EX569864

EST Overview
NameEX569864
Unique NameEX569864
TypeEST
OrganismPisum sativum (pea)
Sequence length441
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of EX569864 vs. TrEMBL
Match: Q2HUA9_MEDTR (Embryo-specific 3 OS=Medicago truncatula GN=MtrDRAFT_AC149206g15v2 PE=4 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.081e-26
Identity = 50/62 (80.65%), Postives = 54/62 (87.10%), Query Frame = 1
Query:    1 VNGPCTYQLCYLYLYRTGRDGWKPESVTVSTFNYPPATFYYNTFIPNGIWYGFDNCRSYLPS 186
            +NGPCTY +CYLYLYR+G DGWKPESVTV T NY PATFYYN FIPNG+WYGFD CR YLPS
Sbjct:  107 INGPCTYPICYLYLYRSGYDGWKPESVTVYTHNYQPATFYYNAFIPNGVWYGFDYCRGYLPS 168          
BLAST of EX569864 vs. TrEMBL
Match: C6T3L6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.251e-23
Identity = 45/62 (72.58%), Postives = 50/62 (80.65%), Query Frame = 1
Query:    1 VNGPCTYQLCYLYLYRTGRDGWKPESVTVSTFNYPPATFYYNTFIPNGIWYGFDNCRSYLPS 186
            + GPCTYQ CYLYLYR+G DGW PE VTV ++ Y P TFYYNT+IPN IWYGFD CR YLPS
Sbjct:  104 IYGPCTYQTCYLYLYRSGYDGWMPEKVTVYSYYYQPVTFYYNTYIPNDIWYGFDYCRGYLPS 165          
BLAST of EX569864 vs. TrEMBL
Match: B9GH47_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_815264 PE=4 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 9.800e-20
Identity = 37/58 (63.79%), Postives = 48/58 (82.76%), Query Frame = 1
Query:    1 VNGPCTYQLCYLYLYRTGRDGWKPESVTVSTFNYPPATFYYNTFIPNGIWYGFDNCRS 174
            ++GPCTYQ+CY+YLYR G DGWKPES+T+S +     TFYYNTFIPN +WYGF++C +
Sbjct:  104 IDGPCTYQICYVYLYRNGYDGWKPESITISGYYTSSVTFYYNTFIPNAVWYGFNHCNA 161          
BLAST of EX569864 vs. TrEMBL
Match: D7T1V9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_22.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018477001 PE=4 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.848e-18
Identity = 35/56 (62.50%), Postives = 46/56 (82.14%), Query Frame = 1
Query:    1 VNGPCTYQLCYLYLYRTGRDGWKPESVTVSTFNYPPATFYYNTFIPNGIWYGFDNC 168
            +NGPCTYQ+C++ LYR+G DGWKPESV +  +N  P TFYYN F+P+G+W+GFD C
Sbjct:  106 INGPCTYQVCHVALYRSGMDGWKPESVKIYGYNSSPVTFYYNAFVPSGVWFGFDYC 161          
BLAST of EX569864 vs. TrEMBL
Match: B9RV51_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0899170 PE=4 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 9.172e-18
Identity = 37/62 (59.68%), Postives = 47/62 (75.81%), Query Frame = 1
Query:    1 VNGPCTYQLCYLYLYRTGRDGWKPESVTVSTFNYPPATFYYNTFIPNGIWYGFDNCRSYLPS 186
            + GPCTYQ+CY+YLYR+G DGWKP++VTV  +     TF YNTFIPNG+W+GF+ C   L S
Sbjct:  101 IKGPCTYQICYVYLYRSGYDGWKPKTVTVYGYYTKSVTFTYNTFIPNGVWFGFNYCNGALSS 162          
BLAST of EX569864 vs. TrEMBL
Match: C6SVB7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.198e-17
Identity = 35/56 (62.50%), Postives = 44/56 (78.57%), Query Frame = 1
Query:    1 VNGPCTYQLCYLYLYRTGRDGWKPESVTVSTFNYPPATFYYNTFIPNGIWYGFDNC 168
