FG529097

EST Overview


Name	FG529097
Unique Name	FG529097
Type	EST
Organism	Pisum sativum (pea)
Sequence length	637

Libraries


Library Name	Type
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTs	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

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BLAST of FG529097 vs. TrEMBL
Match: C6TNJ2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 9.118e-43
Identity = 81/87 (93.10%), Postives = 86/87 (98.85%), Query Frame = 3

Query:   33 RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFKNPWARSYIRVKKYE 293
            RFG+SRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFG+VDYTNYDDMKYAIRKLDD EF+NPWAR+YIRV+KYE
Sbjct:  107 RFGISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDAEFRNPWARAYIRVRKYE 193

[Close]

BLAST of FG529097 vs. TrEMBL
Match: Q9CA06_ARATH (Putative splicing factor; 53460-55514 OS=Arabidopsis thaliana GN=T1G12.13 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.525e-42
Identity = 80/87 (91.95%), Postives = 86/87 (98.85%), Query Frame = 3

Query:   33 RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFKNPWARSYIRVKKYE 293
            RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNYDDMKYAIRKLDDTEF+NPWAR +IRVKKYE
Sbjct:  113 RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVKKYE 199

[Close]

BLAST of FG529097 vs. TrEMBL
Match: D7LSI2_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_906222 PE=4 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.525e-42
Identity = 80/87 (91.95%), Postives = 86/87 (98.85%), Query Frame = 3

Query:   33 RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFKNPWARSYIRVKKYE 293
            RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNYDDMKYAIRKLDDTEF+NPWAR +IRVKKYE
Sbjct:  114 RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVKKYE 200

[Close]

BLAST of FG529097 vs. TrEMBL
Match: A8MR30_ARATH (Uncharacterized protein At3g49430.2 OS=Arabidopsis thaliana GN=At3g49430 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.525e-42
Identity = 80/87 (91.95%), Postives = 86/87 (98.85%), Query Frame = 3

Query:   33 RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFKNPWARSYIRVKKYE 293
            RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNYDDMKYAIRKLDDTEF+NPWAR +IRVKKYE
Sbjct:  113 RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVKKYE 199

[Close]

BLAST of FG529097 vs. TrEMBL
Match: A2RVS6_ARATH (At3g49430 OS=Arabidopsis thaliana GN=At3g49430 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.525e-42
Identity = 80/87 (91.95%), Postives = 86/87 (98.85%), Query Frame = 3

Query:   33 RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFKNPWARSYIRVKKYE 293
            RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNYDDMKYAIRKLDDTEF+NPWAR +IRVKKYE
Sbjct:  113 RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVKKYE 199

[Close]

BLAST of FG529097 vs. TrEMBL
Match: C6TA73_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.008e-41
Identity = 80/87 (91.95%), Postives = 85/87 (97.70%), Query Frame = 3

Query:   33 RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFKNPWARSYIRVKKYE 293
            RFG+SRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGT G+VDYTNYDDMKYAIRKLDDTEF+NPWA +YIRV+KYE
Sbjct:  107 RFGISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTLGIVDYTNYDDMKYAIRKLDDTEFRNPWAIAYIRVRKYE 193

[Close]

BLAST of FG529097 vs. TrEMBL
Match: B9IDH4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_902624 PE=4 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.831e-41
Identity = 78/87 (89.66%), Postives = 87/87 (100.00%), Query Frame = 3

Query:   33 RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFKNPWARSYIRVKKYE 293
            RFG+SRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDS+GTFG+VDYTN++DMKYAIRKLDDTEF+NPWAR+YIRVK++E
Sbjct:  104 RFGISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSDGTFGVVDYTNHEDMKYAIRKLDDTEFRNPWARAYIRVKQHE 190

[Close]

BLAST of FG529097 vs. TrEMBL
Match: B9S1M8_RICCO (Arginine/serine-rich splicing factor, putative OS=Ricinus communis GN=RCOM_0866580 PE=4 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.534e-41
Identity = 78/87 (89.66%), Postives = 85/87 (97.70%), Query Frame = 3

Query:   33 RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFKNPWARSYIRVKKYE 293
            R+ +SRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDS+GTFG+VDYTNY+DMKYAIRKLDDTEF+NPWAR+YIRVK YE
Sbjct:  108 RYCISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSDGTFGIVDYTNYEDMKYAIRKLDDTEFRNPWARAYIRVKMYE 194

