EX569756
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EX569756 vs. TrEMBL
Match: D7TB46_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_130.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00000264001 PE=4 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.264e-10 Identity = 30/37 (81.08%), Postives = 32/37 (86.49%), Query Frame = 2 Query: 2 CVVPKSQERPPIVGILTRHDFMPEHVLGLYPDIKHRK 112 CVVPKSQ RPPIVGILTRHDFMPEH+LGLYP + K Sbjct: 706 CVVPKSQGRPPIVGILTRHDFMPEHILGLYPHLSPHK 742
BLAST of EX569756 vs. TrEMBL
Match: B9P565_POPTR (Cl-channel clc-7 OS=Populus trichocarpa GN=POPTRDRAFT_585127 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.957e-10 Identity = 31/37 (83.78%), Postives = 32/37 (86.49%), Query Frame = 2 Query: 2 CVVPKSQERPPIVGILTRHDFMPEHVLGLYPDIKHRK 112 CVVP SQ RPPIVGILTRHDFMPEH+LGLYP IK K Sbjct: 40 CVVPISQGRPPIVGILTRHDFMPEHILGLYPHIKPHK 76
BLAST of EX569756 vs. TrEMBL
Match: B9INZ0_POPTR (Cl-channel clc-7 OS=Populus trichocarpa GN=POPTRDRAFT_573557 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.957e-10 Identity = 31/37 (83.78%), Postives = 32/37 (86.49%), Query Frame = 2 Query: 2 CVVPKSQERPPIVGILTRHDFMPEHVLGLYPDIKHRK 112 CVVP SQ RPPIVGILTRHDFMPEH+LGLYP IK K Sbjct: 743 CVVPISQGRPPIVGILTRHDFMPEHILGLYPHIKPHK 779
BLAST of EX569756 vs. TrEMBL
Match: D5LM39_PONTR (Chloride channel protein OS=Poncirus trifoliata PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 1.124e-9 Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 2 Query: 2 CVVPKSQERPPIVGILTRHDFMPEHVLGLYPDIKHR 109 CVVPK+ RPPIVGILTRHDFMPEHVLGLYP + +R Sbjct: 752 CVVPKTPGRPPIVGILTRHDFMPEHVLGLYPHVVNR 787
BLAST of EX569756 vs. TrEMBL
Match: D7MPG0_ARALY (CLC-C OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_495045 PE=4 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 2.504e-9 Identity = 29/33 (87.88%), Postives = 30/33 (90.91%), Query Frame = 2 Query: 2 CVVPKSQERPPIVGILTRHDFMPEHVLGLYPDI 100 CVVPK+ RPPIVGILTRHDFMPEHVLGLYP I Sbjct: 742 CVVPKTPGRPPIVGILTRHDFMPEHVLGLYPHI 774
BLAST of EX569756 vs. TrEMBL
Match: D3YP03_THEHA (Chloride channel C OS=Thellungiella halophila GN=CLC-C PE=2 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 3.270e-9 Identity = 28/33 (84.85%), Postives = 30/33 (90.91%), Query Frame = 2 Query: 2 CVVPKSQERPPIVGILTRHDFMPEHVLGLYPDI 100 CV+PK+ RPPIVGILTRHDFMPEHVLGLYP I Sbjct: 739 CVIPKTAGRPPIVGILTRHDFMPEHVLGLYPHI 771
BLAST of EX569756 vs. TrEMBL
Match: B9SPD9_RICCO (Chloride channel clc, putative OS=Ricinus communis GN=RCOM_0497360 PE=4 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 4.271e-9 Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 2 Query: 2 CVVPKSQERPPIVGILTRHDFMPEHVLGLYPDIKHRK 112 CVVPK+ RPPIVGILTRHDF+PEH+LGLYP I K Sbjct: 718 CVVPKTPGRPPIVGILTRHDFVPEHILGLYPHINPHK 754
BLAST of EX569756 vs. TrEMBL