            + GPC YQ+CY+YLYR+G DGWKPESV ++ +N  P TFYYNT+IP   WYGF+ C
Sbjct:  105 ITGPCAYQICYVYLYRSGLDGWKPESVKINGYNGRPVTFYYNTYIPRDTWYGFNLC 160          
BLAST of EX569864 vs. TrEMBL
Match: D7U113_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00017309001 PE=4 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.565e-17
Identity = 35/58 (60.34%), Postives = 45/58 (77.59%), Query Frame = 1
Query:    1 VNGPCTYQLCYLYLYRTGRDGWKPESVTVSTFNYPPATFYYNTFIPNGIWYGFDNCRS 174
            V GPCT+Q+CY+YLYRTGRDGWKP++V +  +   P TFY+  F+P GIWYGF+ C S
Sbjct:  417 VKGPCTHQICYVYLYRTGRDGWKPDTVKIFGYYSKPVTFYFRAFLPGGIWYGFNYCSS 474          
BLAST of EX569864 vs. TrEMBL
Match: C6SVI7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.552e-17
Identity = 34/56 (60.71%), Postives = 44/56 (78.57%), Query Frame = 1
Query:    1 VNGPCTYQLCYLYLYRTGRDGWKPESVTVSTFNYPPATFYYNTFIPNGIWYGFDNC 168
            + GPC YQ+CY+YLYR+G DGWKPESV ++++N    TFYYNT+IP   WYGF+ C
Sbjct:  104 ITGPCAYQICYVYLYRSGLDGWKPESVKINSYNGRAVTFYYNTYIPRDTWYGFNLC 159          
BLAST of EX569864 vs. TrEMBL
Match: B9ICY2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_734053 PE=4 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.730e-16
Identity = 33/58 (56.90%), Postives = 46/58 (79.31%), Query Frame = 1
Query:    1 VNGPCTYQLCYLYLYRTGRDGWKPESVTVSTFNYPPATFYYNTFIPNGIWYGFDNCRS 174
            ++GPC YQ+CY+YLYR+GRDGWKP++V +S +     TF YNTFIP  +WYGF+ C++
Sbjct:  105 ISGPCAYQICYVYLYRSGRDGWKPDTVQISGYYSRTVTFTYNTFIPRDVWYGFNLCQN 162          
BLAST of EX569864 vs. TrEMBL
Match: Q1EMN1_PLAMJ (Embryo-specific protein 3 (Fragment) OS=Plantago major GN=ats3 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.259e-16
Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 1
Query:    1 VNGPCTYQLCYLYLYRTGRDGWKPESVTVSTFNYPPATFYYNTFIPNGIWYGFDNC 168
            + GPCTYQ+CY+YLYR+G DGW P  VT+  +N  P TFYYN  IP  IWYGF+ C
Sbjct:   34 IYGPCTYQICYIYLYRSGYDGWMPYGVTIYGYNSQPVTFYYNVNIPGDIWYGFNQC 89          
BLAST of EX569864 vs. TAIR peptide
Match: AT5G62200.1 (| Symbols: | Embryo-specific protein 3, (ATS3) | chr5:24984463-24985674 REVERSE LENGTH=190)

HSP 1 Score: 84.3445 bits (207), Expect = 2.853e-17
Identity = 31/58 (53.45%), Postives = 42/58 (72.41%), Query Frame = 1
Query:    1 VNGPCTYQLCYLYLYRTGRDGWKPESVTVSTFNYPPATFYYNTFIPNGIWYGFDNCRS 174
            +NGPCTYQ+CY+YLYR+G DGW P +V + +      TF YNT++P  +WYGF+ C S
Sbjct:  103 INGPCTYQICYVYLYRSGPDGWIPNTVKIYSHGSKAVTFPYNTYVPESVWYGFNYCNS 160          
BLAST of EX569864 vs. TAIR peptide
Match: AT2G41475.1 (| Symbols: | Embryo-specific protein 3, (ATS3) | chr2:17295259-17296329 REVERSE LENGTH=179)

HSP 1 Score: 78.5666 bits (192), Expect = 1.566e-15
Identity = 30/56 (53.57%), Postives = 39/56 (69.64%), Query Frame = 1
Query:    1 VNGPCTYQLCYLYLYRTGRDGWKPESVTVSTFNYPPATFYYNTFIPNGIWYGFDNC 168
