FG529029

EST Overview
NameFG529029
Unique NameFG529029
TypeEST
OrganismPisum sativum (pea)
Sequence length359
Libraries
Library NameType
LIBEST_023214 MeriC Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
[Close]
BLAST of FG529029 vs. TrEMBL
Match: B9TAH1_RICCO (Receptor kinase, putative OS=Ricinus communis GN=RCOM_2032810 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.944e-8
Identity = 28/52 (53.85%), Postives = 33/52 (63.46%), Query Frame = 3 
Query:    3 ALTCTAVAPDQRPKMSHVVKKIEELRGVGVSPCHDTXXXXXXXXXXXXXACG 158
            A+ CTA  PDQRP++SHVVK IEE+RGV VSPCH+T              CG
Sbjct:  206 AMACTASPPDQRPRISHVVKMIEEMRGVEVSPCHETYDSVSDSPCVSEDTCG 257
[Close]
BLAST of FG529029 vs. TrEMBL
Match: B9HWF1_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_225428 PE=4 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.255e-7
Identity = 24/36 (66.67%), Postives = 29/36 (80.56%), Query Frame = 3 
Query:    3 ALTCTAVAPDQRPKMSHVVKKIEELRGVGVSPCHDT 110
            AL CT  +PD RP+M HVV+ IEE+RGV +SPCHDT
Sbjct:  626 ALACTTPSPDHRPRMGHVVRMIEEIRGVEMSPCHDT 661
[Close]
BLAST of FG529029 vs. TAIR peptide
Match: AT1G68400.1 (| Symbols: | leucine-rich repeat transmembrane protein kinase family protein | chr1:25646401-25648916 REVERSE LENGTH=670)

HSP 1 Score: 53.1434 bits (126), Expect = 4.076e-8
Identity = 27/59 (45.76%), Postives = 33/59 (55.93%), Query Frame = 3 
Query:    3 ALTCTAVAPDQRPKMSHVVKKIEELRGVG--VSPCHDTXXXXXXXXXXXXXACGGVLTK 173
            A+ CTAVA D RPKM HVVK IE++RG G   SPC+D               CGG  ++
Sbjct:  612 AMACTAVAADHRPKMGHVVKLIEDIRGGGSEASPCNDGINSAVDSPCLSEDTCGGTTSQ 670
The following BLAST results are available for this feature:
BLAST of FG529029 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
B9TAH1_RICCO2.944e-853.85Receptor kinase, putative OS=Ricinus communis GN=R... [more]
B9HWF1_POPTR3.255e-766.67Predicted protein (Fragment) OS=Populus trichocarp... [more]
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BLAST of FG529029 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G68400.14.076e-845.76| Symbols: | leucine-rich repeat transmembrane pr... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 37..49
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG529029 ID=FG529029; Name=FG529029; organism=Pisum sativum; type=EST; length=359bp
TTGCTTTGACGTGTACTGCGGTTGCACCAGATCAACGGCCCAAGATGAGC
CACGTGGTCAAGAAGATTGAGGAGTTGCGTGGGGTCGGCGTGTCTCCGTG
TCATGACACGTTGGACTCTGTTTCTGAGTCACTTTCTGTGTCTGAAGATG
CATGTGGTGGGGTACTCACTAAATTTTAGCGGATTCAACCAAATTATTAT
TAGCTTGTCTTTTCTCTTACCTACAAATTTGAGTCCCTTATTTATATCTT
TTGGTTTTAATTTAAGGTTGCAGCTATGGCTGTTAATATGCTACAAACCT
ACTATATATTATGATGAAATACTGACAAATGTAGTTGTTGCCACCCACAC
TTTAAAATT
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