[Close]

BLAST of FG529097 vs. TrEMBL
Match: B9I218_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1095123 PE=4 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.243e-40
Identity = 77/87 (88.51%), Postives = 84/87 (96.55%), Query Frame = 3

Query:   33 RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFKNPWARSYIRVKKYE 293
            R G+SRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RD +GT GLVDYTN++DMKYAIRKLDDTEFKNPWAR+YIRVK+YE
Sbjct:  115 RLGISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDGDGTLGLVDYTNHEDMKYAIRKLDDTEFKNPWARAYIRVKQYE 201

[Close]

BLAST of FG529097 vs. TrEMBL
Match: Q3HRY5_SOLTU (Pre-mRNA splicing factor-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.235e-40
Identity = 75/87 (86.21%), Postives = 85/87 (97.70%), Query Frame = 3

Query:   33 RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFKNPWARSYIRVKKYE 293
            R G+SRHS++RVI+RGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNY+DMKYAIRKLDDTEF+NPW R+YIRV++Y+
Sbjct:  108 RHGISRHSDYRVIIRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFRNPWTRTYIRVREYK 194

[Close]

BLAST of FG529097 vs. SwissProt
Match: SFRS1_ARATH (Pre-mRNA-splicing factor SF2 OS=Arabidopsis thaliana GN=SF2 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.054e-31
Identity = 59/85 (69.41%), Postives = 74/85 (87.06%), Query Frame = 3

Query:   39 GVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFKNPWARSYIRVKKYE 293
            G SR SEFRV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT G+VDYT Y+DMKYA++KLDDTEF+N ++  Y+RV++Y+
Sbjct:  112 GPSRRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREYD 196

[Close]

BLAST of FG529097 vs. SwissProt
Match: RSP3_CAEEL (Probable splicing factor, arginine/serine-rich 3 OS=Caenorhabditis elegans GN=rsp-3 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.289e-20
Identity = 49/84 (58.33%), Postives = 67/84 (79.76%), Query Frame = 3

Query:   39 GVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFK-NPWARSYIRVKK 287
            G  R + +RVIV GLP + SWQDLKDHMR AGDVC+A+V+RD  GT G+V++T Y+D+KYA+RKLDDT+F+ +    +YIRV++
Sbjct:  116 GPQRRTGYRVIVEGLPPTGSWQDLKDHMRDAGDVCYADVARD--GT-GVVEFTRYEDVKYAVRKLDDTKFRSHEGETAYIRVRE 196

[Close]

BLAST of FG529097 vs. SwissProt
Match: SFRS9_RAT (Splicing factor, arginine/serine-rich 9 OS=Rattus norvegicus GN=Sfrs9 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.396e-20
Identity = 47/80 (58.75%), Postives = 62/80 (77.50%), Query Frame = 3

Query:   45 SRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFK-NPWARSYIRV 281
            +R S+FRV+V GLP S SWQDLKDHMR+AGDVC+A+V +D     G+V+Y   +DM+YA+RKLDDT+F+ +    SYIRV
Sbjct:  106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182

[Close]

BLAST of FG529097 vs. SwissProt
Match: SFRS9_MOUSE (Splicing factor, arginine/serine-rich 9 OS=Mus musculus GN=Sfrs9 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.396e-20
Identity = 47/80 (58.75%), Postives = 62/80 (77.50%), Query Frame = 3

Query:   45 SRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFK-NPWARSYIRV 281
            +R S+FRV+V GLP S SWQDLKDHMR+AGDVC+A+V +D     G+V+Y   +DM+YA+RKLDDT+F+ +    SYIRV
Sbjct:  107 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 183

[Close]

BLAST of FG529097 vs. SwissProt
Match: SFRS9_HUMAN (Splicing factor, arginine/serine-rich 9 OS=Homo sapiens GN=SFRS9 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.353e-20
Identity = 47/80 (58.75%), Postives = 62/80 (77.50%), Query Frame = 3

Query:   45 SRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFK-NPWARSYIRV 281
            +R S+FRV+V GLP S SWQDLKDHMR+AGDVC+A+V +D     G+V+Y   +DM+YA+RKLDDT+F+ +    SYIRV
Sbjct:  106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---VGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182

