EX569293

EST Overview
NameEX569293
Unique NameEX569293
TypeEST
OrganismPisum sativum (pea)
Sequence length293
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of EX569293 vs. TrEMBL
Match: C6TFM6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 5.443e-23
Identity = 53/58 (91.38%), Postives = 55/58 (94.83%), Query Frame = 1
Query:    1 LPTRKEGIFVMPTERITILSSYYYDTEIENCEQDRSILKLRLAASAVEVERQRMKCFP 174
            LPTRKEGIFVMP ERITILSSYYYDTE ENCE+DRSILK RLAASA+EVERQRMKCFP
Sbjct:  169 LPTRKEGIFVMPMERITILSSYYYDTETENCEEDRSILKRRLAASAIEVERQRMKCFP 226          
BLAST of EX569293 vs. TrEMBL
Match: B7FMU5_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 7.109e-23
Identity = 52/58 (89.66%), Postives = 55/58 (94.83%), Query Frame = 1
Query:    1 LPTRKEGIFVMPTERITILSSYYYDTEIENCEQDRSILKLRLAASAVEVERQRMKCFP 174
            LPTR+EGIFVMPTERITILSSYYYDTE E CEQDRS+LK RLAASA+EVERQRMKCFP
Sbjct:  163 LPTRREGIFVMPTERITILSSYYYDTEAETCEQDRSVLKRRLAASAIEVERQRMKCFP 220          
BLAST of EX569293 vs. TrEMBL
Match: B9HXT8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_657869 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.095e-21
Identity = 48/58 (82.76%), Postives = 56/58 (96.55%), Query Frame = 1
Query:    1 LPTRKEGIFVMPTERITILSSYYYDTEIENCEQDRSILKLRLAASAVEVERQRMKCFP 174
            L TRKEGIFVMPTERITILSSYYYDTE+E+CE++RS+LK RL+ASAVE+E+QRMKCFP
Sbjct:  166 LRTRKEGIFVMPTERITILSSYYYDTEMESCEEERSVLKRRLSASAVEIEKQRMKCFP 223          
BLAST of EX569293 vs. TrEMBL
Match: D7TNB2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_26.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00020024001 PE=4 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.936e-20
Identity = 47/58 (81.03%), Postives = 54/58 (93.10%), Query Frame = 1
Query:    1 LPTRKEGIFVMPTERITILSSYYYDTEIENCEQDRSILKLRLAASAVEVERQRMKCFP 174
            LPTR+EGIFVMPTERITILSSY+YDT++E CEQ++S LK RLAAS VE+ERQRMKCFP
Sbjct:  169 LPTRREGIFVMPTERITILSSYFYDTKMETCEQEKSTLKRRLAASVVEIERQRMKCFP 226          
BLAST of EX569293 vs. TrEMBL
Match: Q8LDR3_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana GN=At1g26940/T2P11_13 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.313e-20
Identity = 46/58 (79.31%), Postives = 55/58 (94.83%), Query Frame = 1
Query:    1 LPTRKEGIFVMPTERITILSSYYYDTEIENCEQDRSILKLRLAASAVEVERQRMKCFP 174
            +PTR+EGIFVMPTERITILS+YYYDT++E+CE++RS+LK RL AS VEVERQRMKCFP
Sbjct:  169 VPTRREGIFVMPTERITILSTYYYDTKMESCEEERSVLKRRLQASFVEVERQRMKCFP 226          
BLAST of EX569293 vs. TrEMBL
Match: B9S287_RICCO (Peptidyl-prolyl cis-trans isomerase, putative OS=Ricinus communis GN=RCOM_0697090 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.633e-20
Identity = 46/58 (79.31%), Postives = 53/58 (91.38%), Query Frame = 1
Query:    1 LPTRKEGIFVMPTERITILSSYYYDTEIENCEQDRSILKLRLAASAVEVERQRMKCFP 174
            +PT +EGIFVMPTERITILSSYYYD  IE CE++RSIL+ RLAASA+E+ERQRMKCFP
Sbjct:  165 VPTHREGIFVMPTERITILSSYYYDAVIETCEEERSILRRRLAASAIEIERQRMKCFP 222          
BLAST of EX569293 vs. TrEMBL
Match: D7KPM6_ARALY (Peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_472705 PE=4 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 9.609e-20
Identity = 45/58 (77.59%), Postives = 55/58 (94.83%), Query Frame = 1
Query:    1 LPTRKEGIFVMPTERITILSSYYYDTEIENCEQDRSILKLRLAASAVEVERQRMKCFP 174
            +PTR+EGIFVMPTERITILS+YYYDT++E+CE++RS+L+ RL AS VEVERQRMKCFP
Sbjct:  169 VPTRREGIFVMPTERITILSTYYYDTKMESCEEERSVLRRRLQASFVEVERQRMKCFP 226          
BLAST of EX569293 vs. TrEMBL
Match: Q5MG89_IPOBA (Putative cyclophilin type peptidyl-prolyl cis-trans isomerase OS=Ipomoea batatas PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.886e-18
Identity = 44/52 (84.62%), Postives = 50/52 (96.15%), Query Frame = 1
Query:    1 LPTRKEGIFVMPTERITILSSYYYDTEIENCEQDRSILKLRLAASAVEVERQ 156
            LPTR+EGIFVMPTERITILSSYYYDTE+E+CEQ+RS+LK RLAAS VE+ERQ
Sbjct:  134 LPTRREGIFVMPTERITILSSYYYDTEMESCEQERSLLKRRLAASVVEIERQ 185          
BLAST of EX569293 vs. TrEMBL
Match: Q9ZVG4_ARATH (T2P11.13 protein OS=Arabidopsis thaliana GN=T2P11.13 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.418e-16
Identity = 40/52 (76.92%), Postives = 49/52 (94.23%), Query Frame = 1
Query:    1 LPTRKEGIFVMPTERITILSSYYYDTEIENCEQDRSILKLRLAASAVEVERQ 156
            +PTR+EGIFVMPTERITILS+YYYDT++E+CE++RS+LK RL AS VEVERQ
Sbjct:  142 VPTRREGIFVMPTERITILSTYYYDTKMESCEEERSVLKRRLQASFVEVERQ 193          
BLAST of EX569293 vs. TrEMBL
Match: Q2R1J4_ORYSJ (Os11g0602900 protein OS=Oryza sativa subsp. japonica GN=Os11g0602900 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.449e-15
Identity = 39/57 (68.42%), Postives = 49/57 (85.96%), Query Frame = 1
Query:    1 LPTRKEGIFVMPTERITILSSYYYDTEIENCEQDRSILKLRLAASAVEVERQRMKCF 171
            LPTR+EGIFVMP ERI+ILS+YYYD ++E+CE ++SIL+ RL+ SA EVER R KCF
Sbjct:  178 LPTRREGIFVMPIERISILSTYYYDVDLESCEAEKSILRRRLSESASEVERWRRKCF 234          
BLAST of EX569293 vs. TAIR peptide
Match: AT1G26940.1 (| Symbols: | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein | chr1:9343193-9344962 FORWARD LENGTH=226)

