EX569756

EST Overview
NameEX569756
Unique NameEX569756
TypeEST
OrganismPisum sativum (pea)
Sequence length539
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology
BLAST of EX569756 vs. TrEMBL
Match: D7TB46_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_130.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00000264001 PE=4 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.264e-10
Identity = 30/37 (81.08%), Postives = 32/37 (86.49%), Query Frame = 2
Query:    2 CVVPKSQERPPIVGILTRHDFMPEHVLGLYPDIKHRK 112
            CVVPKSQ RPPIVGILTRHDFMPEH+LGLYP +   K
Sbjct:  706 CVVPKSQGRPPIVGILTRHDFMPEHILGLYPHLSPHK 742          
BLAST of EX569756 vs. TrEMBL
Match: B9P565_POPTR (Cl-channel clc-7 OS=Populus trichocarpa GN=POPTRDRAFT_585127 PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.957e-10
Identity = 31/37 (83.78%), Postives = 32/37 (86.49%), Query Frame = 2
Query:    2 CVVPKSQERPPIVGILTRHDFMPEHVLGLYPDIKHRK 112
            CVVP SQ RPPIVGILTRHDFMPEH+LGLYP IK  K
Sbjct:   40 CVVPISQGRPPIVGILTRHDFMPEHILGLYPHIKPHK 76          
BLAST of EX569756 vs. TrEMBL
Match: B9INZ0_POPTR (Cl-channel clc-7 OS=Populus trichocarpa GN=POPTRDRAFT_573557 PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.957e-10
Identity = 31/37 (83.78%), Postives = 32/37 (86.49%), Query Frame = 2
Query:    2 CVVPKSQERPPIVGILTRHDFMPEHVLGLYPDIKHRK 112
            CVVP SQ RPPIVGILTRHDFMPEH+LGLYP IK  K
Sbjct:  743 CVVPISQGRPPIVGILTRHDFMPEHILGLYPHIKPHK 779          
BLAST of EX569756 vs. TrEMBL
Match: D5LM39_PONTR (Chloride channel protein OS=Poncirus trifoliata PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.124e-9
Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 2
Query:    2 CVVPKSQERPPIVGILTRHDFMPEHVLGLYPDIKHR 109
            CVVPK+  RPPIVGILTRHDFMPEHVLGLYP + +R
Sbjct:  752 CVVPKTPGRPPIVGILTRHDFMPEHVLGLYPHVVNR 787          
BLAST of EX569756 vs. TrEMBL
Match: D7MPG0_ARALY (CLC-C OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_495045 PE=4 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.504e-9
Identity = 29/33 (87.88%), Postives = 30/33 (90.91%), Query Frame = 2
Query:    2 CVVPKSQERPPIVGILTRHDFMPEHVLGLYPDI 100
            CVVPK+  RPPIVGILTRHDFMPEHVLGLYP I
Sbjct:  742 CVVPKTPGRPPIVGILTRHDFMPEHVLGLYPHI 774          
BLAST of EX569756 vs. TrEMBL
Match: D3YP03_THEHA (Chloride channel C OS=Thellungiella halophila GN=CLC-C PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 3.270e-9
Identity = 28/33 (84.85%), Postives = 30/33 (90.91%), Query Frame = 2
Query:    2 CVVPKSQERPPIVGILTRHDFMPEHVLGLYPDI 100
            CV+PK+  RPPIVGILTRHDFMPEHVLGLYP I
Sbjct:  739 CVIPKTAGRPPIVGILTRHDFMPEHVLGLYPHI 771          
BLAST of EX569756 vs. TrEMBL
Match: B9SPD9_RICCO (Chloride channel clc, putative OS=Ricinus communis GN=RCOM_0497360 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 4.271e-9
Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 2
Query:    2 CVVPKSQERPPIVGILTRHDFMPEHVLGLYPDIKHRK 112
            CVVPK+  RPPIVGILTRHDF+PEH+LGLYP I   K
Sbjct:  718 CVVPKTPGRPPIVGILTRHDFVPEHILGLYPHINPHK 754          
BLAST of EX569756 vs. TrEMBL
Match: B9N789_POPTR (Cl-channel clc-7 OS=Populus trichocarpa GN=POPTRDRAFT_811492 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 4.271e-9
Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 2
Query:    2 CVVPKSQERPPIVGILTRHDFMPEHVLGLYPDIKHRK 112
            CVVPK+  RPPIVGILTRHDF P+H+LGLYP IK  K
Sbjct:  707 CVVPKTPGRPPIVGILTRHDFTPDHILGLYPHIKPHK 743          
BLAST of EX569756 vs. TrEMBL
Match: D7MHM7_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_493576 PE=4 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 2.119e-8
Identity = 24/37 (64.86%), Postives = 30/37 (81.08%), Query Frame = 2
Query:    5 VVPKSQERPPIVGILTRHDFMPEHVLGLYPDIKHRKW 115
            V+PK+  RPP+VGILTRHDFMPEH+LGL+P     +W
Sbjct:  716 VIPKTSNRPPVVGILTRHDFMPEHILGLHPSQSRSRW 752          
BLAST of EX569756 vs. TrEMBL
Match: Q84QC8_MAIZE (Chloride channel OS=Zea mays PE=2 SV=2)