[Close]

BLAST of FG529097 vs. SwissProt
Match: SFRS1_CHICK (Splicing factor, arginine/serine-rich 1 OS=Gallus gallus GN=SFRS1 PE=1 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 1.091e-19
Identity = 50/81 (61.73%), Postives = 64/81 (79.01%), Query Frame = 3

Query:   45 SRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFK-NPWARSYIRVK 284
            SR SE+RVIV GLP S SWQDLKDHMR+AGDVC+A+V RD  GT G+V++   +DM YA+RKLD+T+F+ +    +YIRVK
Sbjct:  116 SRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRD--GT-GVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193

[Close]

BLAST of FG529097 vs. SwissProt
Match: SFR1B_DANRE (Splicing factor, arginine/serine-rich 1B OS=Danio rerio GN=sfrs1b PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.091e-19
Identity = 50/81 (61.73%), Postives = 64/81 (79.01%), Query Frame = 3

Query:   45 SRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFK-NPWARSYIRVK 284
            SR SE+RVIV GLP S SWQDLKDHMR+AGDVC+A+V RD  GT G+V++   +DM YA+RKLD+T+F+ +    +YIRVK
Sbjct:  115 SRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRD--GT-GVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 192

[Close]

BLAST of FG529097 vs. SwissProt
Match: SFR1A_DANRE (Splicing factor, arginine/serine-rich 1A OS=Danio rerio GN=sfrs1a PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.091e-19
Identity = 50/81 (61.73%), Postives = 64/81 (79.01%), Query Frame = 3

Query:   45 SRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFK-NPWARSYIRVK 284
            SR SE+RVIV GLP S SWQDLKDHMR+AGDVC+A+V RD  GT G+V++   +DM YA+RKLD+T+F+ +    +YIRVK
Sbjct:  125 SRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRD--GT-GVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 202

[Close]

BLAST of FG529097 vs. SwissProt
Match: SFRS1_XENTR (Splicing factor, arginine/serine-rich 1 OS=Xenopus tropicalis GN=sfrs1 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.425e-19
Identity = 49/81 (60.49%), Postives = 64/81 (79.01%), Query Frame = 3

Query:   45 SRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFK-NPWARSYIRVK 284
            SR SE+RV+V GLP S SWQDLKDHMR+AGDVC+A+V RD  GT G+V++   +DM YA+RKLD+T+F+ +    +YIRVK
Sbjct:  135 SRRSEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRD--GT-GVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 212

[Close]

BLAST of FG529097 vs. SwissProt
Match: SFRS1_PONAB (Splicing factor, arginine/serine-rich 1 OS=Pongo abelii GN=SFRS1 PE=2 SV=3)

HSP 1 Score: 93.9745 bits (232), Expect = 7.072e-19
Identity = 49/81 (60.49%), Postives = 63/81 (77.78%), Query Frame = 3

Query:   45 SRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFK-NPWARSYIRVK 284
            SR SE RV+V GLP S SWQDLKDHMR+AGDVC+A+V RD  GT G+V++   +DM YA+RKLD+T+F+ +    +YIRVK
Sbjct:  116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193

[Close]

BLAST of FG529097 vs. TAIR peptide
Match: AT3G49430.3 (| Symbols: SRp34a, SR34a, At-SR34a | SER/ARG-rich protein 34A | chr3:18332668-18334829 FORWARD LENGTH=300)

HSP 1 Score: 174.866 bits (442), Expect = 3.245e-44
Identity = 80/87 (91.95%), Postives = 86/87 (98.85%), Query Frame = 3

Query:   33 RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFKNPWARSYIRVKKYE 293
            RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNYDDMKYAIRKLDDTEF+NPWAR +IRVKKYE
Sbjct:  113 RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVKKYE 199

[Close]

BLAST of FG529097 vs. TAIR peptide
Match: AT3G49430.2 (| Symbols: SRp34a, SR34a, At-SR34a | SER/ARG-rich protein 34A | chr3:18332668-18334617 FORWARD LENGTH=297)

HSP 1 Score: 174.866 bits (442), Expect = 3.245e-44
Identity = 80/87 (91.95%), Postives = 86/87 (98.85%), Query Frame = 3

