FG538671

EST Overview
NameFG538671
Unique NameFG538671
TypeEST
OrganismPisum sativum (pea)
Sequence length533
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot2010-12-28
Homology
BLAST of FG538671 vs. TrEMBL
Match: B9HMM7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_803275 PE=4 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.404e-25
Identity = 56/75 (74.67%), Postives = 69/75 (92.00%), Query Frame = 1
Query:    1 YTLQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKENEQLRQLL 225
            +TLQLFQRTL ETL SFQKSIHED+RN+H+E+LRQFH+Q ME S++M+SILEN AEL+KE+K LRKEN++LRQLL
Sbjct:  711 FTLQLFQRTLEETLDSFQKSIHEDMRNLHIEILRQFHMQEMEFSSVMSSILENQAELMKEIKTLRKENQELRQLL 785          
BLAST of FG538671 vs. TrEMBL
Match: D7TLM2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_19.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016463001 PE=4 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 6.966e-25
Identity = 54/75 (72.00%), Postives = 71/75 (94.67%), Query Frame = 1
Query:    1 YTLQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKENEQLRQLL 225
            +TLQLFQRTL+ETLGSFQKSIHED++N+H+E+LRQFH+Q  +MS++M+SIL+N  EL+KEV++LRKEN+QLRQLL
Sbjct:  705 FTLQLFQRTLDETLGSFQKSIHEDMKNLHIEILRQFHIQETDMSSVMSSILKNQVELMKEVQSLRKENQQLRQLL 779          
BLAST of FG538671 vs. TrEMBL
Match: B9SE21_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1482560 PE=4 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 9.098e-25
Identity = 54/75 (72.00%), Postives = 68/75 (90.67%), Query Frame = 1
Query:    1 YTLQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKENEQLRQLL 225
            +TLQLFQRTL ETL SFQKSIHED+RN+H+E+LRQFH+Q ME S+ M+S+LEN AEL+KE+K+LR+EN +LRQLL
Sbjct:  725 FTLQLFQRTLQETLDSFQKSIHEDMRNLHIEILRQFHMQEMEFSSAMSSVLENQAELMKEIKSLRRENHELRQLL 799          
BLAST of FG538671 vs. TrEMBL
Match: Q9FI89_ARATH (Similarity to regulatory protein Nedd1 OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.209e-22
Identity = 51/75 (68.00%), Postives = 64/75 (85.33%), Query Frame = 1
Query:    1 YTLQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKENEQLRQLL 225
            +TLQLFQRTL  TL SFQ SIH+DVRN+H+E+LRQFH+  MEMS +++SILEN AE +KE+K LRKEN++LRQ L
Sbjct:  713 FTLQLFQRTLEGTLDSFQNSIHDDVRNLHIEILRQFHMHEMEMSKVLSSILENQAEQMKELKLLRKENQELRQRL 787          
BLAST of FG538671 vs. TrEMBL
Match: B6EUA6_ARATH (Putative uncharacterized protein At5g05970.1 OS=Arabidopsis thaliana GN=At5g05970 PE=4 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.209e-22
Identity = 51/75 (68.00%), Postives = 64/75 (85.33%), Query Frame = 1
Query:    1 YTLQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKENEQLRQLL 225
            +TLQLFQRTL  TL SFQ SIH+DVRN+H+E+LRQFH+  MEMS +++SILEN AE +KE+K LRKEN++LRQ L
Sbjct:  707 FTLQLFQRTLEGTLDSFQNSIHDDVRNLHIEILRQFHMHEMEMSKVLSSILENQAEQMKELKLLRKENQELRQRL 781          
BLAST of FG538671 vs. TrEMBL
Match: B3H5K9_ARATH (Uncharacterized protein At5g05970.2 OS=Arabidopsis thaliana GN=At5g05970 PE=4 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.209e-22
Identity = 51/75 (68.00%), Postives = 64/75 (85.33%), Query Frame = 1
Query:    1 YTLQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKENEQLRQLL 225
            +TLQLFQRTL  TL SFQ SIH+DVRN+H+E+LRQFH+  MEMS +++SILEN AE +KE+K LRKEN++LRQ L
Sbjct:  708 FTLQLFQRTLEGTLDSFQNSIHDDVRNLHIEILRQFHMHEMEMSKVLSSILENQAEQMKELKLLRKENQELRQRL 782          
BLAST of FG538671 vs. TrEMBL
Match: B9HT53_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_833791 PE=4 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 9.415e-22
