AM161788

EST Overview
NameAM161788
Unique NameAM161788
TypeEST
OrganismPisum sativum (pea)
Sequence length223
Libraries
Library NameType
LIBEST_019360 Pisum sativum leaf vegetativecdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology
BLAST of AM161788 vs. TrEMBL
Match: B7FFG4_MEDTR (ATP-dependent Clp protease proteolytic subunit (Fragment) OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 7.938e-30
Identity = 62/74 (83.78%), Postives = 70/74 (94.59%), Query Frame = -1
Query:    2 FAGHKLRPPCLNPASFRSSGAKRSVVTMVIPFQRGSAREQPPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 223
            F+GHKLRPPCLNPA+F+SSG+KR VVTMVIPF RG+A EQPPPDLASYL+KNRIVYLGM L+PSVTELMVAEF+
Sbjct:   61 FSGHKLRPPCLNPATFQSSGSKRGVVTMVIPFSRGTAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELMVAEFL 134          
BLAST of AM161788 vs. TrEMBL
Match: D0EX73_9ROSA (ATP-dependent Clp protease proteolytic subunit OS=Eriobotrya japonica PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.954e-26
Identity = 59/74 (79.73%), Postives = 65/74 (87.84%), Query Frame = -1
Query:    2 FAGHKLRPPCLNPASFRSSGAKRSVVTMVIPFQRGSAREQPPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 223
            F+GHKLRP  LNPASFR S  KR VVTMVI FQRGSA EQPPPDLASYL+KNRIVYLGM L+PSVTEL++AEF+
Sbjct:   61 FSGHKLRPSSLNPASFRGSEPKRGVVTMVILFQRGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFL 134          
BLAST of AM161788 vs. TrEMBL
Match: C6T8Y5_SOYBN (ATP-dependent Clp protease proteolytic subunit OS=Glycine max PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.954e-26
Identity = 58/74 (78.38%), Postives = 65/74 (87.84%), Query Frame = -1
Query:    2 FAGHKLRPPCLNPASFRSSGAKRSVVTMVIPFQRGSAREQPPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 223
            F+GHKLR   LNP SFR S +KR VVTMVIPFQRGSA EQPPPDLASYL+KNRIVYLGM L+PSVTEL++AEF+
Sbjct:   61 FSGHKLRLSSLNPGSFRGSNSKRGVVTMVIPFQRGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFL 134          
BLAST of AM161788 vs. TrEMBL
Match: A9PAS6_POPTR (ATP-dependent Clp protease proteolytic subunit OS=Populus trichocarpa GN=POPTRDRAFT_580163 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 9.082e-26
Identity = 58/74 (78.38%), Postives = 65/74 (87.84%), Query Frame = -1
Query:    2 FAGHKLRPPCLNPASFRSSGAKRSVVTMVIPFQRGSAREQPPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 223
            F+G K+RP CLNPAS  SS  KRSVVTMVIP+ RGSA EQPPPDLASYLFKNRIVYLGM L+PSVTEL++AEF+
Sbjct:   67 FSGTKIRPECLNPASISSSKGKRSVVTMVIPYTRGSAWEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFL 140          
BLAST of AM161788 vs. TrEMBL
Match: B9SZ03_RICCO (ATP-dependent Clp protease proteolytic subunit OS=Ricinus communis GN=RCOM_0120930 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.311e-24
Identity = 56/74 (75.68%), Postives = 64/74 (86.49%), Query Frame = -1
Query:    2 FAGHKLRPPCLNPASFRSSGAKRSVVTMVIPFQRGSAREQPPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 223
            F+G K+RP CLNPAS  +   KRSVVTMVIP+ RGSA EQPPPDLASYLFKNRIVYLGM L+PSVTEL++AEF+
Sbjct:   71 FSGMKVRPECLNPASISNFRGKRSVVTMVIPYTRGSAWEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFL 144          
BLAST of AM161788 vs. TrEMBL
Match: D7MC33_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_493172 PE=4 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 9.399e-23
