FG538671
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FG538671 vs. TrEMBL
Match: B9HMM7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_803275 PE=4 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.404e-25 Identity = 56/75 (74.67%), Postives = 69/75 (92.00%), Query Frame = 1 Query: 1 YTLQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKENEQLRQLL 225 +TLQLFQRTL ETL SFQKSIHED+RN+H+E+LRQFH+Q ME S++M+SILEN AEL+KE+K LRKEN++LRQLL Sbjct: 711 FTLQLFQRTLEETLDSFQKSIHEDMRNLHIEILRQFHMQEMEFSSVMSSILENQAELMKEIKTLRKENQELRQLL 785
BLAST of FG538671 vs. TrEMBL
Match: D7TLM2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_19.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016463001 PE=4 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 6.966e-25 Identity = 54/75 (72.00%), Postives = 71/75 (94.67%), Query Frame = 1 Query: 1 YTLQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKENEQLRQLL 225 +TLQLFQRTL+ETLGSFQKSIHED++N+H+E+LRQFH+Q +MS++M+SIL+N EL+KEV++LRKEN+QLRQLL Sbjct: 705 FTLQLFQRTLDETLGSFQKSIHEDMKNLHIEILRQFHIQETDMSSVMSSILKNQVELMKEVQSLRKENQQLRQLL 779
BLAST of FG538671 vs. TrEMBL
Match: B9SE21_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1482560 PE=4 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 9.098e-25 Identity = 54/75 (72.00%), Postives = 68/75 (90.67%), Query Frame = 1 Query: 1 YTLQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKENEQLRQLL 225 +TLQLFQRTL ETL SFQKSIHED+RN+H+E+LRQFH+Q ME S+ M+S+LEN AEL+KE+K+LR+EN +LRQLL Sbjct: 725 FTLQLFQRTLQETLDSFQKSIHEDMRNLHIEILRQFHMQEMEFSSAMSSVLENQAELMKEIKSLRRENHELRQLL 799
BLAST of FG538671 vs. TrEMBL
Match: Q9FI89_ARATH (Similarity to regulatory protein Nedd1 OS=Arabidopsis thaliana PE=4 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.209e-22 Identity = 51/75 (68.00%), Postives = 64/75 (85.33%), Query Frame = 1 Query: 1 YTLQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKENEQLRQLL 225 +TLQLFQRTL TL SFQ SIH+DVRN+H+E+LRQFH+ MEMS +++SILEN AE +KE+K LRKEN++LRQ L Sbjct: 713 FTLQLFQRTLEGTLDSFQNSIHDDVRNLHIEILRQFHMHEMEMSKVLSSILENQAEQMKELKLLRKENQELRQRL 787
BLAST of FG538671 vs. TrEMBL
Match: B6EUA6_ARATH (Putative uncharacterized protein At5g05970.1 OS=Arabidopsis thaliana GN=At5g05970 PE=4 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.209e-22 Identity = 51/75 (68.00%), Postives = 64/75 (85.33%), Query Frame = 1 Query: 1 YTLQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKENEQLRQLL 225 +TLQLFQRTL TL SFQ SIH+DVRN+H+E+LRQFH+ MEMS +++SILEN AE +KE+K LRKEN++LRQ L Sbjct: 707 FTLQLFQRTLEGTLDSFQNSIHDDVRNLHIEILRQFHMHEMEMSKVLSSILENQAEQMKELKLLRKENQELRQRL 781
BLAST of FG538671 vs. TrEMBL
Match: B3H5K9_ARATH (Uncharacterized protein At5g05970.2 OS=Arabidopsis thaliana GN=At5g05970 PE=4 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.209e-22 Identity = 51/75 (68.00%), Postives = 64/75 (85.33%), Query Frame = 1 Query: 1 YTLQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKENEQLRQLL 225 +TLQLFQRTL TL SFQ SIH+DVRN+H+E+LRQFH+ MEMS +++SILEN AE +KE+K LRKEN++LRQ L Sbjct: 708 FTLQLFQRTLEGTLDSFQNSIHDDVRNLHIEILRQFHMHEMEMSKVLSSILENQAEQMKELKLLRKENQELRQRL 782
BLAST of FG538671 vs. TrEMBL
Match: B9HT53_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_833791 PE=4 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 9.415e-22 Identity = 50/68 (73.53%), Postives = 62/68 (91.18%), Query Frame = 1 Query: 1 YTLQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKEN 204 +TLQLFQRTL ETL SFQKSIHED+R++H+E+LRQFH+Q ME+S +MNSILEN AEL+KE+K+L KEN Sbjct: 710 FTLQLFQRTLEETLDSFQKSIHEDMRSLHIEILRQFHMQEMELSGVMNSILENQAELMKEIKSLGKEN 777
BLAST of FG538671 vs. TrEMBL
Match: D7LZ27_ARALY (Transducin family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_487399 PE=4 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.578e-21 Identity = 49/75 (65.33%), Postives = 64/75 (85.33%), Query Frame = 1 Query: 1 YTLQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKENEQLRQLL 225 +TLQLFQRTL TL SFQ SIH+DVRN+H+E+LRQFH+ MEMS +++SILEN AE +KE+K LRKEN++L++ L Sbjct: 706 FTLQLFQRTLEGTLDSFQNSIHDDVRNLHIEILRQFHMHEMEMSKVLSSILENQAEQMKELKLLRKENQELKERL 780
