EX570062

EST Overview
NameEX570062
Unique NameEX570062
TypeEST
OrganismPisum sativum (pea)
Sequence length321
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
[Close]
BLAST of EX570062 vs. TrEMBL
Match: C6TD78_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.391e-10
Identity = 34/48 (70.83%), Postives = 40/48 (83.33%), Query Frame = 2 
Query:    2 ESPLSSLEIKGTARAFTLVELSEGRVTKVAESWVAVVEDRTTLIEEYV 145
            ES L+S E KGT RAFTLVE+SEG V K+AESWV+V EDRTTL EE++
Sbjct:  263 ESALASPEAKGTRRAFTLVEISEGGVAKIAESWVSVAEDRTTLEEEHI 310
[Close]
BLAST of EX570062 vs. TrEMBL
Match: B9HAQ5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_653536 PE=4 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 7.142e-7
Identity = 27/48 (56.25%), Postives = 37/48 (77.08%), Query Frame = 2 
Query:    2 ESPLSSLEIKGTARAFTLVELSEGRVTKVAESWVAVVEDRTTLIEEYV 145
            E+ + S   +GT RAFTLVE+ EGRV K+AE+WV+V+ED T + EE+V
Sbjct:  298 ETSVFSPGSRGTMRAFTLVEILEGRVDKIAETWVSVIEDETAIGEEHV 345
The following BLAST results are available for this feature:
BLAST of EX570062 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
C6TD78_SOYBN1.391e-1070.83Putative uncharacterized protein OS=Glycine max PE... [more]
B9HAQ5_POPTR7.142e-756.25Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 12..29
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX570062 ID=EX570062; Name=EX570062; organism=Pisum sativum; type=EST; length=321bp
TGAAAGTCCTCTTTCCTCACTAGAGATAAAAGGCACAGCAAGAGCCTTTA
CTTTAGTTGAGCTTTCAGAAGGAAGAGTTACCAAGGTTGCAGAAAGTTGG
GTAGCAGTTGTCGAAGATAGGACCACATTAATAGAAGAGTATGTATTATT
TGAGCGCAATTAAGAGTCAAGATCCTCATCTTCTATGTTTAGATTCCTGC
TTCAGTCACATGGTTTTTAATGCATGGACAAATACAGCCCAAGGTGACAT
ATGTTTTGATACTAAACTCCTTATATAAAAGAATACATCGTATTTAATGT
TAATATATGGTGTAAGGATTG
back to top