FG536981

EST Overview
NameFG536981
Unique NameFG536981
TypeEST
OrganismPisum sativum (pea)
Sequence length439
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
[Close]
BLAST of FG536981 vs. TrEMBL
Match: B9S9W3_RICCO (Paramyosin, putative OS=Ricinus communis GN=RCOM_0522870 PE=4 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.303e-12
Identity = 41/71 (57.75%), Postives = 46/71 (64.79%), Query Frame = 3 
Query:    6 LSSESSPQHYRIQKQNLPPPHKTVAVRXXXXXXXXXXXXAGLPNISGIFQRKKSHLAEGGSASYLPGENPV 218
            +S ESSP HYRIQKQN P P   + VR            A LPN+SGIFQRKK+ + EGGS SYLPGE PV
Sbjct:  584 MSIESSPHHYRIQKQN-PAPKNVIEVRKLDKEKNSASKKALLPNLSGIFQRKKNQI-EGGSPSYLPGEKPV 652
[Close]
BLAST of FG536981 vs. TrEMBL
Match: B9GFY6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_550223 PE=4 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.886e-10
Identity = 38/71 (53.52%), Postives = 44/71 (61.97%), Query Frame = 3 
Query:    6 LSSESSPQHYRIQKQNLPPPHKTVAVRXXXXXXXXXXXXAGLPNISGIFQRKKSHLAEGGSASYLPGENPV 218
            ++SESSP HYR QKQN P     + VR            A LPN+SGIF RKK+ + EGGS SYLPGE PV
Sbjct:  584 MASESSPHHYRNQKQN-PAIQTVIEVRKLDKEKFSLSKKALLPNLSGIFYRKKNQI-EGGSPSYLPGEKPV 652
[Close]
BLAST of FG536981 vs. TrEMBL
Match: D7UAJ3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_15.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00014707001 PE=4 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.994e-10
Identity = 38/71 (53.52%), Postives = 44/71 (61.97%), Query Frame = 3 
Query:    6 LSSESSPQHYRIQKQNLPPPHKTVAVRXXXXXXXXXXXXAGLPNISGIFQRKKSHLAEGGSASYLPGENPV 218
            +SSESSP+ YRIQKQN PP       R            A LPN+SGIF RKK+ + EGGS SYLPGE P+
Sbjct:  391 MSSESSPRQYRIQKQN-PPQKINEGGRKMEKEKSSVSKKALLPNLSGIFHRKKNQI-EGGSPSYLPGEKPI 459
[Close]
BLAST of FG536981 vs. TrEMBL
Match: A5C0E0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000013 PE=4 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.994e-10
Identity = 38/71 (53.52%), Postives = 44/71 (61.97%), Query Frame = 3 
Query:    6 LSSESSPQHYRIQKQNLPPPHKTVAVRXXXXXXXXXXXXAGLPNISGIFQRKKSHLAEGGSASYLPGENPV 218
            +SSESSP+ YRIQKQN PP       R            A LPN+SGIF RKK+ + EGGS SYLPGE P+
Sbjct:  582 MSSESSPRQYRIQKQN-PPQKINEGGRKMEKEKSSVSKKALLPNLSGIFHRKKNQI-EGGSPSYLPGEKPI 650
The following BLAST results are available for this feature:
BLAST of FG536981 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
B9S9W3_RICCO3.303e-1257.75Paramyosin, putative OS=Ricinus communis GN=RCOM_0... [more]
B9GFY6_POPTR6.886e-1053.52Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7UAJ3_VITVI8.994e-1053.52Whole genome shotgun sequence of line PN40024, sca... [more]
A5C0E0_VITVI8.994e-1053.52Putative uncharacterized protein OS=Vitis vinifera... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 29..40
score
NoneNo IPR availableSEGsegsegcoord: 17..24
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG536981 ID=FG536981; Name=FG536981; organism=Pisum sativum; type=EST; length=439bp
AATCATTGTCGTCAGAATCATCTCCTCAGCATTATAGGATTCAAAAGCAG
AATCTTCCTCCTCCTCATAAAACAGTGGCAGTGAGGAAGTTGGAAAAAGA
GAAGGTTTCGTCTTCGAAGAAGGCTGGGTTGCCTAATATTAGTGGTATCT
TTCAGAGGAAGAAAAGTCATTTAGCTGAGGGTGGGTCTGCTTCTTATTTG
CCTGGTGAGAATCCTGTATAGTTTGTTGTGAAGCTCTTGGGATTGTGAGA
AAAAAACATGTTGAAGATTTGTGCGTAGTTGAGGAATTTGAGTAGATTTT
TTGTTAATGAAGTGCGTTTGAAGGAAAGTATTGTATGGTGTTAATAGTTT
GGTGAAATATTATGCGACATGCTTATATGTAAAGGGAACATGTGGAAAAA
TTAAAATCTTTTGGTAAAATATCTATTTGTATTTTTTCC
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