Query:   33 RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFKNPWARSYIRVKKYE 293
            RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNYDDMKYAIRKLDDTEF+NPWAR +IRVKKYE
Sbjct:  113 RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVKKYE 199

[Close]

BLAST of FG529097 vs. TAIR peptide
Match: AT3G49430.1 (| Symbols: SRp34a, SR34a, At-SR34a | SER/ARG-rich protein 34A | chr3:18332668-18334829 FORWARD LENGTH=300)

HSP 1 Score: 174.866 bits (442), Expect = 3.245e-44
Identity = 80/87 (91.95%), Postives = 86/87 (98.85%), Query Frame = 3

Query:   33 RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFKNPWARSYIRVKKYE 293
            RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNYDDMKYAIRKLDDTEF+NPWAR +IRVKKYE
Sbjct:  113 RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVKKYE 199

[Close]

BLAST of FG529097 vs. TAIR peptide
Match: AT1G02840.3 (| Symbols: SR1, ATSRP34, SRP34, SR34, At-SR34 | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:626918-629583 FORWARD LENGTH=303)

HSP 1 Score: 133.65 bits (335), Expect = 8.290e-32
Identity = 59/85 (69.41%), Postives = 74/85 (87.06%), Query Frame = 3

Query:   39 GVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFKNPWARSYIRVKKYE 293
            G SR SEFRV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT G+VDYT Y+DMKYA++KLDDTEF+N ++  Y+RV++Y+
Sbjct:  112 GPSRRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREYD 196

[Close]

BLAST of FG529097 vs. TAIR peptide
Match: AT1G02840.2 (| Symbols: SR1, ATSRP34, SRP34, SR34, At-SR34 | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:626918-628995 FORWARD LENGTH=285)

HSP 1 Score: 133.65 bits (335), Expect = 8.290e-32
Identity = 59/85 (69.41%), Postives = 74/85 (87.06%), Query Frame = 3

Query:   39 GVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFKNPWARSYIRVKKYE 293
            G SR SEFRV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT G+VDYT Y+DMKYA++KLDDTEF+N ++  Y+RV++Y+
Sbjct:  112 GPSRRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREYD 196

[Close]

BLAST of FG529097 vs. TAIR peptide
Match: AT1G02840.1 (| Symbols: SR1, ATSRP34, SRP34, SR34, At-SR34 | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:626918-629583 FORWARD LENGTH=303)

HSP 1 Score: 133.65 bits (335), Expect = 8.290e-32
Identity = 59/85 (69.41%), Postives = 74/85 (87.06%), Query Frame = 3

Query:   39 GVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFKNPWARSYIRVKKYE 293
            G SR SEFRV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT G+VDYT Y+DMKYA++KLDDTEF+N ++  Y+RV++Y+
Sbjct:  112 GPSRRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREYD 196

[Close]

BLAST of FG529097 vs. TAIR peptide
Match: AT1G09140.2 (| Symbols: ATSRP30, SR30, At-SR30 | SERINE-ARGININE PROTEIN 30 | chr1:2943528-2945818 REVERSE LENGTH=256)

HSP 1 Score: 129.028 bits (323), Expect = 2.042e-30
Identity = 59/83 (71.08%), Postives = 72/83 (86.75%), Query Frame = 3

Query:   45 SRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFKNPWARSYIRVKKYE 293
            SR S++RV+V GLP SASWQDLKDHMRKAGDVCF+EV  D +G  G+VDY+NYDDMKYAIRKLD TEF+N ++ +YIRV++YE
Sbjct:  104 SRRSDYRVLVTGLPPSASWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSSAYIRVREYE 186

[Close]

BLAST of FG529097 vs. TAIR peptide
Match: AT1G09140.1 (| Symbols: ATSRP30, SR30, At-SR30 | SERINE-ARGININE PROTEIN 30 | chr1:2942887-2945818 REVERSE LENGTH=268)

HSP 1 Score: 129.028 bits (323), Expect = 2.042e-30
Identity = 59/83 (71.08%), Postives = 72/83 (86.75%), Query Frame = 3

Query:   45 SRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFKNPWARSYIRVKKYE 293
            SR S++RV+V GLP SASWQDLKDHMRKAGDVCF+EV  D +G  G+VDY+NYDDMKYAIRKLD TEF+N ++ +YIRV++YE
Sbjct:  104 SRRSDYRVLVTGLPPSASWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSSAYIRVREYE 186