Identity = 54/74 (72.97%), Postives = 60/74 (81.08%), Query Frame = -1
Query:    2 FAGHKLRPPCLNPASFRSSGAKRSVVTMVIPFQRGSAREQPPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 223
            F G KLR   LNP +  SS  KR VVTMVIPF +GSA EQPPPDLASYLFKNRIVYLGM L+PSVTEL++AEF+
Sbjct:   62 FCGAKLRAESLNPLNLSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFL 135          
BLAST of AM161788 vs. TrEMBL
Match: D7UDW7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_204.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00003696001 PE=4 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.092e-22
Identity = 53/74 (71.62%), Postives = 60/74 (81.08%), Query Frame = -1
Query:    2 FAGHKLRPPCLNPASFRSSGAKRSVVTMVIPFQRGSAREQPPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 223
            F+G K+RP  L  ASF  S AKR  VTMVIPF RGSA +QPPPDL SYLFKNRIVYLGM L+PSVTEL++AEF+
Sbjct:   39 FSGQKIRPSSLYSASFSGSHAKRGGVTMVIPFTRGSALDQPPPDLPSYLFKNRIVYLGMSLVPSVTELILAEFL 112          
BLAST of AM161788 vs. TrEMBL
Match: Q5NBF5_ORYSJ (ATP-dependent Clp protease proteolytic subunit OS=Oryza sativa subsp. japonica GN=P0693B08.13 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.189e-17
Identity = 46/71 (64.79%), Postives = 56/71 (78.87%), Query Frame = -1
Query:    2 LRPPCLNPASFRS--SGAKRSVVTMVIPFQRGSAREQPPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 208
            L PP  +PA+      G  R VV MV+PF RG+A +QPPPDLAS+L+KNRIVYLGMCL+PSVTELM+AEF+
Sbjct:   58 LAPPRPDPAAPGGCGGGGARDVVAMVVPFLRGTAWQQPPPDLASFLYKNRIVYLGMCLVPSVTELMLAEFL 128          
BLAST of AM161788 vs. TrEMBL
Match: Q0JNQ7_ORYSJ (ATP-dependent Clp protease proteolytic subunit OS=Oryza sativa subsp. japonica GN=Os01g0271400 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.189e-17
Identity = 46/71 (64.79%), Postives = 56/71 (78.87%), Query Frame = -1
Query:    2 LRPPCLNPASFRS--SGAKRSVVTMVIPFQRGSAREQPPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 208
            L PP  +PA+      G  R VV MV+PF RG+A +QPPPDLAS+L+KNRIVYLGMCL+PSVTELM+AEF+
Sbjct:   58 LAPPRPDPAAPGGCGGGGARDVVAMVVPFLRGTAWQQPPPDLASFLYKNRIVYLGMCLVPSVTELMLAEFL 128          
BLAST of AM161788 vs. TrEMBL
Match: B4FNF5_MAIZE (ATP-dependent Clp protease proteolytic subunit OS=Zea mays PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.649e-17
Identity = 50/75 (66.67%), Postives = 57/75 (76.00%), Query Frame = -1
Query:    2 AGHKLR--PPCLNPASFRSSGAKRSVVTMVIPFQRGSAREQPPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 220
            AG K R   P   PA     GA R VV MV+PF RG+A EQPPPDLAS+L+KNRIVYLGMCL+PSVTELM+AEF+
Sbjct:   46 AGAKPRFLSPHREPAVDGGRGA-RDVVAMVVPFLRGAAWEQPPPDLASFLYKNRIVYLGMCLVPSVTELMLAEFL 119          
BLAST of AM161788 vs. SwissProt
Match: CLPR4_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic OS=Arabidopsis thaliana GN=CLPR4 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.663e-24
Identity = 54/72 (75.00%), Postives = 60/72 (83.33%), Query Frame = -1
Query:    2 GHKLRPPCLNPASFRSSGAKRSVVTMVIPFQRGSAREQPPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 217
            G KLR   LNP +F SS  KR VVTMVIPF +GSA EQPPPDLASYLFKNRIVYLGM L+PSVTEL++AEF+
Sbjct:   64 GAKLRAESLNPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFL 135          
BLAST of AM161788 vs. TAIR peptide
Match: AT4G17040.1 (| Symbols: CLPR4 | CLP protease R subunit 4 | chr4:9586740-9589297 REVERSE LENGTH=305)

