FG537217

EST Overview


Name	FG537217
Unique Name	FG537217
Type	EST
Organism	Pisum sativum (pea)
Sequence length	338

Libraries


Library Name	Type
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTs	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v2	Pisum sativum unigene v2	EST
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Pisum sativum unigene v2	2011-03-01
Homology Analysis: Pisum sativum unigene v2 vs Lotus proteins	2011-04-21
Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides	2011-04-21
InterProScan analysis for Pisum sativum unigene v2	2011-04-27
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of FG537217 vs. Lotus protein
Match: chr2.CM0081.910.r2.a (+ phase: 0 )

HSP 1 Score: 58.151 bits (139), Expect = 8.335e-10
Identity = 25/41 (60.98%), Postives = 34/41 (82.93%), Query Frame = 1

Query:    7 MKEFPDELSLVLLYSISATIISTFVALLSVPNASAWKIGLN 129
            + EFPDEL++V  Y+++ATIIS  V LL+ PNA+AWKIGL+
Sbjct:  213 LNEFPDELTIVFFYNVTATIISVTVGLLAAPNATAWKIGLD 253

[Close]

BLAST of FG537217 vs. Soybean peptides
Match: Glyma19g01450.1|PACid:16311556 ()

HSP 1 Score: 56.9954 bits (136), Expect = 4.362e-9
Identity = 25/41 (60.98%), Postives = 33/41 (80.49%), Query Frame = 1

Query:    7 MKEFPDELSLVLLYSISATIISTFVALLSVPNASAWKIGLN 129
            +K FPDEL+ V  Y+++ATI+ST V   +VPNASAWKIGL+
Sbjct:  213 LKVFPDELTTVFFYNVTATILSTTVGFFAVPNASAWKIGLD 253

[Close]

BLAST of FG537217 vs. Soybean peptides
Match: Glyma19g01430.1|PACid:16311554 ()

HSP 1 Score: 53.5286 bits (127), Expect = 4.823e-8
Identity = 21/37 (56.76%), Postives = 33/37 (89.19%), Query Frame = 1

Query:    7 MKEFPDELSLVLLYSISATIISTFVALLSVPNASAWK 117
            +K FPDE+++VL Y++++T++ST VAL +VPNA+AWK
Sbjct:  212 LKVFPDEVTIVLFYNVTSTVMSTLVALFAVPNANAWK 248

[Close]

BLAST of FG537217 vs. Soybean peptides
Match: Glyma19g01460.4|PACid:16311560 ()

HSP 1 Score: 50.0618 bits (118), Expect = 5.332e-7
Identity = 22/40 (55.00%), Postives = 30/40 (75.00%), Query Frame = 1

Query:    1 EHMKEFPDELSLVLLYSISATIISTFVALLSVPNASAWKI 120
            E +KEFPDELS+V  Y++ A I+++ V LL   N+SAWKI
Sbjct:  149 EILKEFPDELSMVFFYNLCAAIVASIVGLLGEKNSSAWKI 188

[Close]

BLAST of FG537217 vs. Soybean peptides
Match: Glyma19g01460.3|PACid:16311559 ()

HSP 1 Score: 50.0618 bits (118), Expect = 5.332e-7
Identity = 22/40 (55.00%), Postives = 30/40 (75.00%), Query Frame = 1

Query:    1 EHMKEFPDELSLVLLYSISATIISTFVALLSVPNASAWKI 120
            E +KEFPDELS+V  Y++ A I+++ V LL   N+SAWKI
Sbjct:  149 EILKEFPDELSMVFFYNLCAAIVASIVGLLGEKNSSAWKI 188

[Close]

BLAST of FG537217 vs. Soybean peptides
Match: Glyma19g01460.2|PACid:16311558 ()

HSP 1 Score: 50.0618 bits (118), Expect = 5.332e-7
Identity = 22/40 (55.00%), Postives = 30/40 (75.00%), Query Frame = 1

Query:    1 EHMKEFPDELSLVLLYSISATIISTFVALLSVPNASAWKI 120
            E +KEFPDELS+V  Y++ A I+++ V LL   N+SAWKI
Sbjct:  149 EILKEFPDELSMVFFYNLCAAIVASIVGLLGEKNSSAWKI 188

[Close]

BLAST of FG537217 vs. Soybean peptides
Match: Glyma19g01460.1|PACid:16311557 ()

HSP 1 Score: 50.0618 bits (118), Expect = 5.332e-7
Identity = 22/40 (55.00%), Postives = 30/40 (75.00%), Query Frame = 1

Query:    1 EHMKEFPDELSLVLLYSISATIISTFVALLSVPNASAWKI 120
            E +KEFPDELS+V  Y++ A I+++ V LL   N+SAWKI
Sbjct:  209 EILKEFPDELSMVFFYNLCAAIVASIVGLLGEKNSSAWKI 248

The following BLAST results are available for this feature:

BLAST of FG537217 vs. Lotus protein
BLAST of FG537217 vs. Soybean peptides

BLAST of FG537217 vs. Lotus protein
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Lotus proteins)
Total hits: 1


Match Name	E-value	Identity	Description
chr2.CM0081.910.r2.a	8.335e-10	60.98	+ phase: 0	[more]

BLAST of FG537217 vs. Soybean peptides
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides)
Total hits: 6


Match Name	E-value	Identity
Glyma19g01450.1\|PACid:16311556	4.362e-9	60.98	[more]
Glyma19g01430.1\|PACid:16311554	4.823e-8	56.76	[more]
Glyma19g01460.4\|PACid:16311560	5.332e-7	55.00	[more]
Glyma19g01460.3\|PACid:16311559	5.332e-7	55.00	[more]
Glyma19g01460.2\|PACid:16311558	5.332e-7	55.00	[more]
Glyma19g01460.1\|PACid:16311557	5.332e-7	55.00	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v2
Date Performed: 2011-04-27


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 44..54 score

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 44..54 score

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v2
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FG537217 ID=FG537217; Name=FG537217; organism=Pisum sativum; type=EST; length=338bp
GAACATATGAAGGAGTTCCCAGATGAACTAAGTTTAGTCTTGTTATACTC
CATTAGTGCAACCATAATATCAACATTTGTAGCTTTGTTATCAGTTCCAA
ATGCAAGTGCCTGGAAAATAGGACTAAATCTCTCACTCATCTCCATTGTT
TCCTCTGTAAGTTGTACTGCAAATAGGATTAAAGGATTGAGCATCGCATT
TGAAACTGCTCTTTACTGCAAACAAGTTCTTTAGCTTGTTCTTTTTGTTT
AACTTATATTTATATGTATTTTTTTAGATTGAAGAAAAAGAGTCTCCATT
GGTTCTATATTGATGAGTAATTCAATTGTAAATTAATT

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