            ++GPC   +CYLYL R G DGWKPE+V +   +    TFYYN F+PN +WYGF+ C
Sbjct:  103 ISGPCMRDVCYLYLLRQGSDGWKPENVKIYGSSIRSVTFYYNLFLPNSVWYGFNVC 158          
BLAST of EX569864 vs. TAIR peptide
Match: AT5G62210.1 (| Symbols: | Embryo-specific protein 3, (ATS3) | chr5:24986521-24987477 REVERSE LENGTH=223)

HSP 1 Score: 55.0694 bits (131), Expect = 1.854e-8
Identity = 22/58 (37.93%), Postives = 32/58 (55.17%), Query Frame = 1
Query:    1 VNGPCTYQLCYLYLYRTGRDGWKPESVTVSTFNYPPATFYYNTFIPNGIWYGFDNCRS 174
            V G C   +C +Y+YR+G DGW PE+V +         F +N  +P  IWYG + C +
Sbjct:   97 VKGKCLNTICSVYIYRSGTDGWIPETVEIYKEGSKSVKFDFNKNVPENIWYGNNYCNN 154          
The following BLAST results are available for this feature:
BLAST of EX569864 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q2HUA9_MEDTR1.081e-2680.65Embryo-specific 3 OS=Medicago truncatula GN=MtrDRA... [more]
C6T3L6_SOYBN4.251e-2372.58Putative uncharacterized protein OS=Glycine max PE... [more]
B9GH47_POPTR9.800e-2063.79Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7T1V9_VITVI1.848e-1862.50Whole genome shotgun sequence of line PN40024, sca... [more]
B9RV51_RICCO9.172e-1859.68Putative uncharacterized protein OS=Ricinus commun... [more]
C6SVB7_SOYBN1.198e-1762.50Putative uncharacterized protein OS=Glycine max PE... [more]
D7U113_VITVI1.565e-1760.34Whole genome shotgun sequence of line PN40024, sca... [more]
C6SVI7_SOYBN4.552e-1760.71Putative uncharacterized protein OS=Glycine max PE... [more]
B9ICY2_POPTR1.730e-1656.90Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q1EMN1_PLAMJ2.259e-1660.71Embryo-specific protein 3 (Fragment) OS=Plantago m... [more]
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BLAST of EX569864 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G62200.12.853e-1753.45| Symbols: | Embryo-specific protein 3, (ATS3) | ... [more]
AT2G41475.11.566e-1553.57| Symbols: | Embryo-specific protein 3, (ATS3) | ... [more]
AT5G62210.11.854e-837.93| Symbols: | Embryo-specific protein 3, (ATS3) | ... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010417Embryo-specific 3PFAMPF06232ATS3coord: 1..56
score: 3
NoneNo IPR availableSEGsegsegcoord: 29..45
score: NAcoord: 60..73
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX569864 ID=EX569864; Name=EX569864; organism=Pisum sativum; type=EST; length=441bp
GTAAACGGACCATGTACGTACCAATTATGCTATCTGTATTTATACAGAAC
AGGAAGGGATGGCTGGAAACCAGAGAGTGTCACGGTATCTACCTTTAACT
ACCCGCCTGCTACTTTCTACTACAATACTTTCATTCCTAATGGTATTTGG
TATGGTTTCGATAACTGCCGTAGTTACTTACCTTCCACCACTGCTGCAGC
AGCAGCAATCTAGTCGACCTTCTTAGCCCGTGGGCCGAGGAATAAATAAT
GATAGTTTCTTCTTACTCCGACATTTATCAAATACGCGACAAATTGCGTG
TTTTGAGAAATGTTGGAGACGGGAAGAAATTATCGGAAATAATATGGTTG
CAGTCCTACTGTGAAACCCTATGTTATGTGTGGGCCTTGTATAAGCCCTT
CATGAGGGGTTTTTGATATATGTTTCTAGGTTTTACTGTCT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR010417Embryo-specific_ATS3