
AGGGAAAGAGAAGAAGAAATAATTATTATCATGTTTTTTTTAATTATTAA
ACTTTTCATTTTCTTCTAATTTTTTGTTTGGCATATTTTTCTATATTGAG
AAGGAAGTGTAAGCTGAAAAAATTGTTTATAATTTTTTTTTAAATTTGTG
TAATATCTTTTCGAATTTGGTGTTCAAGATCTTTTTAATTAAGCATTGAA
TAATCT
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