HSP 1 Score: 61.6178 bits (148), Expect = 3.615e-8
Identity = 25/38 (65.79%), Postives = 32/38 (84.21%), Query Frame = 2
Query:    5 VVPKSQERPPIVGILTRHDFMPEHVLGLYPDIKHRKWH 118
            VVPK+ +RPPIVGILTRHDFMPEH+  L+P++   K+H
Sbjct:  743 VVPKTPDRPPIVGILTRHDFMPEHIHSLFPNLNPHKYH 780          
BLAST of EX569756 vs. SwissProt
Match: CLCG_ARATH (Putative chloride channel-like protein CLC-g OS=Arabidopsis thaliana GN=At5g33280 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.449e-10
Identity = 25/37 (67.57%), Postives = 31/37 (83.78%), Query Frame = 2
Query:    5 VVPKSQERPPIVGILTRHDFMPEHVLGLYPDIKHRKW 115
            V+PK+  RPP+VGILTRHDFMPEH+LGL+P +   KW
Sbjct:  716 VIPKTSNRPPVVGILTRHDFMPEHILGLHPSVSRSKW 752          
BLAST of EX569756 vs. SwissProt
Match: CLCC_ARATH (Chloride channel protein CLC-c OS=Arabidopsis thaliana GN=CLC-C PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 1.893e-10
Identity = 29/33 (87.88%), Postives = 30/33 (90.91%), Query Frame = 2
Query:    2 CVVPKSQERPPIVGILTRHDFMPEHVLGLYPDI 100
            CVVPK+  RPPIVGILTRHDFMPEHVLGLYP I
Sbjct:  743 CVVPKTPGRPPIVGILTRHDFMPEHVLGLYPHI 775          
BLAST of EX569756 vs. TAIR peptide
Match: AT5G33280.1 (| Symbols: | Voltage-gated chloride channel family protein | chr5:12549280-12552305 FORWARD LENGTH=765)

HSP 1 Score: 65.855 bits (159), Expect = 1.579e-11
Identity = 25/37 (67.57%), Postives = 31/37 (83.78%), Query Frame = 2
Query:    5 VVPKSQERPPIVGILTRHDFMPEHVLGLYPDIKHRKW 115
            V+PK+  RPP+VGILTRHDFMPEH+LGL+P +   KW
Sbjct:  718 VIPKTSNRPPVVGILTRHDFMPEHILGLHPSVSRSKW 754          
BLAST of EX569756 vs. TAIR peptide
Match: AT5G49890.1 (| Symbols: CLC-C, ATCLC-C | chloride channel C | chr5:20288489-20292143 REVERSE LENGTH=779)

HSP 1 Score: 65.4698 bits (158), Expect = 2.062e-11
Identity = 29/33 (87.88%), Postives = 30/33 (90.91%), Query Frame = 2
Query:    2 CVVPKSQERPPIVGILTRHDFMPEHVLGLYPDI 100
            CVVPK+  RPPIVGILTRHDFMPEHVLGLYP I
Sbjct:  743 CVVPKTPGRPPIVGILTRHDFMPEHVLGLYPHI 775          
The following BLAST results are available for this feature:
BLAST of EX569756 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
D7TB46_VITVI2.264e-1081.08Whole genome shotgun sequence of line PN40024, sca... [more]
B9P565_POPTR2.957e-1083.78Cl-channel clc-7 OS=Populus trichocarpa GN=POPTRDR... [more]
B9INZ0_POPTR2.957e-1083.78Cl-channel clc-7 OS=Populus trichocarpa GN=POPTRDR... [more]
D5LM39_PONTR1.124e-980.56Chloride channel protein OS=Poncirus trifoliata PE... [more]
D7MPG0_ARALY2.504e-987.88CLC-C OS=Arabidopsis lyrata subsp. lyrata GN=ARALY... [more]
D3YP03_THEHA3.270e-984.85Chloride channel C OS=Thellungiella halophila GN=C... [more]
B9SPD9_RICCO4.271e-975.68Chloride channel clc, putative OS=Ricinus communis... [more]
B9N789_POPTR4.271e-975.68Cl-channel clc-7 OS=Populus trichocarpa GN=POPTRDR... [more]
D7MHM7_ARALY2.119e-864.86Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q84QC8_MAIZE3.615e-865.79Chloride channel OS=Zea mays PE=2 SV=2[more]
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BLAST of EX569756 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
CLCG_ARATH1.449e-1067.57Putative chloride channel-like protein CLC-g OS=Ar... [more]
CLCC_ARATH1.893e-1087.88Chloride channel protein CLC-c OS=Arabidopsis thal... [more]
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BLAST of EX569756 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G33280.11.579e-1167.57| Symbols: | Voltage-gated chloride channel famil... [more]
AT5G49890.12.062e-1187.88| Symbols: CLC-C, ATCLC-C | chloride channel C | c... [more]
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Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX569756 ID=EX569756; Name=EX569756; organism=Pisum sativum; type=EST; length=539bp
GTGTGTTGTTCCGAAGAGCCAAGAGAGACCTCCAATCGTCGGGATTCTGA
CGCGCCACGATTTCATGCCGGAACATGTTTTGGGACTTTACCCTGATATC
AAGCATCGCAAATGGCACTGAAGAAGGAATCTCAATGAAAGAATAATTCA
TTCTTCATGATTTAAGTTCTGCATTCGTTAGCTGCATTGAGATGATGAAA
GTTTTACAGTATACAGTGAGTTCAATAGTTCTTCACAGAATCCTTGAAGC
AAAACAAAATGCTGCTATGAGATGCAGTTGCTGCATAGTTTTGAGGGGGT
GTATTTAGCAACCGTGTAAGATATGTTTTGTTATTTATTATTACTATTTT
TTCTTCATGAAGTCAATATGAGTGCTTTTGAAACTATATAGGTATCAGTC
AACACCAATCAGTGTTGAAGTATACGGTCAAAAAATTCTTGTTATGTTGG
TTGTTGATTTTTTGGAATGGTTTTGTAAAGACTTTTAATTTTTGTATAAT
GTTGTTAATATTTGGCAAATGTATTGGCATTGTGAATGT
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