FG536927

EST Overview
NameFG536927
Unique NameFG536927
TypeEST
OrganismPisum sativum (pea)
Sequence length507
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of FG536927 vs. TrEMBL
Match: B9I832_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_570914 PE=4 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 5.236e-53
Identity = 105/115 (91.30%), Postives = 113/115 (98.26%), Query Frame = 2
Query:    2 KHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACIAIDRILAERAVEADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDLKVYLD 346
            KH+SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVL+SRSDIPAC+A+ +ILA+RA EADVYTASYTPRERDKFEGKIRAVVQSLIDNGID+K+YLD
Sbjct:   73 KHLSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLKSRSDIPACLAVGQILADRAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKIYLD 187          
BLAST of FG536927 vs. TrEMBL
Match: B9T8N7_RICCO (Structural constituent of ribosome, putative OS=Ricinus communis GN=RCOM_0084540 PE=4 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 6.839e-53
Identity = 107/115 (93.04%), Postives = 111/115 (96.52%), Query Frame = 2
Query:    2 KHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACIAIDRILAERAVEADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDLKVYLD 346
            KH+SFKQRT AYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKA LRSRSDIPAC+AI RIL+ERA EADVYTASYTPRERDKFEGKIRAVVQSLIDNGID+KVYLD
Sbjct:   74 KHMSFKQRTKAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAALRSRSDIPACLAIGRILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLD 188          
BLAST of FG536927 vs. TrEMBL
Match: D7TUX5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_30.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021982001 PE=4 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 4.433e-52
Identity = 106/115 (92.17%), Postives = 111/115 (96.52%), Query Frame = 2
Query:    2 KHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACIAIDRILAERAVEADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDLKVYLD 346
            KHISFKQRT AYMEPFTLDV ISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVL+SRSDIPAC+AI RIL+ERA EADVYTASYTPR+RDKFEGKIRAVVQSLIDNGID+KVYLD
Sbjct:   73 KHISFKQRTGAYMEPFTLDVLISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLKSRSDIPACLAIGRILSERAREADVYTASYTPRDRDKFEGKIRAVVQSLIDNGIDVKVYLD 187          
BLAST of FG536927 vs. TrEMBL
Match: A9NZ46_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 1.684e-51
Identity = 102/115 (88.70%), Postives = 111/115 (96.52%), Query Frame = 2
Query:    2 KHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACIAIDRILAERAVEADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDLKVYLD 346
            KH+SFKQRT+AYM+PFTLDVFISKRFVSAS+THRVTSKQVAVAGTNSKDIKA LRS+SDIPAC+AI RILAER+ EADVYTA YTPRERDKFEGKIRAVVQSLIDNGID+KVYL+
Sbjct:   72 KHVSFKQRTIAYMQPFTLDVFISKRFVSASITHRVTSKQVAVAGTNSKDIKAALRSKSDIPACLAIGRILAERSREADVYTAVYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLN 186          
BLAST of FG536927 vs. TrEMBL
Match: Q8GW22_ARATH (At1g08850 OS=Arabidopsis thaliana GN=At1g08845 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 2.873e-51
Identity = 101/115 (87.83%), Postives = 111/115 (96.52%), Query Frame = 2
Query:    2 KHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACIAIDRILAERAVEADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDLKVYLD 346
            KH+SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVT +QVAVAGTNSKD+KAVLRSR DIPAC++I RIL+ERA EADVYTASYTPR++DKFEGKIRAVVQSLIDNGID+K+YLD
Sbjct:   75 KHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTNSKDVKAVLRSRCDIPACMSIGRILSERAKEADVYTASYTPRDQDKFEGKIRAVVQSLIDNGIDVKIYLD 189          
BLAST of FG536927 vs. TrEMBL
Match: D7KIV9_ARALY (Structural constituent of ribosome OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_470958 PE=4 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 8.360e-51
Identity = 100/115 (86.96%), Postives = 111/115 (96.52%), Query Frame = 2
Query:    2 KHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACIAIDRILAERAVEADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDLKVYLD 346
            KH+SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVT +QVAVAGTNSKD+KAVLRSR DIPAC++I RIL+ERA EADVYTASYTPR+++KFEGKIRAVVQSLIDNGID+K+YLD
Sbjct:   75 KHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTNSKDVKAVLRSRCDIPACMSIGRILSERAKEADVYTASYTPRDQEKFEGKIRAVVQSLIDNGIDVKIYLD 189          
BLAST of FG536927 vs. TrEMBL
Match: Q8SB98_ORYSA (Putative uncharacterized protein OSJNBa0042H09.18 OS=Oryza sativa GN=OSJNBa0042H09.18 PE=4 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 1.862e-50
Identity = 100/115 (86.96%), Postives = 108/115 (93.91%), Query Frame = 2
Query:    2 KHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACIAIDRILAERAVEADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDLKVYLD 346
            KHISFKQRT+AYMEPFTLDVFISKRFVSASLTHR T +QVAVAGTNSKDIKA L+SRSDIPAC+A+ R LAERA EADVYT +YTPRERDKFEGKIRAVVQSLIDNGI++KVYLD
Sbjct:   73 KHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRTTCRQVAVAGTNSKDIKAALKSRSDIPACLAVGRFLAERAKEADVYTCTYTPRERDKFEGKIRAVVQSLIDNGINVKVYLD 187          
BLAST of FG536927 vs. TrEMBL
Match: Q7XC72_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=Os10g0559900 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 1.862e-50
Identity = 100/115 (86.96%), Postives = 108/115 (93.91%), Query Frame = 2
Query:    2 KHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACIAIDRILAERAVEADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDLKVYLD 346
            KHISFKQRT+AYMEPFTLDVFISKRFVSASLTHR T +QVAVAGTNSKDIKA L+SRSDIPAC+A+ R LAERA EADVYT +YTPRERDKFEGKIRAVVQSLIDNGI++KVYLD
Sbjct:   73 KHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRTTCRQVAVAGTNSKDIKAALKSRSDIPACLAVGRFLAERAKEADVYTCTYTPRERDKFEGKIRAVVQSLIDNGINVKVYLD 187          
BLAST of FG536927 vs. TrEMBL
Match: A2ZA70_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34632 PE=4 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 1.862e-50
Identity = 100/115 (86.96%), Postives = 108/115 (93.91%), Query Frame = 2
Query:    2 KHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACIAIDRILAERAVEADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDLKVYLD 346
            KHISFKQRT+AYMEPFTLDVFISKRFVSASLTHR T +QVAVAGTNSKDIKA L+SRSDIPAC+A+ R LAERA EADVYT +YTPRERDKFEGKIRAVVQSLIDNGI++KVYLD
Sbjct:   73 KHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRTTCRQVAVAGTNSKDIKAALKSRSDIPACLAVGRFLAERAKEADVYTCTYTPRERDKFEGKIRAVVQSLIDNGINVKVYLD 187          
BLAST of FG536927 vs. TrEMBL
Match: C5WSC9_SORBI (Putative uncharacterized protein Sb01g029100 OS=Sorghum bicolor GN=Sb01g029100 PE=4 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 7.077e-50
Identity = 99/115 (86.09%), Postives = 109/115 (94.78%), Query Frame = 2
Query:    2 KHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACIAIDRILAERAVEADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDLKVYLD 346
            KHISFKQRT+AYMEPFTLDVFISKRFVSASLTHR T +QVAVAGTNSKDIKAVL+SRSDIPAC+A+ R LAERA EADV+T +YTPRERDKFEGKIRAVVQSLIDNGI++K+YLD
Sbjct:   73 KHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRSTCRQVAVAGTNSKDIKAVLKSRSDIPACLAVGRFLAERAKEADVFTCTYTPRERDKFEGKIRAVVQSLIDNGINVKLYLD 187          
BLAST of FG536927 vs. TAIR peptide
Match: AT1G08845.2 (| Symbols: | Ribosomal L18p/L5e family protein | chr1:2838789-2840955 FORWARD LENGTH=234)

