EX571267

EST Overview
NameEX571267
Unique NameEX571267
TypeEST
OrganismPisum sativum (pea)
Sequence length589
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of EX571267 vs. TrEMBL
Match: Q2HU34_MEDTR (Nuclear factor related to kappa-B-binding protein , related OS=Medicago truncatula GN=MtrDRAFT_AC149490g14v2 PE=4 SV=2)

HSP 1 Score: 310.842 bits (795), Expect = 4.316e-83
Identity = 152/193 (78.76%), Postives = 169/193 (87.56%), Query Frame = 3
Query:    9 TQSKKKGSFAEQGNMRGAENYLSKNAKQKSKILNGGPLRNPAGKFIEENYPSGSDILIGGHDDWRQLYKSKNERMRGEPVERFDVPSSIAYAAEHKMKGRAGLDHSILRSKYLHDYGNDEEESLENRLLGGDENGVGHGRFWRKGQKNVAYKDEHNERSDAPLLGCNSTMKKRKMKHGAADSVGRDEDANLLS 587
            TQSKK G FAEQGNM GA+NYLSKNAK KSKI NG P+RNPAGKF+EENYPS SD+L GGHDDWRQLYKSKN+++R EPV+RFD+PSS +YAAEHK KGR GLDHS +RSKYLHDYGNDE++SLENRLL  DENGVG  RFWRKGQKNVA+KD+ +ERS+ PLLGCNS MKKRKMK GAAD   RDEDANLLS
Sbjct:  618 TQSKKIGGFAEQGNMHGADNYLSKNAK-KSKIFNGSPVRNPAGKFMEENYPSVSDMLNGGHDDWRQLYKSKNDQIRDEPVQRFDMPSSTSYAAEHKKKGRIGLDHSSMRSKYLHDYGNDEDDSLENRLL-ADENGVGQSRFWRKGQKNVAHKDDRDERSEVPLLGCNSAMKKRKMKFGAADFGERDEDANLLS 808          
BLAST of EX571267 vs. TrEMBL
Match: B9GET9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_752211 PE=4 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.414e-17
Identity = 70/192 (36.46%), Postives = 95/192 (49.48%), Query Frame = 3
Query:    6 ITQ-SKKKGSFAEQGNMRGAENYLSKNAKQKSKILNGGPLRNPAGKFIEENYPSGSDILIGGHDDWRQLYKSKNERMRGEPVERFDVPSSIAYAAEHKMKGRAGLDHSILRSKYLHDYGNDEEESLENRLLGGDENGVGHGRFWRKGQKNVAYKDEHNERSDAPLLGCNSTMKKRKMKHGAADSVGRDEDAN 578
            +TQ SKK G F E G M G     S  AKQK K+      R+ + + +E++ P G   L   +D  R     K  ++R E  ER    SS A+ ++ K KG              H++  D+E+ L    L  DEN +G  RF +KGQ    Y    ++RS+A LL CNS  KKRK K+   D  GRDED+N
Sbjct:  636 VTQFSKKVGGFTESGQMPG----YSSKAKQKGKMQE---TRSSSARVLEDSSPIGLAKLKDDNDRNRVHRFGKIGQLRVESGERSRRTSSKAHPSDRKHKGEVS-----------HEFIVDDEDELLETQLTSDENALG--RFRKKGQSMETYVHGQSDRSEASLLACNSVTKKRKAKYKVMDMAGRDEDSN 807          
BLAST of EX571267 vs. TrEMBL
Match: B9HPP3_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_203922 PE=4 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.121e-14
Identity = 67/188 (35.64%), Postives = 92/188 (48.94%), Query Frame = 3
Query:   15 SKKKGSFAEQGNMRGAENYLSKNAKQKSKILNGGPLRNPAGKFIEENYPSGSDILIGGHDDWRQLYKSKNERMRGEPVERFDVPSSIAYAAEHKMKGRAGLDHSILRSKYLHDYGNDEEESLENRLLGGDENGVGHGRFWRKGQKNVAYKDEHNERSDAPLLGCNSTMKKRKMKHGAADSVGRDEDAN 578
            SKK   F E G M     YLSK AKQ  K+       + + + +E++  +G   L   +D  R     K  ++R E  ER    SS AY ++ K KG    D  +          +DE++ LE +LL  DEN +   R  +KG+    Y    ++R +A LLGCNS MKKRK K+   D  GRDED N
