FG530650

EST Overview
NameFG530650
Unique NameFG530650
TypeEST
OrganismPisum sativum (pea)
Sequence length689
Libraries
Library NameType
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of FG530650 vs. TrEMBL
Match: B9HUM7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1090119 PE=4 SV=1)

HSP 1 Score: 347.436 bits (890), Expect = 6.144e-94
Identity = 175/229 (76.42%), Postives = 202/229 (88.21%), Query Frame = 3
Query:    3 TMQDEEEHARLRASSLILPSINTSELSAEAGTLGETLDADAKWGKTLDERHEQKVMREVEQLRHAKLVRKLEDKLSLAERKMMRAEKALMKVEVSLKPSENRADSESITDEERFMFRKLGLRMKAFLLMGRRGVFDGTIENMHLHWKYRELVKIIAKANNFEQVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYKRPSMLRPKNLLTKRKALARFIELQRHEAL 689
            ++QDEEE ARLRAS+L++PS    E S  AG+L ETLDADAKWGK LD+ H++K++RE E +RHA +VR+LE KL+ A+RK+ RAE+ L KVE  LKPSE +AD ESITDEERFMFRKLGLRMKAFLL+GRRGVFDGT+ENMHLHWKYRELVKII KA +FEQVKKIALALEAESGGVLVSVDK+SKGY+I+VYRGKDY+RPSMLRPKNLLTKRKALAR IE+QR EAL
Sbjct:  527 SLQDEEEQARLRASALVIPSDEIMEESGIAGSLEETLDADAKWGKRLDDCHKEKIIREAEIVRHASIVRRLEKKLAFAQRKLRRAERTLNKVEGFLKPSERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIILKAKSFEQVKKIALALEAESGGVLVSVDKISKGYAIIVYRGKDYQRPSMLRPKNLLTKRKALARSIEIQRSEAL 755          
BLAST of FG530650 vs. TrEMBL
Match: B9RTE8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0909010 PE=4 SV=1)