HSP 1 Score: 204.527 bits (519), Expect = 2.518e-53
Identity = 101/115 (87.83%), Postives = 111/115 (96.52%), Query Frame = 2
Query:    2 KHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACIAIDRILAERAVEADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDLKVYLD 346
            KH+SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVT +QVAVAGTNSKD+KAVLRSR DIPAC++I RIL+ERA EADVYTASYTPR++DKFEGKIRAVVQSLIDNGID+K+YLD
Sbjct:  120 KHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTNSKDVKAVLRSRCDIPACMSIGRILSERAKEADVYTASYTPRDQDKFEGKIRAVVQSLIDNGIDVKIYLD 234          
BLAST of FG536927 vs. TAIR peptide
Match: AT1G08845.1 (| Symbols: | Ribosomal L18p/L5e family protein | chr1:2839855-2840955 FORWARD LENGTH=189)

HSP 1 Score: 204.527 bits (519), Expect = 2.518e-53
Identity = 101/115 (87.83%), Postives = 111/115 (96.52%), Query Frame = 2
Query:    2 KHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACIAIDRILAERAVEADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDLKVYLD 346
            KH+SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVT +QVAVAGTNSKD+KAVLRSR DIPAC++I RIL+ERA EADVYTASYTPR++DKFEGKIRAVVQSLIDNGID+K+YLD
Sbjct:   75 KHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTNSKDVKAVLRSRCDIPACMSIGRILSERAKEADVYTASYTPRDQDKFEGKIRAVVQSLIDNGIDVKIYLD 189          
BLAST of FG536927 vs. TAIR peptide
Match: AT3G22450.1 (| Symbols: | Ribosomal L18p/L5e family protein | chr3:7962443-7963378 FORWARD LENGTH=311)