[Close]

BLAST of FG529097 vs. TAIR peptide
Match: AT4G02430.2 (| Symbols: SR34b, At-SR34b | RNA-binding (RRM/RBD/RNP motifs) family protein | chr4:1069186-1071313 FORWARD LENGTH=278)

HSP 1 Score: 124.02 bits (310), Expect = 6.568e-29
Identity = 56/85 (65.88%), Postives = 71/85 (83.53%), Query Frame = 3

Query:   39 GVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFKNPWARSYIRVKKYE 293
            G SR SE+RV+V GLPSSASWQDLKDHMRK G+VCF++V RD  GT G+VDYT+Y+DMKYA   LDDTEF+N ++  Y+RV++Y+
Sbjct:  113 GPSRRSEYRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYA---LDDTEFRNAFSHEYVRVREYD 194

[Close]

BLAST of FG529097 vs. TAIR peptide
Match: AT4G02430.1 (| Symbols: SR34b, At-SR34b | RNA-binding (RRM/RBD/RNP motifs) family protein | chr4:1069186-1070543 FORWARD LENGTH=178)

HSP 1 Score: 105.916 bits (263), Expect = 1.851e-23
Identity = 47/64 (73.44%), Postives = 56/64 (87.50%), Query Frame = 3

Query:   39 GVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRK 230
            G SR SE+RV+V GLPSSASWQDLKDHMRK G+VCF++V RD  GT G+VDYT+Y+DMKYAI+K
Sbjct:  113 GPSRRSEYRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYAIKK 176

The following BLAST results are available for this feature:

BLAST of FG529097 vs. TrEMBL
BLAST of FG529097 vs. SwissProt
BLAST of FG529097 vs. TAIR peptide

BLAST of FG529097 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6TNJ2_SOYBN	9.118e-43	93.10	Putative uncharacterized protein OS=Glycine max PE...	[more]
Q9CA06_ARATH	4.525e-42	91.95	Putative splicing factor; 53460-55514 OS=Arabidops...	[more]
D7LSI2_ARALY	4.525e-42	91.95	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
A8MR30_ARATH	4.525e-42	91.95	Uncharacterized protein At3g49430.2 OS=Arabidopsis...	[more]
A2RVS6_ARATH	4.525e-42	91.95	At3g49430 OS=Arabidopsis thaliana GN=At3g49430 PE=...	[more]
C6TA73_SOYBN	1.008e-41	91.95	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9IDH4_POPTR	3.831e-41	89.66	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9S1M8_RICCO	8.534e-41	89.66	Arginine/serine-rich splicing factor, putative OS=...	[more]
B9I218_POPTR	3.243e-40	88.51	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q3HRY5_SOLTU	4.235e-40	86.21	Pre-mRNA splicing factor-like protein OS=Solanum t...	[more]

BLAST of FG529097 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
SFRS1_ARATH	8.054e-31	69.41	Pre-mRNA-splicing factor SF2 OS=Arabidopsis thalia...	[more]
RSP3_CAEEL	1.289e-20	58.33	Probable splicing factor, arginine/serine-rich 3 O...	[more]
SFRS9_RAT	6.396e-20	58.75	Splicing factor, arginine/serine-rich 9 OS=Rattus ...	[more]
SFRS9_MOUSE	6.396e-20	58.75	Splicing factor, arginine/serine-rich 9 OS=Mus mus...	[more]
SFRS9_HUMAN	8.353e-20	58.75	Splicing factor, arginine/serine-rich 9 OS=Homo sa...	[more]
SFRS1_CHICK	1.091e-19	61.73	Splicing factor, arginine/serine-rich 1 OS=Gallus ...	[more]
SFR1B_DANRE	1.091e-19	61.73	Splicing factor, arginine/serine-rich 1B OS=Danio ...	[more]
SFR1A_DANRE	1.091e-19	61.73	Splicing factor, arginine/serine-rich 1A OS=Danio ...	[more]
SFRS1_XENTR	1.425e-19	60.49	Splicing factor, arginine/serine-rich 1 OS=Xenopus...	[more]
SFRS1_PONAB	7.072e-19	60.49	Splicing factor, arginine/serine-rich 1 OS=Pongo a...	[more]