HSP 1 Score: 342.813 bits (878), Expect = 1.513e-92
Identity = 172/229 (75.11%), Postives = 198/229 (86.46%), Query Frame = 3
Query:    3 TMQDEEEHARLRASSLILPSINTSELSAEAGTLGETLDADAKWGKTLDERHEQKVMREVEQLRHAKLVRKLEDKLSLAERKMMRAEKALMKVEVSLKPSENRADSESITDEERFMFRKLGLRMKAFLLMGRRGVFDGTIENMHLHWKYRELVKIIAKANNFEQVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYKRPSMLRPKNLLTKRKALARFIELQRHEAL 689
            ++QD+EE ARLRAS+L + +  T E    AGTL ETLDADA+WGK LD+ H +K+MRE E  RHA LVRKLE KL+ AE+K+M+AE+AL KVEV LKP+E +AD ESITDEERFMFRKLGLRMKAFLL+GRRGVFDGT+ENMHLHWKYRELVKII KA N EQVKKIALALEAESGG+LVSVD+VSKGY+I+V+RGKDY+RPS LRP NLLTKRKALAR IE+QR EAL
Sbjct:  419 SLQDKEEQARLRASALFVQTAETLEQPGTAGTLEETLDADARWGKCLDQNHREKIMREAEIARHANLVRKLESKLAFAEKKLMKAERALSKVEVFLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIILKAKNIEQVKKIALALEAESGGILVSVDRVSKGYAIIVFRGKDYQRPSKLRPGNLLTKRKALARSIEIQRSEAL 647          
BLAST of FG530650 vs. TrEMBL
Match: D7T793_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_20.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018109001 PE=4 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 2.416e-90
Identity = 169/228 (74.12%), Postives = 196/228 (85.96%), Query Frame = 3
Query:    6 MQDEEEHARLRASSLILPSINTSELSAEAGTLGETLDADAKWGKTLDERHEQKVMREVEQLRHAKLVRKLEDKLSLAERKMMRAEKALMKVEVSLKPSENRADSESITDEERFMFRKLGLRMKAFLLMGRRGVFDGTIENMHLHWKYRELVKIIAKANNFEQVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYKRPSMLRPKNLLTKRKALARFIELQRHEAL 689
            +QDEEE ARLRAS+LI P++  +E    AGTLGETL+ADA+WGK LD+  +QK++++ E  RHA LVRKLE +L+LAERK+M+AE AL KVE  LKP+   AD ESITDEERFMFRKLGLRMKAFLL+GRRGVF GT+ENMHLHWKYRELVKII KA  F+QVKK ALALE+ESGGVLVSVDKVSKG++I+V+RGKDY+RPS LRPKNLLTKRKALAR IELQR EAL
Sbjct:  539 LQDEEEQARLRASTLITPTVGITEQVGSAGTLGETLEADARWGKRLDDHDKQKMLKKAEVARHANLVRKLERRLALAERKLMKAENALSKVEEFLKPANRPADPESITDEERFMFRKLGLRMKAFLLLGRRGVFSGTVENMHLHWKYRELVKIIVKAKTFDQVKKTALALESESGGVLVSVDKVSKGFAIVVFRGKDYQRPSTLRPKNLLTKRKALARSIELQRREAL 766          
BLAST of FG530650 vs. TrEMBL
Match: A5C045_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010525 PE=4 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 2.416e-90
Identity = 169/228 (74.12%), Postives = 196/228 (85.96%), Query Frame = 3
Query:    6 MQDEEEHARLRASSLILPSINTSELSAEAGTLGETLDADAKWGKTLDERHEQKVMREVEQLRHAKLVRKLEDKLSLAERKMMRAEKALMKVEVSLKPSENRADSESITDEERFMFRKLGLRMKAFLLMGRRGVFDGTIENMHLHWKYRELVKIIAKANNFEQVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYKRPSMLRPKNLLTKRKALARFIELQRHEAL 689
            +QDEEE ARLRAS+LI P++  +E    AGTLGETL+ADA+WGK LD+  +QK++++ E  RHA LVRKLE +L+LAERK+M+AE AL KVE  LKP+   AD ESITDEERFMFRKLGLRMKAFLL+GRRGVF GT+ENMHLHWKYRELVKII KA  F+QVKK ALALE+ESGGVLVSVDKVSKG++I+V+RGKDY+RPS LRPKNLLTKRKALAR IELQR EAL
Sbjct:  539 LQDEEEQARLRASTLITPTVGITEQVGSAGTLGETLEADARWGKRLDDHDKQKMLKKAEVARHANLVRKLERRLALAERKLMKAENALSKVEEFLKPANRPADPESITDEERFMFRKLGLRMKAFLLLGRRGVFSGTVENMHLHWKYRELVKIIVKAKTFDQVKKTALALESESGGVLVSVDKVSKGFAIVVFRGKDYQRPSTLRPKNLLTKRKALARSIELQRREAL 766          
BLAST of FG530650 vs. TrEMBL
Match: Q9LS85_ARATH (Emb|CAB10230.1 OS=Arabidopsis thaliana GN=At3g23070 PE=4 SV=1)

HSP 1 Score: 331.643 bits (849), Expect = 3.489e-89
Identity = 170/231 (73.59%), Postives = 194/231 (83.98%), Query Frame = 3
Query:    3 TMQDEEEHARLRASS-LILPSINTSELSAEAGTLGETLDADAKWGKTLDER-HEQKVMREVEQLRHAKLVRKLEDKLSLAERKMMRAEKALMKVEVSLKPSENRADSESITDEERFMFRKLGLRMKAFLLMGRRGVFDGTIENMHLHWKYRELVKIIAKANNFEQVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYKRPSMLRPKNLLTKRKALARFIELQRHEAL 689
            T+QDEEE ARLR SS LI+PS   +     AGTLGETLDA  KWGK LD+  H  +V +EVE LRH  LVRKLE KL+ AERK+++AE+ L KVEV LKP+E R D ESITDEERFMFRKLGL+MKAFLL+GRRGVFDGT+ENMHLHWKYRELVKII KA  F+ VKK+ALALEAESGG+LVS+DKV+KGY+I+VYRG+DYKRP+MLRPKNLLTKRKALAR IELQR E L
Sbjct:  498 TLQDEEEQARLRGSSALIVPSTEPANKLVSAGTLGETLDATGKWGKNLDDDDHSDEVKQEVEILRHENLVRKLERKLAFAERKLLKAERGLAKVEVCLKPAEQREDPESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDGVKKVALALEAESGGILVSIDKVTKGYAIIVYRGQDYKRPTMLRPKNLLTKRKALARSIELQRREGL 728          
BLAST of FG530650 vs. TrEMBL
Match: D7L2J2_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_898801 PE=4 SV=1)

