FG537132

EST Overview
NameFG537132
Unique NameFG537132
TypeEST
OrganismPisum sativum (pea)
Sequence length408
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v2Pisum sativum unigene v2EST
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
[Close]
BLAST of FG537132 vs. Soybean peptides
Match: Glyma02g41900.1|PACid:16249847 ()

HSP 1 Score: 56.9954 bits (136), Expect = 5.846e-9
Identity = 27/52 (51.92%), Postives = 34/52 (65.38%), Query Frame = 2 
Query:    2 RHLPRPVYKAAALMRTMXXXXXXXXXXXXXXXXPGSVTTKPLRVKRIVKEVE 157
            RHLPRP++KA+ALMR M                PGS+TT+PLR +RI+KEVE
Sbjct:  401 RHLPRPIFKASALMRVMADAKRRKEEKRKAHSAPGSITTQPLRRRRIIKEVE 452
[Close]
BLAST of FG537132 vs. Soybean peptides
Match: Glyma14g07070.1|PACid:16294663 ()

HSP 1 Score: 53.9138 bits (128), Expect = 4.949e-8
Identity = 26/52 (50.00%), Postives = 33/52 (63.46%), Query Frame = 2 
Query:    2 RHLPRPVYKAAALMRTMXXXXXXXXXXXXXXXXPGSVTTKPLRVKRIVKEVE 157
            RHLPRP++KA+ALM  M                PGS+TT+PLR +RI+KEVE
Sbjct:  402 RHLPRPIFKASALMCVMADAKRRKEEKRKAHSAPGSITTQPLRRRRIIKEVE 453
[Close]
BLAST of FG537132 vs. Medicago proteins
Match: IMGA|Medtr1g022960.3 (DDB1- and CUL4-associated factor 13 (AHRD V1 ***- Q803X4); contains Interpro domain(s) IPR017986 WD40 repeat, region chr01_pseudomolecule_IMGAG_V3.5 6982466-6979647 E EGN_Mt100125 20100825)

HSP 1 Score: 55.8398 bits (133), Expect = 7.779e-9
Identity = 26/52 (50.00%), Postives = 34/52 (65.38%), Query Frame = 2 
Query:    2 RHLPRPVYKAAALMRTMXXXXXXXXXXXXXXXXPGSVTTKPLRVKRIVKEVE 157
            RHLPRP+YKA++L+R +                PGSVTTKPLR +RI++EVE
Sbjct:  218 RHLPRPIYKASSLLRVIADAKKKKEERRKAHSAPGSVTTKPLRKRRIIREVE 269
[Close]
BLAST of FG537132 vs. Medicago proteins
Match: IMGA|Medtr1g022960.2 (DDB1- and CUL4-associated factor 13 (AHRD V1 ***- Q5ZLK1); contains Interpro domain(s) IPR020472 G-protein beta WD-40 repeat, region chr01_pseudomolecule_IMGAG_V3.5 6985587-6979647 E EGN_Mt100125 20100825)

HSP 1 Score: 55.8398 bits (133), Expect = 7.779e-9
Identity = 26/52 (50.00%), Postives = 34/52 (65.38%), Query Frame = 2 
Query:    2 RHLPRPVYKAAALMRTMXXXXXXXXXXXXXXXXPGSVTTKPLRVKRIVKEVE 157
            RHLPRP+YKA++L+R +                PGSVTTKPLR +RI++EVE
Sbjct:  401 RHLPRPIYKASSLLRVIADAKKKKEERRKAHSAPGSVTTKPLRKRRIIREVE 452
[Close]
BLAST of FG537132 vs. Medicago proteins
Match: IMGA|Medtr1g022960.1 (DDB1- and CUL4-associated factor 13 (AHRD V1 ***- Q5ZLK1); contains Interpro domain(s) IPR020472 G-protein beta WD-40 repeat, region chr01_pseudomolecule_IMGAG_V3.5 6985587-6979647 E EGN_Mt100125 20100825)

