AM161788
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of AM161788 vs. TrEMBL
Match: B7FFG4_MEDTR (ATP-dependent Clp protease proteolytic subunit (Fragment) OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 7.938e-30 Identity = 62/74 (83.78%), Postives = 70/74 (94.59%), Query Frame = -1 Query: 2 FAGHKLRPPCLNPASFRSSGAKRSVVTMVIPFQRGSAREQPPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 223 F+GHKLRPPCLNPA+F+SSG+KR VVTMVIPF RG+A EQPPPDLASYL+KNRIVYLGM L+PSVTELMVAEF+ Sbjct: 61 FSGHKLRPPCLNPATFQSSGSKRGVVTMVIPFSRGTAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELMVAEFL 134
BLAST of AM161788 vs. TrEMBL
Match: D0EX73_9ROSA (ATP-dependent Clp protease proteolytic subunit OS=Eriobotrya japonica PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 6.954e-26 Identity = 59/74 (79.73%), Postives = 65/74 (87.84%), Query Frame = -1 Query: 2 FAGHKLRPPCLNPASFRSSGAKRSVVTMVIPFQRGSAREQPPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 223 F+GHKLRP LNPASFR S KR VVTMVI FQRGSA EQPPPDLASYL+KNRIVYLGM L+PSVTEL++AEF+ Sbjct: 61 FSGHKLRPSSLNPASFRGSEPKRGVVTMVILFQRGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFL 134
BLAST of AM161788 vs. TrEMBL
Match: C6T8Y5_SOYBN (ATP-dependent Clp protease proteolytic subunit OS=Glycine max PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 6.954e-26 Identity = 58/74 (78.38%), Postives = 65/74 (87.84%), Query Frame = -1 Query: 2 FAGHKLRPPCLNPASFRSSGAKRSVVTMVIPFQRGSAREQPPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 223 F+GHKLR LNP SFR S +KR VVTMVIPFQRGSA EQPPPDLASYL+KNRIVYLGM L+PSVTEL++AEF+ Sbjct: 61 FSGHKLRLSSLNPGSFRGSNSKRGVVTMVIPFQRGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFL 134
BLAST of AM161788 vs. TrEMBL
Match: A9PAS6_POPTR (ATP-dependent Clp protease proteolytic subunit OS=Populus trichocarpa GN=POPTRDRAFT_580163 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 9.082e-26 Identity = 58/74 (78.38%), Postives = 65/74 (87.84%), Query Frame = -1 Query: 2 FAGHKLRPPCLNPASFRSSGAKRSVVTMVIPFQRGSAREQPPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 223 F+G K+RP CLNPAS SS KRSVVTMVIP+ RGSA EQPPPDLASYLFKNRIVYLGM L+PSVTEL++AEF+ Sbjct: 67 FSGTKIRPECLNPASISSSKGKRSVVTMVIPYTRGSAWEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFL 140
BLAST of AM161788 vs. TrEMBL
Match: B9SZ03_RICCO (ATP-dependent Clp protease proteolytic subunit OS=Ricinus communis GN=RCOM_0120930 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.311e-24 Identity = 56/74 (75.68%), Postives = 64/74 (86.49%), Query Frame = -1 Query: 2 FAGHKLRPPCLNPASFRSSGAKRSVVTMVIPFQRGSAREQPPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 223 F+G K+RP CLNPAS + KRSVVTMVIP+ RGSA EQPPPDLASYLFKNRIVYLGM L+PSVTEL++AEF+ Sbjct: 71 FSGMKVRPECLNPASISNFRGKRSVVTMVIPYTRGSAWEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFL 144
BLAST of AM161788 vs. TrEMBL
Match: D7MC33_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_493172 PE=4 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 9.399e-23 Identity = 54/74 (72.97%), Postives = 60/74 (81.08%), Query Frame = -1 Query: 2 FAGHKLRPPCLNPASFRSSGAKRSVVTMVIPFQRGSAREQPPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 223 F G KLR LNP + SS KR VVTMVIPF +GSA EQPPPDLASYLFKNRIVYLGM L+PSVTEL++AEF+ Sbjct: 62 FCGAKLRAESLNPLNLSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFL 135
BLAST of AM161788 vs. TrEMBL
Match: D7UDW7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_204.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00003696001 PE=4 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 6.092e-22 Identity = 53/74 (71.62%), Postives = 60/74 (81.08%), Query Frame = -1 Query: 2 FAGHKLRPPCLNPASFRSSGAKRSVVTMVIPFQRGSAREQPPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 223 F+G K+RP L ASF S AKR VTMVIPF RGSA +QPPPDL SYLFKNRIVYLGM L+PSVTEL++AEF+ Sbjct: 39 FSGQKIRPSSLYSASFSGSHAKRGGVTMVIPFTRGSALDQPPPDLPSYLFKNRIVYLGMSLVPSVTELILAEFL 112
BLAST of AM161788 vs. TrEMBL