HSP 1 Score: 100.908 bits (250), Expect = 1.697e-22
Identity = 46/58 (79.31%), Postives = 55/58 (94.83%), Query Frame = 1
Query:    1 LPTRKEGIFVMPTERITILSSYYYDTEIENCEQDRSILKLRLAASAVEVERQRMKCFP 174
            +PTR+EGIFVMPTERITILS+YYYDT++E+CE++RS+LK RL AS VEVERQRMKCFP
Sbjct:  169 VPTRREGIFVMPTERITILSTYYYDTKMESCEEERSVLKRRLQASFVEVERQRMKCFP 226          
The following BLAST results are available for this feature:
BLAST of EX569293 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TFM6_SOYBN5.443e-2391.38Putative uncharacterized protein OS=Glycine max PE... [more]
B7FMU5_MEDTR7.109e-2389.66Putative uncharacterized protein OS=Medicago trunc... [more]
B9HXT8_POPTR5.095e-2182.76Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7TNB2_VITVI1.936e-2081.03Whole genome shotgun sequence of line PN40024, sca... [more]
Q8LDR3_ARATH4.313e-2079.31Putative uncharacterized protein OS=Arabidopsis th... [more]
B9S287_RICCO5.633e-2079.31Peptidyl-prolyl cis-trans isomerase, putative OS=R... [more]
D7KPM6_ARALY9.609e-2077.59Peptidyl-prolyl cis-trans isomerase cyclophilin-ty... [more]
Q5MG89_IPOBA6.886e-1884.62Putative cyclophilin type peptidyl-prolyl cis-tran... [more]
Q9ZVG4_ARATH8.418e-1676.92T2P11.13 protein OS=Arabidopsis thaliana GN=T2P11.... [more]
Q2R1J4_ORYSJ2.449e-1568.42Os11g0602900 protein OS=Oryza sativa subsp. japoni... [more]
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BLAST of EX569293 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G26940.11.697e-2279.31| Symbols: | Cyclophilin-like peptidyl-prolyl cis... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11071CYCLOPHILINcoord: 1..49
score: 1.7
NoneNo IPR availablePANTHERPTHR11071:SF17PEPTIDYL-PROLYL CIS-TRANS ISOMERASE (CYCLOPHILIN)coord: 1..49
score: 1.7

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX569293 ID=EX569293; Name=EX569293; organism=Pisum sativum; type=EST; length=293bp
CTACCTACTCGTAAAGAGGGAATATTTGTAATGCCAACGGAGCGCATCAC
CATCCTCTCATCATATTACTATGATACGGAGATAGAAAATTGTGAGCAAG
ACAGATCGATTTTGAAGCTCAGGTTAGCTGCATCGGCTGTTGAAGTTGAA
AGACAGAGAATGAAATGCTTCCCCTAATAGAAGCGAGCTGGGAATGGAAT
GGAATGGAGTTGGAATGAAAGTGTTTGAGTCAGTCAAGAGCAAAAATTGT
TGACGCCTTACTTTTGTTTTTTGATTTTTTTCCCGGAGTTTTG
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