BLAST of FG529097 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT3G49430.3	3.245e-44	91.95	\| Symbols: SRp34a, SR34a, At-SR34a \| SER/ARG-rich ...	[more]
AT3G49430.2	3.245e-44	91.95	\| Symbols: SRp34a, SR34a, At-SR34a \| SER/ARG-rich ...	[more]
AT3G49430.1	3.245e-44	91.95	\| Symbols: SRp34a, SR34a, At-SR34a \| SER/ARG-rich ...	[more]
AT1G02840.3	8.290e-32	69.41	\| Symbols: SR1, ATSRP34, SRP34, SR34, At-SR34 \| RN...	[more]
AT1G02840.2	8.290e-32	69.41	\| Symbols: SR1, ATSRP34, SRP34, SR34, At-SR34 \| RN...	[more]
AT1G02840.1	8.290e-32	69.41	\| Symbols: SR1, ATSRP34, SRP34, SR34, At-SR34 \| RN...	[more]
AT1G09140.2	2.042e-30	71.08	\| Symbols: ATSRP30, SR30, At-SR30 \| SERINE-ARGININ...	[more]
AT1G09140.1	2.042e-30	71.08	\| Symbols: ATSRP30, SR30, At-SR30 \| SERINE-ARGININ...	[more]
AT4G02430.2	6.568e-29	65.88	\| Symbols: SR34b, At-SR34b \| RNA-binding (RRM/RBD/...	[more]
AT4G02430.1	1.851e-23	73.44	\| Symbols: SR34b, At-SR34b \| RNA-binding (RRM/RBD/...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 5..19 score: NAcoord: 53..63 score
None	No IPR available	PANTHER	PTHR10548	ARGININE/SERINE-RICH SPLICING FACTOR	coord: 2..161 score: 4.1
None	No IPR available	SEG	seg	seg	coord: 1..10 score: NAcoord: 98..167 score
None	No IPR available	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 12..113 score: 1.4
None	No IPR available	SEG	seg	seg	coord: 50..61 score
None	No IPR available	SEG	seg	seg	coord: 39..59 score: NAcoord: 83..105 score
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 22..84 score: 2.1
IPR000504	RNA recognition motif domain	SMART	SM00360	no description	coord: 21..94 score: 5.6
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 20..98 score: 10
IPR010519	Fruit fly transformer	PFAM	PF06495	Transformer	coord: 94..160 score: 1.2
IPR012677	Nucleotide-binding, alpha-beta plait	GENE3D	3.30.70.330	no description	coord: 17..110 score: 1.3

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FG529097 ID=FG529097; Name=FG529097; organism=Pisum sativum; type=EST; length=637bp
GAGCAGGTGGTGGTGGTGGTGCTGGTGGGGGCCGATTTGGTGTCTCACGC
CATTCTGAATTTCGAGTTATTGTTCGTGGACTCCCATCTTCTGCTTCCTG
GCAAGATTTGAAGGATCATATGAGAAAAGCTGGTGATGTTTGTTTTGCTG
AAGTTTCCCGTGATAGTGAAGGGACTTTTGGCCTTGTTGATTACACTAAT
TATGATGACATGAAATATGCTATTCGGAAACTGGATGACACCGAGTTTAA
AAATCCTTGGGCAAGATCATATATTCGGGTGAAGAAGTATGAGAGCAGTC
GTTCCAGGAGCCGCAGCAGAAGCCCCAGCAGGAGCAGAAGTCCAAAAAGG
GCTAAAAGTAGATCTTTGGAGCGATCTGTGTCCAGGTCACGATCTATTTC
TAGATCCAGATCAGCATCACCAATCAAGGCTTCAAGGCCACGATCACGAT
CACGTTCACCCTCCCGTTCCGTATCTCCAAGATCACCGCCCAAGGTTCTG
TCAGGGGATGTTTGATATTTATATGAATGGTGATCTCCAAAGTTCCAGCA
CACTTCTGGAAAATATTGGTGCAATGTTTGAGTTGATTTGAATTGTTTAA
TGGATGATTATTATACCAGAGTTATTTTCATGGTTAT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006397	mRNA processing
GO:0046660	female sex differentiation

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR010519	Fruit fly transformer
IPR012677	Nucleotide-bd_a/b_plait_sf

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