Match: Q5NBF5_ORYSJ (ATP-dependent Clp protease proteolytic subunit OS=Oryza sativa subsp. japonica GN=P0693B08.13 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.189e-17 Identity = 46/71 (64.79%), Postives = 56/71 (78.87%), Query Frame = -1 Query: 2 LRPPCLNPASFRS--SGAKRSVVTMVIPFQRGSAREQPPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 208 L PP +PA+ G R VV MV+PF RG+A +QPPPDLAS+L+KNRIVYLGMCL+PSVTELM+AEF+ Sbjct: 58 LAPPRPDPAAPGGCGGGGARDVVAMVVPFLRGTAWQQPPPDLASFLYKNRIVYLGMCLVPSVTELMLAEFL 128
BLAST of AM161788 vs. TrEMBL
Match: Q0JNQ7_ORYSJ (ATP-dependent Clp protease proteolytic subunit OS=Oryza sativa subsp. japonica GN=Os01g0271400 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.189e-17 Identity = 46/71 (64.79%), Postives = 56/71 (78.87%), Query Frame = -1 Query: 2 LRPPCLNPASFRS--SGAKRSVVTMVIPFQRGSAREQPPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 208 L PP +PA+ G R VV MV+PF RG+A +QPPPDLAS+L+KNRIVYLGMCL+PSVTELM+AEF+ Sbjct: 58 LAPPRPDPAAPGGCGGGGARDVVAMVVPFLRGTAWQQPPPDLASFLYKNRIVYLGMCLVPSVTELMLAEFL 128
BLAST of AM161788 vs. TrEMBL
Match: B4FNF5_MAIZE (ATP-dependent Clp protease proteolytic subunit OS=Zea mays PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.649e-17 Identity = 50/75 (66.67%), Postives = 57/75 (76.00%), Query Frame = -1 Query: 2 AGHKLR--PPCLNPASFRSSGAKRSVVTMVIPFQRGSAREQPPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 220 AG K R P PA GA R VV MV+PF RG+A EQPPPDLAS+L+KNRIVYLGMCL+PSVTELM+AEF+ Sbjct: 46 AGAKPRFLSPHREPAVDGGRGA-RDVVAMVVPFLRGAAWEQPPPDLASFLYKNRIVYLGMCLVPSVTELMLAEFL 119
BLAST of AM161788 vs. SwissProt
Match: CLPR4_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic OS=Arabidopsis thaliana GN=CLPR4 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.663e-24 Identity = 54/72 (75.00%), Postives = 60/72 (83.33%), Query Frame = -1 Query: 2 GHKLRPPCLNPASFRSSGAKRSVVTMVIPFQRGSAREQPPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 217 G KLR LNP +F SS KR VVTMVIPF +GSA EQPPPDLASYLFKNRIVYLGM L+PSVTEL++AEF+ Sbjct: 64 GAKLRAESLNPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFL 135
BLAST of AM161788 vs. TAIR peptide
Match: AT4G17040.1 (| Symbols: CLPR4 | CLP protease R subunit 4 | chr4:9586740-9589297 REVERSE LENGTH=305) HSP 1 Score: 109.768 bits (273), Expect = 3.619e-25 Identity = 54/72 (75.00%), Postives = 60/72 (83.33%), Query Frame = -1 Query: 2 GHKLRPPCLNPASFRSSGAKRSVVTMVIPFQRGSAREQPPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 217 G KLR LNP +F SS KR VVTMVIPF +GSA EQPPPDLASYLFKNRIVYLGM L+PSVTEL++AEF+ Sbjct: 64 GAKLRAESLNPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFL 135
BLAST of AM161788 vs. TAIR peptide
Match: AT1G09130.3 (| Symbols: | ATP-dependent caseinolytic (Clp) protease/crotonase family protein | chr1:2939731-2942217 REVERSE LENGTH=370) HSP 1 Score: 50.0618 bits (118), Expect = 3.403e-7 Identity = 23/34 (67.65%), Postives = 27/34 (79.41%), Query Frame = -1 Query: 2 PPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 103 PPPDL S L RIVY+GM L+P+VTEL+VAE M Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELM 151
BLAST of AM161788 vs. TAIR peptide
Match: AT1G09130.2 (| Symbols: | ATP-dependent caseinolytic (Clp) protease/crotonase family protein | chr1:2940063-2942217 REVERSE LENGTH=330) HSP 1 Score: 50.0618 bits (118), Expect = 3.403e-7 Identity = 23/34 (67.65%), Postives = 27/34 (79.41%), Query Frame = -1 Query: 2 PPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 103 PPPDL S L RIVY+GM L+P+VTEL+VAE M Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELM 151
BLAST of AM161788 vs. TAIR peptide
Match: AT1G09130.1 (| Symbols: | ATP-dependent caseinolytic (Clp) protease/crotonase family protein | chr1:2940063-2942217 REVERSE LENGTH=330) HSP 1 Score: 50.0618 bits (118), Expect = 3.403e-7 Identity = 23/34 (67.65%), Postives = 27/34 (79.41%), Query Frame = -1 Query: 2 PPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 103 PPPDL S L RIVY+GM L+P+VTEL+VAE M Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELM 151 The following BLAST results are available for this feature:
BLAST of AM161788 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of AM161788 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 1
BLAST of AM161788 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >AM161788 ID=AM161788; Name=AM161788; organism=Pisum sativum; type=EST; length=223bpback to top |