FG528850

EST Overview
NameFG528850
Unique NameFG528850
TypeEST
OrganismPisum sativum (pea)
Sequence length619
Libraries
Library NameType
LIBEST_023214 MeriC Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v2Pisum sativum unigene v2EST
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Pisum sativum unigene v22011-03-01
Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins2011-04-21
InterProScan analysis for Pisum sativum unigene v22011-04-27
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
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BLAST of FG528850 vs. Medicago proteins
Match: IMGA|Medtr5g089680.1 (Unknown Protein (AHRD V1) chr05_pseudomolecule_IMGAG_V3.5 37946872-37947461 E EGN_Mt100125 20100825)

HSP 1 Score: 51.9878 bits (123), Expect = 2.632e-7
Identity = 32/88 (36.36%), Postives = 46/88 (52.27%), Query Frame = -2 
Query:   40 KLNLDVCLDVKGK*GIEDIFKNENGDSMAACTQFVDEEENLLLMEAVAFNIGINVAKDCCILKVHFESDNETLVKILNGEKDNRTTTR 303
            K N D  L VKG  G+  I +NENG  MA+    +   E ++L EA +    + +A DC   ++ FE DNE + + L   KDN+   R
Sbjct:   38 KANCDANLQVKGWWGLGSIIRNENGLVMASAAWKIKGTEEVILAEAFSLLSTVRLAIDCGFRQMIFEGDNEKVFRTL---KDNKIEDR 122
[Close]
BLAST of FG528850 vs. Medicago proteins
Match: IMGA|Medtr3g090420.1 (Unknown Protein (AHRD V1) chr03_pseudomolecule_IMGAG_V3.5 30502323-30503079 H EGN_Mt100125 20100825)

HSP 1 Score: 50.447 bits (119), Expect = 7.657e-7
Identity = 30/97 (30.93%), Postives = 54/97 (55.67%), Query Frame = -2 
Query:   16 KLNLDVCLDVKGK*GIEDIFKNENGDSMAACTQFVDEEENLLLMEAVAFNIGINVAKDCCILKVHFESDNETLVKILNGE-KDNRTTTRLMVMAMKR 303
            K N + CL ++G  GI  + ++ NG +MAA T  +   +++ L EA    + + +A+DC   +V FE DNE +  +   E K+NR+    ++  ++R
Sbjct:   86 KANSNTCLQLQGWWGIGAVVRDSNGLAMAATTWKIPGSDSVELAEAYGLLLTMRLARDCGFREVIFEGDNERIWNMACYENKENRSYLGSVIQEIQR 182
The following BLAST results are available for this feature:
BLAST of FG528850 vs. Medicago proteins
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins)
Total hits: 2
Match NameE-valueIdentityDescription
IMGA|Medtr5g089680.12.632e-736.36Unknown Protein (AHRD V1) chr05_pseudomolecule_IMG... [more]
IMGA|Medtr3g090420.17.657e-730.93Unknown Protein (AHRD V1) chr03_pseudomolecule_IMG... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v2
Date Performed: 2011-04-27
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 38..53
score

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 38..53
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v2
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG528850 ID=FG528850; Name=FG528850; organism=Pisum sativum; type=EST; length=619bp
AAATCAATTAAGCTTCCTTTTCATAGCCATCACCATTAATCTCGTCGTCG
TTCTGTTATCCTTCTCGCCGTTTAGAATTTTAACTAGTGTTTCATTATCG
GATTCGAAATGAACCTTAAGGATACAACAATCCTTAGCAACATTAATACC
AATATTAAACGCCACCGCCTCCATTAATAAAAGATTCTCTTCCTCATCCA
CGAATTGAGTACAAGCTGCCATAGAGTCACCATTTTCATTTTTGAAAATA
TCTTCAATCCCCTATTTACCCTTCACATCTAAGCACACATCCAGATTCAG
CTTCTGATTCACCCTACTCATATCTTTTATACCATTCTCCTTCAGAATCG
AAACTATGTGATCCTTGGTATTATTGCTGCTAACTTCCCCTTTTTTATGC
ATGTTGGTCACCTCCATGATGCTTCAAGCATTGATCATCTTATCTCTACA
AGGTATGCTATTAACCTTATATAAGTTATTAATATTATTTTTATAGTTCA
AATTAACATGACTTTTGCCCTTATCAGTTTTATGTGGCTTGTGAGTTATA
ATATGACTTTGACACTGGATCTTGGTATTATCATTGTTCCAATAGTCTTC
TTTATTAGCTATAACATCG
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