FG537289

EST Overview
NameFG537289
Unique NameFG537289
TypeEST
OrganismPisum sativum (pea)
Sequence length384
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of FG537289 vs. TrEMBL
Match: B9HK93_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_765086 PE=4 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 4.518e-9
Identity = 36/71 (50.70%), Postives = 45/71 (63.38%), Query Frame = 1
Query:    7 DIMRDQSYLFQVFRFMTANSFLMDYPDKPLVYPPVLVKEMG--SEVYDGKKHLHGGKDVVEDGTKGIVEKF 213
            DI RD+  L QVFRFM ANSF  D+P+KPL +P V+VKE G   E+ + K  L  G++V ED    I E F
Sbjct:  550 DIKRDKRQLLQVFRFMVANSFFKDWPEKPLKFPSVVVKEDGYEDEIVEKKSSL-VGEEVSEDRNNTIAENF 619          
BLAST of FG537289 vs. TrEMBL
Match: A5AVH9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043067 PE=4 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 4.996e-8
Identity = 35/71 (49.30%), Postives = 43/71 (60.56%), Query Frame = 1
Query:    7 DIMRDQSYLFQVFRFMTANSFLMDYPDKPLVYPPVLVKEMG--SEVYDGKKHLHGGKDVVEDGTKGIVEKF 213
            DI RD+ +L QVFRFM  NSF  D+P+KPL +P V VKE G   EV D +K     K V + G K   E+F
Sbjct:  497 DIKRDKRHLLQVFRFMAMNSFFKDWPEKPLKFPLVAVKETGCQGEVVD-RKSSPTSKGVPQGGRKTXAEEF 566          
BLAST of FG537289 vs. TAIR peptide
Match: AT5G18440.2 (| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear fragile X mental retardation-interacting protein 1, conserved region (InterPro:IPR019496); Has 1333 Blast hits to 1211 proteins in 205 species: Archae - 0; Bacteria - 137; Metazoa - 339; Fungi - 162; Plants - 70; Viruses - 6; Other Eukaryotes - 619 (source: NCBI BLink). | chr5:6113092-6115748 FORWARD LENGTH=470)

HSP 1 Score: 55.0694 bits (131), Expect = 1.337e-8
Identity = 29/62 (46.77%), Postives = 37/62 (59.68%), Query Frame = 1
Query:    4 ADIMRDQSYLFQVFRFMTANSFLMDYPDKPLVYPPVLVKEMGSEVYDGKKHLHGGKDVVEDG 189
            ADI RD+S L QVFRFM  NS L ++P++PL  P + VKE G E       + G  D + DG
Sbjct:  395 ADIKRDKSQLLQVFRFMVMNSLLKEFPEQPLKLPLITVKETGCEDAMEDPSIEGLCDGLSDG 456          
BLAST of FG537289 vs. TAIR peptide
Match: AT5G18440.1 (| Symbols: | CONTAINS InterPro DOMAIN/s: Nuclear fragile X mental retardation-interacting protein 1, conserved region (InterPro:IPR019496); Has 1333 Blast hits to 1211 proteins in 205 species: Archae - 0; Bacteria - 137; Metazoa - 339; Fungi - 162; Plants - 70; Viruses - 6; Other Eukaryotes - 619 (source: NCBI BLink). | chr5:6113092-6115748 FORWARD LENGTH=470)

HSP 1 Score: 55.0694 bits (131), Expect = 1.337e-8
Identity = 29/62 (46.77%), Postives = 37/62 (59.68%), Query Frame = 1
Query:    4 ADIMRDQSYLFQVFRFMTANSFLMDYPDKPLVYPPVLVKEMGSEVYDGKKHLHGGKDVVEDG 189
            ADI RD+S L QVFRFM  NS L ++P++PL  P + VKE G E       + G  D + DG
Sbjct:  395 ADIKRDKSQLLQVFRFMVMNSLLKEFPEQPLKLPLITVKETGCEDAMEDPSIEGLCDGLSDG 456          
The following BLAST results are available for this feature:
BLAST of FG537289 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
B9HK93_POPTR4.518e-950.70Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A5AVH9_VITVI4.996e-849.30Putative uncharacterized protein OS=Vitis vinifera... [more]
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BLAST of FG537289 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G18440.21.337e-846.77| Symbols: | FUNCTIONS IN: molecular_function unk... [more]
AT5G18440.11.337e-846.77| Symbols: | CONTAINS InterPro DOMAIN/s: Nuclear ... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 74..94
score
NoneNo IPR availableSEGsegsegcoord: 12..29
score
NoneNo IPR availableSEGsegsegcoord: 14..44
score
NoneNo IPR availableSEGsegsegcoord: 27..61
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG537289 ID=FG537289; Name=FG537289; organism=Pisum sativum; type=EST; length=384bp
AGGGCAGATATAATGAGGGATCAAAGCTACCTGTTTCAGGTTTTCAGGTT
CATGACAGCGAATTCGTTCTTGATGGATTATCCTGATAAGCCTCTGGTAT
ATCCACCAGTTTTGGTAAAAGAAATGGGGTCTGAAGTTTATGATGGAAAA
AAACATTTGCATGGCGGAAAAGATGTTGTTGAAGATGGTACCAAGGGAAT
AGTTGAAAAATTTGTAAAGGATAGTGGTAATGAAGTTGAAGAAAGTGATG
ATGATGGTGATAATGGAGATGGAATGGTTGAGTTTGAGGATGAGGAGGGG
GAAATTTTAGAGTAAAACATGATGTTTGGTTTATGTTGTTGTTTCAACAA
AGCTTTTGAATAGGAATGATTGTAATGTTGTGTT
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