HSP 1 Score: 111.694 bits (278), Expect = 2.221e-25
Identity = 55/111 (49.55%), Postives = 79/111 (71.17%), Query Frame = 2
Query:   11 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACIAIDRILAERAVEADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDLKVYL 343
            +F Q T  +  PF LD++ISK  V A + HRVTSK V VA + SKD+K  L SR ++ AC A+  +LA+R++E D++   YTPR+ DK EGK++ V+Q+LIDNG+++KV L
Sbjct:  186 TFNQLTAPFHYPFCLDIYISKESVRACVIHRVTSKVVTVAHSISKDMKFDLGSRRNVAACAAVGAVLAQRSLEDDIHDVIYTPRKGDKIEGKLQVVLQALIDNGVNVKVKL 296          
BLAST of FG536927 vs. TAIR peptide
Match: AT3G20230.1 (| Symbols: | Ribosomal L18p/L5e family protein | chr3:7055639-7056679 REVERSE LENGTH=187)

HSP 1 Score: 103.99 bits (258), Expect = 4.631e-23
Identity = 49/105 (46.67%), Postives = 75/105 (71.43%), Query Frame = 2
Query:   11 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACIAIDRILAERAVEADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 325
            S+KQRT  YM PF L+VF S++F+ A + HR TSK ++VA TN++DI+  + S  D  AC  I +++AER++EADVY  SY PR+ ++ EGK+  V+ ++ ++GI
Sbjct:   79 SWKQRTDMYMRPFLLNVFFSRKFIHAKVMHRPTSKVISVATTNARDIRTNIPSLVDNEACRLIGKLIAERSMEADVYAVSYEPRKGERIEGKLGIVIDTIKEHGI 183          
The following BLAST results are available for this feature:
BLAST of FG536927 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9I832_POPTR5.236e-5391.30Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9T8N7_RICCO6.839e-5393.04Structural constituent of ribosome, putative OS=Ri... [more]
D7TUX5_VITVI4.433e-5292.17Whole genome shotgun sequence of line PN40024, sca... [more]
A9NZ46_PICSI1.684e-5188.70Putative uncharacterized protein OS=Picea sitchens... [more]
Q8GW22_ARATH2.873e-5187.83At1g08850 OS=Arabidopsis thaliana GN=At1g08845 PE=... [more]
D7KIV9_ARALY8.360e-5186.96Structural constituent of ribosome OS=Arabidopsis ... [more]
Q8SB98_ORYSA1.862e-5086.96Putative uncharacterized protein OSJNBa0042H09.18 ... [more]
Q7XC72_ORYSJ1.862e-5086.96Expressed protein OS=Oryza sativa subsp. japonica ... [more]
A2ZA70_ORYSI1.862e-5086.96Putative uncharacterized protein OS=Oryza sativa s... [more]
C5WSC9_SORBI7.077e-5086.09Putative uncharacterized protein Sb01g029100 OS=So... [more]
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BLAST of FG536927 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT1G08845.22.518e-5387.83| Symbols: | Ribosomal L18p/L5e family protein | ... [more]
AT1G08845.12.518e-5387.83| Symbols: | Ribosomal L18p/L5e family protein | ... [more]
AT3G22450.12.221e-2549.55| Symbols: | Ribosomal L18p/L5e family protein | ... [more]
AT3G20230.14.631e-2346.67| Symbols: | Ribosomal L18p/L5e family protein | ... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005484Ribosomal protein L18/L5PFAMPF00861Ribosomal_L18pcoord: 5..109
score: 2
NoneNo IPR availableGENE3D3.30.420.100no descriptioncoord: 16..109
score: 1.6
NoneNo IPR availableSUPERFAMILY53137Translational machinery componentscoord: 15..110
score: 4.9

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG536927 ID=FG536927; Name=FG536927; organism=Pisum sativum; type=EST; length=507bp
CAAACACATATCATTCAAACAAAGAACAGTTGCATACATGGAGCCTTTTA
CACTTGACGTGTTTATCTCAAAACGTTTTGTATCTGCTTCACTCACTCAT
AGAGTAACAAGCAAACAGGTTGCAGTTGCAGGTACCAACTCCAAGGACAT
TAAAGCTGTTCTTAGATCTCGATCAGACATACCAGCATGCATAGCCATTG
ATCGGATTTTAGCTGAACGAGCAGTGGAAGCGGATGTTTACACTGCTTCA
TATACTCCAAGGGAACGAGATAAGTTTGAAGGGAAAATCAGAGCTGTTGT
TCAATCACTCATTGATAATGGGATTGATCTCAAGGTTTATCTTGATTGAG
TCTCGCACAATCTTTTAAAGCAAACACTACCAGCCGGTTAAGTTATTTAG
ATTCTGGTTGTGTTTCATTTATGTCCATGTAGCTTGATAAATTATAAATT
GATATATAGTTTTGTGAACTAAAGATTATGGAATAAGTAGACATCGAGCG
AGTTTTC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular anatomical structure
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR005484Ribosomal_uL18