Sbjct:  613 SKKVSGFTEPGQM---PRYLSK-AKQMGKMHE---THSSSARVLEDSSLTGLGKLKDDNDRNRIHRSGKIGQLRVESGERLHRSSSKAYPSDRKQKGEVSHDFIV----------DDEDDLLETQLLS-DENALV--RLRKKGRNMETYAHGQSDRPEALLLGCNSGMKKRKAKYDVMDMAGRDEDGN 780          
BLAST of EX571267 vs. TrEMBL
Match: B9T3J5_RICCO (Nfrkb, putative OS=Ricinus communis GN=RCOM_1264030 PE=4 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.052e-12
Identity = 65/190 (34.21%), Postives = 86/190 (45.26%), Query Frame = 3
Query:   15 SKKKGSFAEQGNMRGAENYLSKNAKQKSKILNGGPLRNPAGKFIEENYPSGSDILIGGHDDWRQLYKSKNERMRGEPVERFDVPSSIAYAAEHKMKGRAGLDHSILRSKYLHDYGNDEEE-SLENRLLGGDENGVGHGRFWRKGQKNVAYKDEHNERSDAPLLGCNSTMKKRKMKHGAADSVGRDEDANL 581
            SKK   F E G++       S  AKQK K+ +  PL +   + +E + P         +D  R     KN ++R E  E   + S  AY ++ K K               HDY  DEE+ SLE RLL  DEN +   RF +KGQ +  Y     +RSDA  +G +S  KKRK      D  GRD   NL
Sbjct:  673 SKKVAGFNELGDIPE----YSLKAKQKGKMRDSSPLHSSGIRVVENSSPLVLGKAKDDNDRNRSRKLGKNGQLR-ESGESLYMTSVKAYPSDGKQKREVS-----------HDYAIDEEDDSLETRLLA-DENALS--RFGKKGQDSEVYVHNRRDRSDAAFVGLSSMAKKRKANQDLTDVDGRDGGGNL 843          
The following BLAST results are available for this feature:
BLAST of EX571267 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
Q2HU34_MEDTR4.316e-8378.76Nuclear factor related to kappa-B-binding protein ... [more]
B9GET9_POPTR1.414e-1736.46Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9HPP3_POPTR1.121e-1435.64Predicted protein (Fragment) OS=Populus trichocarp... [more]
B9T3J5_RICCO3.052e-1234.21Nfrkb, putative OS=Ricinus communis GN=RCOM_126403... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 6..17
score
NoneNo IPR availableSEGsegsegcoord: 58..78
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX571267 ID=EX571267; Name=EX571267; organism=Pisum sativum; type=EST; length=589bp
ATGTTATAACACAATCGAAAAAGAAAGGCAGCTTTGCAGAGCAGGGGAAC
ATGCGTGGAGCAGAAAATTACCTTTCAAAAAATGCAAAGCAGAAGAGTAA
AATACTCAACGGTGGTCCTTTGCGTAACCCTGCTGGTAAATTCATTGAAG
AGAACTATCCCTCAGGATCAGATATACTAATTGGTGGTCATGATGACTGG
AGACAATTGTATAAAAGCAAGAATGAACGAATGCGAGGGGAACCTGTTGA
AAGGTTTGACGTGCCATCATCAATTGCATATGCTGCTGAACATAAGATGA
AAGGGAGAGCTGGCCTTGATCATTCTATTTTGAGGTCAAAATATTTACAT
GATTATGGCAATGATGAGGAAGAATCACTGGAAAATCGGTTGCTAGGGGG
GGATGAAAATGGAGTTGGACATGGCAGGTTTTGGAGAAAAGGGCAGAAAA
ATGTTGCATATAAGGATGAGCATAATGAAAGATCTGACGCACCATTACTT
GGTTGTAACTCAACAATGAAGAAGCGAAAAATGAAGCATGGTGCAGCAGA
TTCTGTTGGAAGAGATGAAGATGCCAATCTTCTGTCAAC
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