FG537775

EST Overview
NameFG537775
Unique NameFG537775
TypeEST
OrganismPisum sativum (pea)
Sequence length522
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of FG537775 vs. TrEMBL
Match: B9SDW1_RICCO (Glutamate receptor 3 plant, putative OS=Ricinus communis GN=RCOM_0487570 PE=4 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.036e-25
Identity = 52/104 (50.00%), Postives = 73/104 (70.19%), Query Frame = 1
Query:    7 LHEKWFCKMGCPGERKSDPKPDQLHLISFWGLYLSCSVISVIALVLFMLRMISQYVGFKQRQKXXXXXXXXXXXXXXXRVVVNFFNFIDKKEDAIKKMFTQCDN 318
            +HEKWFCK GC GE++   +P+QL LISFWGLYL C  +++ AL+LF+LR + Q+V +K+RQ                +++ +FF+FIDKKE+AIKKMF QCD+
Sbjct:  808 IHEKWFCKKGCAGEKRQKSEPNQLRLISFWGLYLLCGGVTLAALLLFLLRAVRQFVHYKRRQMQQVPPSVILSTTRCSQIIFHFFDFIDKKEEAIKKMFMQCDH 911          
BLAST of FG537775 vs. TrEMBL
Match: D7TEL9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00030600001 PE=4 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.267e-23
Identity = 52/105 (49.52%), Postives = 73/105 (69.52%), Query Frame = 1
Query:    7 LHEKWFCKMGCPGERKSDPKPDQLHLISFWGLYLSCSVISVIALVLFMLRMISQYVGFKQRQK-XXXXXXXXXXXXXXXRVVVNFFNFIDKKEDAIKKMFTQCDN 318
            +HE WFCKMGCPG R+   +P+QLH+ISFWGLYL C  I++IAL++F+LR I Q+  +K+++                 +V+ NFF+FID+KE+AIKKMF Q +N
Sbjct:  728 IHENWFCKMGCPGWRRRKSEPNQLHMISFWGLYLLCGSITLIALLVFLLRTIRQFARYKRKKPIQIGDSPSVSSNTRCSQVIYNFFDFIDEKEEAIKKMFKQQEN 832          
BLAST of FG537775 vs. TrEMBL
Match: B9GU65_POPTR (Glutamate-gated kainate-type ion channel receptor subunit GluR5 OS=Populus trichocarpa GN=POPTRDRAFT_711342 PE=4 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.286e-23
Identity = 51/107 (47.66%), Postives = 72/107 (67.29%), Query Frame = 1
Query:    7 LHEKWFCKMGCPGERKSDPKPDQLHLISFWGLYLSCSVISVIALVLFMLRMISQYVGFKQRQKXXXXXXXXXXXXXXXRVVVNFFNFIDKKEDAIKKMFTQCDNNPH 327
            ++EKWFCKMGC GE+K    P+QL L SFWGLY+ C   ++ ALV+F+LRM+ Q+V +K+RQ                 V+ +FF+FID++E+AIKKMF Q + +PH
Sbjct:  751 IYEKWFCKMGCHGEKKHGDGPNQLKLTSFWGLYILCGAFALTALVVFLLRMVRQFVRYKRRQLRCSSPSSISPSTRCSHVIYHFFDFIDEREEAIKKMFNQRE-HPH 856          
BLAST of FG537775 vs. TrEMBL
Match: D7LEY2_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_482168 PE=4 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.148e-16
Identity = 43/113 (38.05%), Postives = 70/113 (61.95%), Query Frame = 1
Query:    7 LHEKWFCKMGCPGERKSDPKPDQLHLISFWGLYLSCSVISVIALVLFMLRMISQYVGFKQRQKXXXXXXXXXXXXXXXR---VVVNFFNFIDKKEDAIKKMFTQCDNNPHNPN 336
            + +KW CK  C  +   +P+P+QLHL SF GLYL C  I+V A ++F+LRMI Q+V +++ ++               R   +V +F  F+D+KE+AIK+MF + D++ +NP+
Sbjct:  796 IRKKWLCKKNCAEKSNWNPEPNQLHLKSFKGLYLVCIAITVSAFIVFVLRMIRQFVRYRRMERTCSLPRASWSSSPSMRLRELVFDFVEFVDEKEEAIKRMFRRSDDSNNNPS 908          
BLAST of FG537775 vs. TrEMBL
Match: D7MIH0_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_915921 PE=4 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 6.748e-9
Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 1
Query:    7 LHEKWFCKMGCPGERKSDPKPDQLHLISFWGLYLSCSVISVIALVLFMLRMISQYV 174
            + +KW CK  C  +   +P+P+QLHL SF GLYL C  I+V A ++F+LRMI Q+V
Sbjct:  402 IRKKWLCKKNCAEKSNWNPEPNQLHLKSFKGLYLVCIAITVSAFIVFVLRMIRQFV 457          
BLAST of FG537775 vs. SwissProt
Match: GLR37_ARATH (Glutamate receptor 3.7 OS=Arabidopsis thaliana GN=GLR3.7 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 1.786e-18
Identity = 44/113 (38.94%), Postives = 71/113 (62.83%), Query Frame = 1
Query:    7 LHEKWFCKMGCPGERKSDPKPDQLHLISFWGLYLSCSVISVIALVLFMLRMISQYVGFKQRQKXXXXXXXXXXXXXXXR---VVVNFFNFIDKKEDAIKKMFTQCDNNPHNPN 336
            + +KW CK  C G+   +P+P+QLHL SF GLYL C  I+V A ++F+LRMI Q+V +++ ++               R   +V +F  F+D+KE+AIK+MF + D++ +NP+
Sbjct:  795 IRKKWLCKTNCAGKSNWNPEPNQLHLKSFKGLYLVCIAITVSAFLVFVLRMIRQFVRYRRMERTSSMPRASWSASPTLRLRELVFDFVEFVDEKEEAIKRMFRRSDDSNNNPS 907          
BLAST of FG537775 vs. TAIR peptide
Match: AT2G32400.1 (| Symbols: GLR5, GLR3.7, ATGLR3.7 | glutamate receptor 5 | chr2:13752665-13756233 REVERSE LENGTH=921)