HSP 1 Score: 109.768 bits (273), Expect = 3.619e-25
Identity = 54/72 (75.00%), Postives = 60/72 (83.33%), Query Frame = -1
Query:    2 GHKLRPPCLNPASFRSSGAKRSVVTMVIPFQRGSAREQPPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 217
            G KLR   LNP +F SS  KR VVTMVIPF +GSA EQPPPDLASYLFKNRIVYLGM L+PSVTEL++AEF+
Sbjct:   64 GAKLRAESLNPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFL 135          
BLAST of AM161788 vs. TAIR peptide
Match: AT1G09130.3 (| Symbols: | ATP-dependent caseinolytic (Clp) protease/crotonase family protein | chr1:2939731-2942217 REVERSE LENGTH=370)

HSP 1 Score: 50.0618 bits (118), Expect = 3.403e-7
Identity = 23/34 (67.65%), Postives = 27/34 (79.41%), Query Frame = -1
Query:    2 PPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 103
            PPPDL S L   RIVY+GM L+P+VTEL+VAE M
Sbjct:  118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELM 151          
BLAST of AM161788 vs. TAIR peptide
Match: AT1G09130.2 (| Symbols: | ATP-dependent caseinolytic (Clp) protease/crotonase family protein | chr1:2940063-2942217 REVERSE LENGTH=330)

HSP 1 Score: 50.0618 bits (118), Expect = 3.403e-7
Identity = 23/34 (67.65%), Postives = 27/34 (79.41%), Query Frame = -1
Query:    2 PPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 103
            PPPDL S L   RIVY+GM L+P+VTEL+VAE M
Sbjct:  118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELM 151          
BLAST of AM161788 vs. TAIR peptide
Match: AT1G09130.1 (| Symbols: | ATP-dependent caseinolytic (Clp) protease/crotonase family protein | chr1:2940063-2942217 REVERSE LENGTH=330)

HSP 1 Score: 50.0618 bits (118), Expect = 3.403e-7
Identity = 23/34 (67.65%), Postives = 27/34 (79.41%), Query Frame = -1
Query:    2 PPPDLASYLFKNRIVYLGMCLIPSVTELMVAEFM 103
            PPPDL S L   RIVY+GM L+P+VTEL+VAE M
Sbjct:  118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELM 151          
The following BLAST results are available for this feature:
BLAST of AM161788 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B7FFG4_MEDTR7.938e-3083.78ATP-dependent Clp protease proteolytic subunit (Fr... [more]
D0EX73_9ROSA6.954e-2679.73ATP-dependent Clp protease proteolytic subunit OS=... [more]
C6T8Y5_SOYBN6.954e-2678.38ATP-dependent Clp protease proteolytic subunit OS=... [more]
A9PAS6_POPTR9.082e-2678.38ATP-dependent Clp protease proteolytic subunit OS=... [more]
B9SZ03_RICCO1.311e-2475.68ATP-dependent Clp protease proteolytic subunit OS=... [more]
D7MC33_ARALY9.399e-2372.97Putative uncharacterized protein OS=Arabidopsis ly... [more]
D7UDW7_VITVI6.092e-2271.62Whole genome shotgun sequence of line PN40024, sca... [more]
Q5NBF5_ORYSJ1.189e-1764.79ATP-dependent Clp protease proteolytic subunit OS=... [more]
Q0JNQ7_ORYSJ1.189e-1764.79ATP-dependent Clp protease proteolytic subunit OS=... [more]
B4FNF5_MAIZE2.649e-1766.67ATP-dependent Clp protease proteolytic subunit OS=... [more]
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BLAST of AM161788 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
CLPR4_ARATH4.663e-2475.00ATP-dependent Clp protease proteolytic subunit-rel... [more]
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BLAST of AM161788 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT4G17040.13.619e-2575.00| Symbols: CLPR4 | CLP protease R subunit 4 | chr4... [more]
AT1G09130.33.403e-767.65| Symbols: | ATP-dependent caseinolytic (Clp) pro... [more]
AT1G09130.23.403e-767.65| Symbols: | ATP-dependent caseinolytic (Clp) pro... [more]
AT1G09130.13.403e-767.65| Symbols: | ATP-dependent caseinolytic (Clp) pro... [more]
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Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>AM161788 ID=AM161788; Name=AM161788; organism=Pisum sativum; type=EST; length=223bp
ACATAAATTCAGCAACCATCAACTCTGTGACGGATGGAATGAGACACATG
CCCAAGTAAACAATTCGATTTTTGAACAAGTAAGAAGCCAAGTCTGGTGG
AGGTTGCTCCCGCGCAGACCCTCTTTGGAAAGGAATAACCATAGTAACGA
CGCTTCTTTTAGCGCCGGAACTTCGAAATGACGCCGGATTGAGGCAAGGA
GGTCGGAGCTTGTGGCCGGCGAA
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