HSP 1 Score: 55.8398 bits (133), Expect = 7.779e-9
Identity = 26/52 (50.00%), Postives = 34/52 (65.38%), Query Frame = 2 
Query:    2 RHLPRPVYKAAALMRTMXXXXXXXXXXXXXXXXPGSVTTKPLRVKRIVKEVE 157
            RHLPRP+YKA++L+R +                PGSVTTKPLR +RI++EVE
Sbjct:  405 RHLPRPIYKASSLLRVIADAKKKKEERRKAHSAPGSVTTKPLRKRRIIREVE 456
[Close]
BLAST of FG537132 vs. Medicago proteins
Match: IMGA|AC235668_10.1 (DDB1- and CUL4-associated factor 13 (AHRD V1 ***- Q5ZLK1); contains Interpro domain(s) IPR020472 G-protein beta WD-40 repeat, region AC235668.7 42664-36635 E EGN_Mt100125 20100825)

HSP 1 Score: 55.8398 bits (133), Expect = 7.779e-9
Identity = 26/52 (50.00%), Postives = 34/52 (65.38%), Query Frame = 2 
Query:    2 RHLPRPVYKAAALMRTMXXXXXXXXXXXXXXXXPGSVTTKPLRVKRIVKEVE 157
            RHLPRP+YKA++L+R +                PGSVTTKPLR +RI++EVE
Sbjct:  401 RHLPRPIYKASSLLRVIADAKKKKEERRKAHSAPGSVTTKPLRKRRIIREVE 452
The following BLAST results are available for this feature:
BLAST of FG537132 vs. Soybean peptides
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides)
Total hits: 2
Match NameE-valueIdentityDescription
Glyma02g41900.1|PACid:162498475.846e-951.92[more]
Glyma14g07070.1|PACid:162946634.949e-850.00[more]
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BLAST of FG537132 vs. Medicago proteins
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins)
Total hits: 4
Match NameE-valueIdentityDescription
IMGA|Medtr1g022960.37.779e-950.00DDB1- and CUL4-associated factor 13 (AHRD V1 ***- ... [more]
IMGA|Medtr1g022960.27.779e-950.00DDB1- and CUL4-associated factor 13 (AHRD V1 ***- ... [more]
IMGA|Medtr1g022960.17.779e-950.00DDB1- and CUL4-associated factor 13 (AHRD V1 ***- ... [more]
IMGA|AC235668_10.17.779e-950.00DDB1- and CUL4-associated factor 13 (AHRD V1 ***- ... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v2
Date Performed: 2011-04-27
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007287Sof1-like proteinPFAMPF04158Sof1coord: 1..48
score: 5.2
NoneNo IPR availablePANTHERPTHR22851U3 SMALL NUCLEOLAR RNA (U3 SNORNA) ASSOCIATED PROTEINcoord: 1..52
score: 3.6
NoneNo IPR availableSEGsegsegcoord: 18..33
score

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007287Sof1-like proteinPFAMPF04158Sof1coord: 1..48
score: 5.2
NoneNo IPR availablePANTHERPTHR22851U3 SMALL NUCLEOLAR RNA (U3 SNORNA) ASSOCIATED PROTEINcoord: 1..52
score: 3.6
NoneNo IPR availableSEGsegsegcoord: 18..33
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v2
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG537132 ID=FG537132; Name=FG537132; organism=Pisum sativum; type=EST; length=408bp
TAGACACTTACCAAGACCAGTATACAAAGCTGCTGCATTGATGCGCACTA
TGGCGATTGCTAAGAAAAGAAAGCATGACAGGAGGAAAGCTCACAGTGCT
CCGGGGAGTGTTACAACAAAGCCGTTGCGCGTTAAAAGAATTGTCAAAGA
AGTTGAATGAGATTTTTGTGAGCCAATGCATGCTGAAAAATGCAATAGAT
ATTTATGAAATGGCAGGAGTTTGTATACTGATTTGTTAGGAAGATAGATG
GATATGCAATAGTTTTGTGATGCAAGAAATTTTGGTGTATTATTATTGAG
TTTAGCGTACTTGATATTTTTCAGTTCAAATTAGTAAAAATGTGATGAAA
TATGAGACTATTGGAGCTCTAACAAAATCTTCAATTCAATCAAAAGAAAA
TTGAAATG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR007287Sof1