Identity = 50/68 (73.53%), Postives = 62/68 (91.18%), Query Frame = 1
Query:    1 YTLQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKEN 204
            +TLQLFQRTL ETL SFQKSIHED+R++H+E+LRQFH+Q ME+S +MNSILEN AEL+KE+K+L KEN
Sbjct:  710 FTLQLFQRTLEETLDSFQKSIHEDMRSLHIEILRQFHMQEMELSGVMNSILENQAELMKEIKSLGKEN 777          
BLAST of FG538671 vs. TrEMBL
Match: D7LZ27_ARALY (Transducin family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_487399 PE=4 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.578e-21
Identity = 49/75 (65.33%), Postives = 64/75 (85.33%), Query Frame = 1
Query:    1 YTLQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKENEQLRQLL 225
            +TLQLFQRTL  TL SFQ SIH+DVRN+H+E+LRQFH+  MEMS +++SILEN AE +KE+K LRKEN++L++ L
Sbjct:  706 FTLQLFQRTLEGTLDSFQNSIHDDVRNLHIEILRQFHMHEMEMSKVLSSILENQAEQMKELKLLRKENQELKERL 780          
BLAST of FG538671 vs. TrEMBL
Match: A9RBJ3_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_111001 PE=4 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 6.103e-21
Identity = 50/74 (67.57%), Postives = 64/74 (86.49%), Query Frame = 1
Query:    1 YTLQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKENEQLRQL 222
            + LQL QR L E+LG+ Q++IHE+V+NVHLE+LRQFH+Q MEMS+MM+S LE  AELV+EVKALR+EN+QLR L
Sbjct:  716 FALQLVQRGLEESLGAVQRAIHEEVQNVHLELLRQFHIQQMEMSSMMDSFLEKQAELVEEVKALRRENQQLRDL 789          
BLAST of FG538671 vs. TrEMBL
Match: A9RFH7_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_65425 PE=4 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.374e-19
Identity = 46/74 (62.16%), Postives = 62/74 (83.78%), Query Frame = 1
Query:    1 YTLQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKENEQLRQL 222
            + LQL QR L E+LG+ Q++IHE+V+++HLE+LRQFH+Q MEMS+MM S L   AELV+E+KALR+EN+QLR L
Sbjct:  660 FALQLVQRGLEESLGAVQRAIHEEVQSLHLELLRQFHIQQMEMSSMMESFLARQAELVEEIKALRRENQQLRDL 733          
BLAST of FG538671 vs. SwissProt
Match: NEDD1_MOUSE (Protein NEDD1 OS=Mus musculus GN=Nedd1 PE=2 SV=2)

HSP 1 Score: 55.0694 bits (131), Expect = 2.532e-7
Identity = 25/70 (35.71%), Postives = 46/70 (65.71%), Query Frame = 1
Query:    7 LQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKENEQLR 216
            ++  Q  + ETL  F+++ H D+ N+ +E+++QFH+Q  EM +++     N   LV E++ LR+EN++LR
Sbjct:  589 IRFIQNMIQETLDDFREACHRDIVNLQVEMIKQFHIQLNEMHSLLERYSVNEG-LVAEIERLREENKRLR 657          
BLAST of FG538671 vs. SwissProt
Match: NEDD1_HUMAN (Protein NEDD1 OS=Homo sapiens GN=NEDD1 PE=1 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 2.532e-7
Identity = 25/70 (35.71%), Postives = 46/70 (65.71%), Query Frame = 1
Query:    7 LQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKENEQLR 216
            ++  Q  + ETL  F+++ H D+ N+ +E+++QFH+Q  EM +++     N   LV E++ LR+EN++LR
Sbjct:  589 IRFIQNMIQETLDDFREACHRDIVNLQVEMIKQFHMQLNEMHSLLERYSVNEG-LVAEIERLREENKRLR 657          
BLAST of FG538671 vs. SwissProt
Match: NEDD1_BOVIN (Protein NEDD1 OS=Bos taurus GN=NEDD1 PE=2 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 2.532e-7
Identity = 25/70 (35.71%), Postives = 46/70 (65.71%), Query Frame = 1
Query:    7 LQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKENEQLR 216
            ++  Q  + ETL  F+++ H D+ N+ +E+++QFH+Q  EM +++     N   LV E++ LR+EN++LR
Sbjct:  588 IRFIQNMIQETLDDFREACHRDIVNLQVEMIKQFHMQLNEMHSLLERYSVNEG-LVAEIERLREENKRLR 656          
BLAST of FG538671 vs. TAIR peptide