BLAST of FG538671 vs. TrEMBL
Match: A9RBJ3_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_111001 PE=4 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.103e-21 Identity = 50/74 (67.57%), Postives = 64/74 (86.49%), Query Frame = 1 Query: 1 YTLQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKENEQLRQL 222 + LQL QR L E+LG+ Q++IHE+V+NVHLE+LRQFH+Q MEMS+MM+S LE AELV+EVKALR+EN+QLR L Sbjct: 716 FALQLVQRGLEESLGAVQRAIHEEVQNVHLELLRQFHIQQMEMSSMMDSFLEKQAELVEEVKALRRENQQLRDL 789
BLAST of FG538671 vs. TrEMBL
Match: A9RFH7_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_65425 PE=4 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.374e-19 Identity = 46/74 (62.16%), Postives = 62/74 (83.78%), Query Frame = 1 Query: 1 YTLQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKENEQLRQL 222 + LQL QR L E+LG+ Q++IHE+V+++HLE+LRQFH+Q MEMS+MM S L AELV+E+KALR+EN+QLR L Sbjct: 660 FALQLVQRGLEESLGAVQRAIHEEVQSLHLELLRQFHIQQMEMSSMMESFLARQAELVEEIKALRRENQQLRDL 733
BLAST of FG538671 vs. SwissProt
Match: NEDD1_MOUSE (Protein NEDD1 OS=Mus musculus GN=Nedd1 PE=2 SV=2) HSP 1 Score: 55.0694 bits (131), Expect = 2.532e-7 Identity = 25/70 (35.71%), Postives = 46/70 (65.71%), Query Frame = 1 Query: 7 LQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKENEQLR 216 ++ Q + ETL F+++ H D+ N+ +E+++QFH+Q EM +++ N LV E++ LR+EN++LR Sbjct: 589 IRFIQNMIQETLDDFREACHRDIVNLQVEMIKQFHIQLNEMHSLLERYSVNEG-LVAEIERLREENKRLR 657
BLAST of FG538671 vs. SwissProt
Match: NEDD1_HUMAN (Protein NEDD1 OS=Homo sapiens GN=NEDD1 PE=1 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 2.532e-7 Identity = 25/70 (35.71%), Postives = 46/70 (65.71%), Query Frame = 1 Query: 7 LQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKENEQLR 216 ++ Q + ETL F+++ H D+ N+ +E+++QFH+Q EM +++ N LV E++ LR+EN++LR Sbjct: 589 IRFIQNMIQETLDDFREACHRDIVNLQVEMIKQFHMQLNEMHSLLERYSVNEG-LVAEIERLREENKRLR 657
BLAST of FG538671 vs. SwissProt
Match: NEDD1_BOVIN (Protein NEDD1 OS=Bos taurus GN=NEDD1 PE=2 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 2.532e-7 Identity = 25/70 (35.71%), Postives = 46/70 (65.71%), Query Frame = 1 Query: 7 LQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKENEQLR 216 ++ Q + ETL F+++ H D+ N+ +E+++QFH+Q EM +++ N LV E++ LR+EN++LR Sbjct: 588 IRFIQNMIQETLDDFREACHRDIVNLQVEMIKQFHMQLNEMHSLLERYSVNEG-LVAEIERLREENKRLR 656
BLAST of FG538671 vs. TAIR peptide
Match: AT5G05970.2 (| Symbols: NEDD1 | Transducin/WD40 repeat-like superfamily protein | chr5:1795464-1799313 FORWARD LENGTH=782) HSP 1 Score: 107.071 bits (266), Expect = 6.035e-24 Identity = 51/75 (68.00%), Postives = 64/75 (85.33%), Query Frame = 1 Query: 1 YTLQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKENEQLRQLL 225 +TLQLFQRTL TL SFQ SIH+DVRN+H+E+LRQFH+ MEMS +++SILEN AE +KE+K LRKEN++LRQ L Sbjct: 708 FTLQLFQRTLEGTLDSFQNSIHDDVRNLHIEILRQFHMHEMEMSKVLSSILENQAEQMKELKLLRKENQELRQRL 782
BLAST of FG538671 vs. TAIR peptide
Match: AT5G05970.1 (| Symbols: NEDD1 | Transducin/WD40 repeat-like superfamily protein | chr5:1795464-1799313 FORWARD LENGTH=781) HSP 1 Score: 107.071 bits (266), Expect = 6.035e-24 Identity = 51/75 (68.00%), Postives = 64/75 (85.33%), Query Frame = 1 Query: 1 YTLQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKENEQLRQLL 225 +TLQLFQRTL TL SFQ SIH+DVRN+H+E+LRQFH+ MEMS +++SILEN AE +KE+K LRKEN++LRQ L Sbjct: 707 FTLQLFQRTLEGTLDSFQNSIHDDVRNLHIEILRQFHMHEMEMSKVLSSILENQAEQMKELKLLRKENQELRQRL 781 The following BLAST results are available for this feature:
BLAST of FG538671 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of FG538671 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 3
BLAST of FG538671 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FG538671 ID=FG538671; Name=FG538671; organism=Pisum sativum; type=EST; length=533bpback to top |