FG537775
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FG537775 vs. TrEMBL
Match: B9SDW1_RICCO (Glutamate receptor 3 plant, putative OS=Ricinus communis GN=RCOM_0487570 PE=4 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.036e-25 Identity = 52/104 (50.00%), Postives = 73/104 (70.19%), Query Frame = 1 Query: 7 LHEKWFCKMGCPGERKSDPKPDQLHLISFWGLYLSCSVISVIALVLFMLRMISQYVGFKQRQKXXXXXXXXXXXXXXXRVVVNFFNFIDKKEDAIKKMFTQCDN 318 +HEKWFCK GC GE++ +P+QL LISFWGLYL C +++ AL+LF+LR + Q+V +K+RQ +++ +FF+FIDKKE+AIKKMF QCD+ Sbjct: 808 IHEKWFCKKGCAGEKRQKSEPNQLRLISFWGLYLLCGGVTLAALLLFLLRAVRQFVHYKRRQMQQVPPSVILSTTRCSQIIFHFFDFIDKKEEAIKKMFMQCDH 911
BLAST of FG537775 vs. TrEMBL
Match: D7TEL9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00030600001 PE=4 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.267e-23 Identity = 52/105 (49.52%), Postives = 73/105 (69.52%), Query Frame = 1 Query: 7 LHEKWFCKMGCPGERKSDPKPDQLHLISFWGLYLSCSVISVIALVLFMLRMISQYVGFKQRQK-XXXXXXXXXXXXXXXRVVVNFFNFIDKKEDAIKKMFTQCDN 318 +HE WFCKMGCPG R+ +P+QLH+ISFWGLYL C I++IAL++F+LR I Q+ +K+++ +V+ NFF+FID+KE+AIKKMF Q +N Sbjct: 728 IHENWFCKMGCPGWRRRKSEPNQLHMISFWGLYLLCGSITLIALLVFLLRTIRQFARYKRKKPIQIGDSPSVSSNTRCSQVIYNFFDFIDEKEEAIKKMFKQQEN 832
BLAST of FG537775 vs. TrEMBL
Match: B9GU65_POPTR (Glutamate-gated kainate-type ion channel receptor subunit GluR5 OS=Populus trichocarpa GN=POPTRDRAFT_711342 PE=4 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 6.286e-23 Identity = 51/107 (47.66%), Postives = 72/107 (67.29%), Query Frame = 1 Query: 7 LHEKWFCKMGCPGERKSDPKPDQLHLISFWGLYLSCSVISVIALVLFMLRMISQYVGFKQRQKXXXXXXXXXXXXXXXRVVVNFFNFIDKKEDAIKKMFTQCDNNPH 327 ++EKWFCKMGC GE+K P+QL L SFWGLY+ C ++ ALV+F+LRM+ Q+V +K+RQ V+ +FF+FID++E+AIKKMF Q + +PH Sbjct: 751 IYEKWFCKMGCHGEKKHGDGPNQLKLTSFWGLYILCGAFALTALVVFLLRMVRQFVRYKRRQLRCSSPSSISPSTRCSHVIYHFFDFIDEREEAIKKMFNQRE-HPH 856
BLAST of FG537775 vs. TrEMBL
Match: D7LEY2_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_482168 PE=4 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.148e-16 Identity = 43/113 (38.05%), Postives = 70/113 (61.95%), Query Frame = 1 Query: 7 LHEKWFCKMGCPGERKSDPKPDQLHLISFWGLYLSCSVISVIALVLFMLRMISQYVGFKQRQKXXXXXXXXXXXXXXXR---VVVNFFNFIDKKEDAIKKMFTQCDNNPHNPN 336 + +KW CK C + +P+P+QLHL SF GLYL C I+V A ++F+LRMI Q+V +++ ++ R +V +F F+D+KE+AIK+MF + D++ +NP+ Sbjct: 796 IRKKWLCKKNCAEKSNWNPEPNQLHLKSFKGLYLVCIAITVSAFIVFVLRMIRQFVRYRRMERTCSLPRASWSSSPSMRLRELVFDFVEFVDEKEEAIKRMFRRSDDSNNNPS 908
BLAST of FG537775 vs. TrEMBL