Match: B9N789_POPTR (Cl-channel clc-7 OS=Populus trichocarpa GN=POPTRDRAFT_811492 PE=4 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 4.271e-9 Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 2 Query: 2 CVVPKSQERPPIVGILTRHDFMPEHVLGLYPDIKHRK 112 CVVPK+ RPPIVGILTRHDF P+H+LGLYP IK K Sbjct: 707 CVVPKTPGRPPIVGILTRHDFTPDHILGLYPHIKPHK 743
BLAST of EX569756 vs. TrEMBL
Match: D7MHM7_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_493576 PE=4 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 2.119e-8 Identity = 24/37 (64.86%), Postives = 30/37 (81.08%), Query Frame = 2 Query: 5 VVPKSQERPPIVGILTRHDFMPEHVLGLYPDIKHRKW 115 V+PK+ RPP+VGILTRHDFMPEH+LGL+P +W Sbjct: 716 VIPKTSNRPPVVGILTRHDFMPEHILGLHPSQSRSRW 752
BLAST of EX569756 vs. TrEMBL
Match: Q84QC8_MAIZE (Chloride channel OS=Zea mays PE=2 SV=2) HSP 1 Score: 61.6178 bits (148), Expect = 3.615e-8 Identity = 25/38 (65.79%), Postives = 32/38 (84.21%), Query Frame = 2 Query: 5 VVPKSQERPPIVGILTRHDFMPEHVLGLYPDIKHRKWH 118 VVPK+ +RPPIVGILTRHDFMPEH+ L+P++ K+H Sbjct: 743 VVPKTPDRPPIVGILTRHDFMPEHIHSLFPNLNPHKYH 780
BLAST of EX569756 vs. SwissProt
Match: CLCG_ARATH (Putative chloride channel-like protein CLC-g OS=Arabidopsis thaliana GN=At5g33280 PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 1.449e-10 Identity = 25/37 (67.57%), Postives = 31/37 (83.78%), Query Frame = 2 Query: 5 VVPKSQERPPIVGILTRHDFMPEHVLGLYPDIKHRKW 115 V+PK+ RPP+VGILTRHDFMPEH+LGL+P + KW Sbjct: 716 VIPKTSNRPPVVGILTRHDFMPEHILGLHPSVSRSKW 752
BLAST of EX569756 vs. SwissProt
Match: CLCC_ARATH (Chloride channel protein CLC-c OS=Arabidopsis thaliana GN=CLC-C PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 1.893e-10 Identity = 29/33 (87.88%), Postives = 30/33 (90.91%), Query Frame = 2 Query: 2 CVVPKSQERPPIVGILTRHDFMPEHVLGLYPDI 100 CVVPK+ RPPIVGILTRHDFMPEHVLGLYP I Sbjct: 743 CVVPKTPGRPPIVGILTRHDFMPEHVLGLYPHI 775
BLAST of EX569756 vs. TAIR peptide
Match: AT5G33280.1 (| Symbols: | Voltage-gated chloride channel family protein | chr5:12549280-12552305 FORWARD LENGTH=765) HSP 1 Score: 65.855 bits (159), Expect = 1.579e-11 Identity = 25/37 (67.57%), Postives = 31/37 (83.78%), Query Frame = 2 Query: 5 VVPKSQERPPIVGILTRHDFMPEHVLGLYPDIKHRKW 115 V+PK+ RPP+VGILTRHDFMPEH+LGL+P + KW Sbjct: 718 VIPKTSNRPPVVGILTRHDFMPEHILGLHPSVSRSKW 754
BLAST of EX569756 vs. TAIR peptide
Match: AT5G49890.1 (| Symbols: CLC-C, ATCLC-C | chloride channel C | chr5:20288489-20292143 REVERSE LENGTH=779) HSP 1 Score: 65.4698 bits (158), Expect = 2.062e-11 Identity = 29/33 (87.88%), Postives = 30/33 (90.91%), Query Frame = 2 Query: 2 CVVPKSQERPPIVGILTRHDFMPEHVLGLYPDI 100 CVVPK+ RPPIVGILTRHDFMPEHVLGLYP I Sbjct: 743 CVVPKTPGRPPIVGILTRHDFMPEHVLGLYPHI 775 The following BLAST results are available for this feature:
BLAST of EX569756 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of EX569756 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 2
BLAST of EX569756 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EX569756 ID=EX569756; Name=EX569756; organism=Pisum sativum; type=EST; length=539bpback to top |