Match: AT5G05970.2 (| Symbols: NEDD1 | Transducin/WD40 repeat-like superfamily protein | chr5:1795464-1799313 FORWARD LENGTH=782)

HSP 1 Score: 107.071 bits (266), Expect = 6.035e-24
Identity = 51/75 (68.00%), Postives = 64/75 (85.33%), Query Frame = 1
Query:    1 YTLQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKENEQLRQLL 225
            +TLQLFQRTL  TL SFQ SIH+DVRN+H+E+LRQFH+  MEMS +++SILEN AE +KE+K LRKEN++LRQ L
Sbjct:  708 FTLQLFQRTLEGTLDSFQNSIHDDVRNLHIEILRQFHMHEMEMSKVLSSILENQAEQMKELKLLRKENQELRQRL 782          
BLAST of FG538671 vs. TAIR peptide
Match: AT5G05970.1 (| Symbols: NEDD1 | Transducin/WD40 repeat-like superfamily protein | chr5:1795464-1799313 FORWARD LENGTH=781)

HSP 1 Score: 107.071 bits (266), Expect = 6.035e-24
Identity = 51/75 (68.00%), Postives = 64/75 (85.33%), Query Frame = 1
Query:    1 YTLQLFQRTLNETLGSFQKSIHEDVRNVHLEVLRQFHLQGMEMSTMMNSILENHAELVKEVKALRKENEQLRQLL 225
            +TLQLFQRTL  TL SFQ SIH+DVRN+H+E+LRQFH+  MEMS +++SILEN AE +KE+K LRKEN++LRQ L
Sbjct:  707 FTLQLFQRTLEGTLDSFQNSIHDDVRNLHIEILRQFHMHEMEMSKVLSSILENQAEQMKELKLLRKENQELRQRL 781          
The following BLAST results are available for this feature:
BLAST of FG538671 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9HMM7_POPTR1.404e-2574.67Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7TLM2_VITVI6.966e-2572.00Whole genome shotgun sequence of line PN40024, sca... [more]
B9SE21_RICCO9.098e-2572.00Putative uncharacterized protein OS=Ricinus commun... [more]
Q9FI89_ARATH7.209e-2268.00Similarity to regulatory protein Nedd1 OS=Arabidop... [more]
B6EUA6_ARATH7.209e-2268.00Putative uncharacterized protein At5g05970.1 OS=Ar... [more]
B3H5K9_ARATH7.209e-2268.00Uncharacterized protein At5g05970.2 OS=Arabidopsis... [more]
B9HT53_POPTR9.415e-2273.53Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7LZ27_ARALY3.578e-2165.33Transducin family protein OS=Arabidopsis lyrata su... [more]
A9RBJ3_PHYPA6.103e-2167.57Predicted protein OS=Physcomitrella patens subsp. ... [more]
A9RFH7_PHYPA4.374e-1962.16Predicted protein OS=Physcomitrella patens subsp. ... [more]
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BLAST of FG538671 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
NEDD1_MOUSE2.532e-735.71Protein NEDD1 OS=Mus musculus GN=Nedd1 PE=2 SV=2[more]
NEDD1_HUMAN2.532e-735.71Protein NEDD1 OS=Homo sapiens GN=NEDD1 PE=1 SV=1[more]
NEDD1_BOVIN2.532e-735.71Protein NEDD1 OS=Bos taurus GN=NEDD1 PE=2 SV=1[more]
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BLAST of FG538671 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G05970.26.035e-2468.00| Symbols: NEDD1 | Transducin/WD40 repeat-like sup... [more]
AT5G05970.16.035e-2468.00| Symbols: NEDD1 | Transducin/WD40 repeat-like sup... [more]
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Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG538671 ID=FG538671; Name=FG538671; organism=Pisum sativum; type=EST; length=533bp
TATACACTTCAACTTTTTCAGCGGACATTGAATGAAACTCTAGGTTCCTT
TCAGAAATCTATACATGAGGATGTGAGAAACGTCCATCTTGAAGTATTAA
GACAGTTTCATCTGCAAGGGATGGAAATGTCAACCATGATGAACTCAATT
CTGGAAAATCACGCCGAGTTAGTGAAAGAAGTGAAGGCTCTGCGTAAGGA
AAACGAGCAGCTTAGACAGTTGCTTTGATCGGTGTGAATAAGGTCGCTAC
ATTTTTCTGACAGCGTCTTTACCCCGTGGGGTCTGTTTTATCCTTTGCAG
ACTAGCAATTTATCTTTGATTTGTGACACGCAATTGGGTTTCAGCTTTTT
GATAGTGGTGGTTGGGAAAAAAAATCACAAGTGAATCGCATGTTACTGGA
ATAGGTATTGAAAATGTATATAGGTGATTTTTTAATTATGGAATCTATTT
GTTGGTGATCTATATTTTGCAGATTATATATTTGTGGAATAAGTATATAA
ATTTAAAATGTGATGATTTGTCAGATATATACT
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