HSP 1 Score: 92.0485 bits (227), Expect = 1.967e-19
Identity = 44/113 (38.94%), Postives = 71/113 (62.83%), Query Frame = 1
Query:    7 LHEKWFCKMGCPGERKSDPKPDQLHLISFWGLYLSCSVISVIALVLFMLRMISQYVGFKQRQKXXXXXXXXXXXXXXXR---VVVNFFNFIDKKEDAIKKMFTQCDNNPHNPN 336
            + +KW CK  C G+   +P+P+QLHL SF GLYL C  I+V A ++F+LRMI Q+V +++ ++               R   +V +F  F+D+KE+AIK+MF + D++ +NP+
Sbjct:  795 IRKKWLCKTNCAGKSNWNPEPNQLHLKSFKGLYLVCIAITVSAFLVFVLRMIRQFVRYRRMERTSSMPRASWSASPTLRLRELVFDFVEFVDEKEEAIKRMFRRSDDSNNNPS 907          
BLAST of FG537775 vs. TAIR peptide
Match: AT1G42540.1 (| Symbols: ATGLR3.3, GLR3.3 | glutamate receptor 3.3 | chr1:15973489-15976703 FORWARD LENGTH=933)

HSP 1 Score: 51.6026 bits (122), Expect = 2.946e-7
Identity = 23/54 (42.59%), Postives = 36/54 (66.67%), Query Frame = 1
Query:    7 LHEKWFCKMGCPGERKSDPKPDQLHLISFWGLYLSCSVISVIALVLFMLRMISQ 168
            +H+KW  K  C  E  ++ + D+LHL SFWGL+L C V  ++AL L+ +++I Q
Sbjct:  802 IHDKWLMKNACTLEN-AELESDRLHLKSFWGLFLICGVACLLALFLYFVQIIRQ 854          
The following BLAST results are available for this feature:
BLAST of FG537775 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 5
Match NameE-valueIdentityDescription
B9SDW1_RICCO1.036e-2550.00Glutamate receptor 3 plant, putative OS=Ricinus co... [more]
D7TEL9_VITVI1.267e-2349.52Whole genome shotgun sequence of line PN40024, sca... [more]
B9GU65_POPTR6.286e-2347.66Glutamate-gated kainate-type ion channel receptor ... [more]
D7LEY2_ARALY1.148e-1638.05Putative uncharacterized protein OS=Arabidopsis ly... [more]
D7MIH0_ARALY6.748e-950.00Putative uncharacterized protein OS=Arabidopsis ly... [more]
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BLAST of FG537775 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
GLR37_ARATH1.786e-1838.94Glutamate receptor 3.7 OS=Arabidopsis thaliana GN=... [more]
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BLAST of FG537775 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT2G32400.11.967e-1938.94| Symbols: GLR5, GLR3.7, ATGLR3.7 | glutamate rece... [more]
AT1G42540.12.946e-742.59| Symbols: ATGLR3.3, GLR3.3 | glutamate receptor 3... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 66..80
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG537775 ID=FG537775; Name=FG537775; organism=Pisum sativum; type=EST; length=522bp
ATGACACTGCATGAGAAATGGTTTTGCAAAATGGGCTGTCCCGGTGAACG
GAAAAGCGACCCTAAACCCGACCAACTTCACTTGATCAGCTTCTGGGGTC
TATATCTCTCATGCAGTGTCATCTCTGTCATCGCGCTTGTTCTGTTTATG
CTGCGAATGATCAGCCAATATGTTGGATTCAAACAAAGACAGAAGGACAG
CGCTGCCTCGTCGTCGGAACCGTCGGACAGTCATTGTTCCCGGGTCGTAG
TGAACTTCTTTAACTTCATAGATAAAAAAGAAGATGCAATCAAGAAAATG
TTCACTCAATGTGACAATAATCCTCATAACCCCAACTCAGAATTATGATA
GTGCCAAACAATAATGGTCATCATGTACATAGTATTTGTAGAAGCACAAA
TATTTGTCTAGTTTTTGAAAAAATGTTGTCCTGTCAACAATGGTTTGCTA
CATTATTCAAATGAAATGTAATGATAATAATAACATGTGAAAATATAGTT
CATGAATTATATANNANANANN
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