Match: D7MIH0_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_915921 PE=4 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 6.748e-9 Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 1 Query: 7 LHEKWFCKMGCPGERKSDPKPDQLHLISFWGLYLSCSVISVIALVLFMLRMISQYV 174 + +KW CK C + +P+P+QLHL SF GLYL C I+V A ++F+LRMI Q+V Sbjct: 402 IRKKWLCKKNCAEKSNWNPEPNQLHLKSFKGLYLVCIAITVSAFIVFVLRMIRQFV 457
BLAST of FG537775 vs. SwissProt
Match: GLR37_ARATH (Glutamate receptor 3.7 OS=Arabidopsis thaliana GN=GLR3.7 PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 1.786e-18 Identity = 44/113 (38.94%), Postives = 71/113 (62.83%), Query Frame = 1 Query: 7 LHEKWFCKMGCPGERKSDPKPDQLHLISFWGLYLSCSVISVIALVLFMLRMISQYVGFKQRQKXXXXXXXXXXXXXXXR---VVVNFFNFIDKKEDAIKKMFTQCDNNPHNPN 336 + +KW CK C G+ +P+P+QLHL SF GLYL C I+V A ++F+LRMI Q+V +++ ++ R +V +F F+D+KE+AIK+MF + D++ +NP+ Sbjct: 795 IRKKWLCKTNCAGKSNWNPEPNQLHLKSFKGLYLVCIAITVSAFLVFVLRMIRQFVRYRRMERTSSMPRASWSASPTLRLRELVFDFVEFVDEKEEAIKRMFRRSDDSNNNPS 907
BLAST of FG537775 vs. TAIR peptide
Match: AT2G32400.1 (| Symbols: GLR5, GLR3.7, ATGLR3.7 | glutamate receptor 5 | chr2:13752665-13756233 REVERSE LENGTH=921) HSP 1 Score: 92.0485 bits (227), Expect = 1.967e-19 Identity = 44/113 (38.94%), Postives = 71/113 (62.83%), Query Frame = 1 Query: 7 LHEKWFCKMGCPGERKSDPKPDQLHLISFWGLYLSCSVISVIALVLFMLRMISQYVGFKQRQKXXXXXXXXXXXXXXXR---VVVNFFNFIDKKEDAIKKMFTQCDNNPHNPN 336 + +KW CK C G+ +P+P+QLHL SF GLYL C I+V A ++F+LRMI Q+V +++ ++ R +V +F F+D+KE+AIK+MF + D++ +NP+ Sbjct: 795 IRKKWLCKTNCAGKSNWNPEPNQLHLKSFKGLYLVCIAITVSAFLVFVLRMIRQFVRYRRMERTSSMPRASWSASPTLRLRELVFDFVEFVDEKEEAIKRMFRRSDDSNNNPS 907
BLAST of FG537775 vs. TAIR peptide
Match: AT1G42540.1 (| Symbols: ATGLR3.3, GLR3.3 | glutamate receptor 3.3 | chr1:15973489-15976703 FORWARD LENGTH=933) HSP 1 Score: 51.6026 bits (122), Expect = 2.946e-7 Identity = 23/54 (42.59%), Postives = 36/54 (66.67%), Query Frame = 1 Query: 7 LHEKWFCKMGCPGERKSDPKPDQLHLISFWGLYLSCSVISVIALVLFMLRMISQ 168 +H+KW K C E ++ + D+LHL SFWGL+L C V ++AL L+ +++I Q Sbjct: 802 IHDKWLMKNACTLEN-AELESDRLHLKSFWGLFLICGVACLLALFLYFVQIIRQ 854 The following BLAST results are available for this feature:
BLAST of FG537775 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 5
BLAST of FG537775 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 1
BLAST of FG537775 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FG537775 ID=FG537775; Name=FG537775; organism=Pisum sativum; type=EST; length=522bpback to top |