FG536116

EST Overview
NameFG536116
Unique NameFG536116
TypeEST
OrganismPisum sativum (pea)
Sequence length424
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v2Pisum sativum unigene v2EST
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Pisum sativum unigene v22011-03-01
Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides2011-04-21
Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins2011-04-21
Homology
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BLAST of FG536116 vs. Soybean peptides
Match: Glyma03g02510.1|PACid:16250892 ()

HSP 1 Score: 64.6994 bits (156), Expect = 3.120e-11
Identity = 28/44 (63.64%), Postives = 35/44 (79.55%), Query Frame = 2 
Query:    2 MHGFSSGDKSHPESETICRMAESLGLQIIFSKQSRVEEGDWSRE 133
            +HGFSSGDKSHPESE IC++AE LGLQ+   K++R  EG+W  E
Sbjct:  728 LHGFSSGDKSHPESENICKIAEFLGLQMKILKENREREGEWYNE 771
[Close]
BLAST of FG536116 vs. Medicago proteins
Match: IMGA|Medtr8g035960.1 (Pentatricopeptide repeat-containing protein At4g32430, mitochondrial (AHRD V1 ***- Q84MA3); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat chr08_pseudomolecule_IMGAG_V3.5 8213182-8215557 H EGN_Mt100125 20100825)

HSP 1 Score: 83.9593 bits (206), Expect = 3.015e-17
Identity = 40/51 (78.43%), Postives = 44/51 (86.27%), Query Frame = 2 
Query:    2 MHGFSSGDKSHPESETICRMAESLGLQIIFSKQSRVEEGDWSREFELMSHG 154
            +HGFSSGDKSHPESETI RMAE LGLQ+IFSK+S    GDW REFEL+SHG
Sbjct:  741 LHGFSSGDKSHPESETIDRMAEFLGLQMIFSKESGGTGGDWHREFELVSHG 791
[Close]
BLAST of FG536116 vs. Medicago proteins
Match: IMGA|AC225458_84.1 (Pentatricopeptide repeat-containing protein At4g32430, mitochondrial (AHRD V1 ***- Q84MA3); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat AC225458.11 291147-288772 H EGN_Mt100125 20100825)

HSP 1 Score: 83.9593 bits (206), Expect = 3.015e-17
Identity = 40/51 (78.43%), Postives = 44/51 (86.27%), Query Frame = 2 
Query:    2 MHGFSSGDKSHPESETICRMAESLGLQIIFSKQSRVEEGDWSREFELMSHG 154
            +HGFSSGDKSHPESETI RMAE LGLQ+IFSK+S    GDW REFEL+SHG
Sbjct:  741 LHGFSSGDKSHPESETIDRMAEFLGLQMIFSKESGGTGGDWHREFELVSHG 791
[Close]
BLAST of FG536116 vs. Medicago proteins
Match: IMGA|AC233070_1021.1 (Pentatricopeptide repeat-containing protein At4g32430, mitochondrial (AHRD V1 ***- Q84MA3); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat AC233070.6 106197-108572 H EGN_Mt100125 20100825)

HSP 1 Score: 83.9593 bits (206), Expect = 3.015e-17
Identity = 40/51 (78.43%), Postives = 44/51 (86.27%), Query Frame = 2 
Query:    2 MHGFSSGDKSHPESETICRMAESLGLQIIFSKQSRVEEGDWSREFELMSHG 154
            +HGFSSGDKSHPESETI RMAE LGLQ+IFSK+S    GDW REFEL+SHG
Sbjct:  741 LHGFSSGDKSHPESETIDRMAEFLGLQMIFSKESGGTGGDWHREFELVSHG 791
The following BLAST results are available for this feature:
BLAST of FG536116 vs. Soybean peptides
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides)
Total hits: 1
Match NameE-valueIdentityDescription
Glyma03g02510.1|PACid:162508923.120e-1163.64[more]
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BLAST of FG536116 vs. Medicago proteins
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins)
Total hits: 3
Match NameE-valueIdentityDescription
IMGA|Medtr8g035960.13.015e-1778.43Pentatricopeptide repeat-containing protein At4g32... [more]
IMGA|AC225458_84.13.015e-1778.43Pentatricopeptide repeat-containing protein At4g32... [more]
IMGA|AC233070_1021.13.015e-1778.43Pentatricopeptide repeat-containing protein At4g32... [more]
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Properties
Property NameValue
Singlet in analysisPisum sativum unigene v2
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG536116 ID=FG536116; Name=FG536116; organism=Pisum sativum; type=EST; length=424bp
TATGCATGGTTTCTCATCTGGGGATAAGTCACACCCAGAGTCTGAGACTA
TTTGTAGAATGGCAGAGTCTTTGGGATTGCAAATAATATTTTCCAAACAG
AGTAGAGTGGAGGAAGGTGATTGGTCTCGAGAGTTTGAACTGATGAGTCA
TGGATAGCTTACTTGATCGTGCTCGTTCAAAAAGAAACTAATGTGTGCTC
ATTCAAAAGAGAGTATGGGAAAGAGGATGGGTACTTTGTTGAAAGAGTTC
CTTCAAAGCCCTTATCTTTTACATTTTGGAGTTTCCCCCAAATTGAGGGG
GTTATTATGGTTGTGTAGCTTCACTTCATTCGACTACCAAAATTGCAACT
TTGCAATTTAGCTCAAAGTTGTAAACCCCAACTTCTTTCCCCACTCTCTG
ACCGGTCTTTTTCTCTCTCGAGTT
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