HSP 1 Score: 329.331 bits (843), Expect = 1.732e-88
Identity = 169/231 (73.16%), Postives = 193/231 (83.55%), Query Frame = 3
Query:    3 TMQDEEEHARLRASS-LILPSINTSELSAEAGTLGETLDADAKWGKTLDER-HEQKVMREVEQLRHAKLVRKLEDKLSLAERKMMRAEKALMKVEVSLKPSENRADSESITDEERFMFRKLGLRMKAFLLMGRRGVFDGTIENMHLHWKYRELVKIIAKANNFEQVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYKRPSMLRPKNLLTKRKALARFIELQRHEAL 689
            T+QDEEE ARLR SS LI+P I   +    AGTLGETLDA  KWGK LD+  H  +V +EVE LRH  LVRKLE KL+ AERK+++AE+ L KVE  LKP+E R D +SITDEERFMFRKLGL+MKAFLL+GRRGVFDGT+ENMHLHWKYRELVKII KA  F+ VKK+ALALEAESGG+LVS+DKV+KGY+I+VYRGKDYKRP+MLRPKNLLTKRKALAR IELQR E L
Sbjct:  524 TLQDEEEQARLRGSSALIVPCIEPPKKLVSAGTLGETLDATGKWGKNLDDDDHSDEVKQEVEILRHENLVRKLERKLAFAERKLLKAERGLAKVEECLKPAEQREDPDSITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDGVKKVALALEAESGGILVSIDKVTKGYAIIVYRGKDYKRPTMLRPKNLLTKRKALARSIELQRREGL 754          
BLAST of FG530650 vs. TrEMBL
Match: D7MH09_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_330061 PE=4 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 1.517e-84
Identity = 156/230 (67.83%), Postives = 196/230 (85.22%), Query Frame = 3
Query:    3 TMQDEEEHARLRASSLILPSINTSELSAEAGTLGETLDADAKWGKTLD-ERHEQKVMREVEQLRHAKLVRKLEDKLSLAERKMMRAEKALMKVEVSLKPSENRADSESITDEERFMFRKLGLRMKAFLLMGRRGVFDGTIENMHLHWKYRELVKIIAKANNFEQVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYKRPSMLRPKNLLTKRKALARFIELQRHEAL 689
            T+QDEE+ +R   S+L++PS   ++    AGTLGETLDA  KWGK+LD + H +++ +EVE++R AKLVRKLE KL+ AE+K+++AE+AL KVE SLKP+E R D E IT+EERFMF+KLGLRMKAFLL+GRRGVFDGT+ENMHLHWKYREL+KI+ KA + E  KK+A+ALEAESGG+LVSVDK+SKGY+++VYRGKDYKRP+ LRPKNLLTKRKALAR +ELQ+ EAL
Sbjct:  564 TLQDEEKQSR--PSTLVVPSTKANQNLVSAGTLGETLDATGKWGKSLDNDDHVEEMKQEVERMRSAKLVRKLERKLAFAEKKLLKAERALAKVEESLKPAEQRTDLEGITEEERFMFQKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELIKILVKAKSLEGAKKVAMALEAESGGILVSVDKISKGYAVIVYRGKDYKRPTTLRPKNLLTKRKALARSLELQKREAL 791          
BLAST of FG530650 vs. TrEMBL
Match: O23307_ARATH (Putative uncharacterized protein AT4g14510 OS=Arabidopsis thaliana GN=dl3295c PE=2 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 4.414e-84
Identity = 156/230 (67.83%), Postives = 194/230 (84.35%), Query Frame = 3
Query:    3 TMQDEEEHARLRASSLILPSINTSELSAEAGTLGETLDADAKWGKTLD-ERHEQKVMREVEQLRHAKLVRKLEDKLSLAERKMMRAEKALMKVEVSLKPSENRADSESITDEERFMFRKLGLRMKAFLLMGRRGVFDGTIENMHLHWKYRELVKIIAKANNFEQVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYKRPSMLRPKNLLTKRKALARFIELQRHEAL 689
            T+QD+EE AR   S+L+LPS   ++    AGTLGETLDA  KWGK LD + H +++ +EVE++R AKLVRKLE KL+ AE+K+++AE+AL KVE SLKP+E R D E IT+EERFMF+KLGL+MKAFLL+GRRGVFDGT+ENMHLHWKYREL+KI+ KA   E  +K+A+ALEAESGG+LVSVDK+SKGY+++VYRGKDYKRP+ LRPKNLLTKRKALAR +ELQ+ EAL
Sbjct:  570 TLQDKEEQAR--PSALVLPSTKANQNLVSAGTLGETLDATGKWGKNLDNDDHVEEMKQEVEKVRSAKLVRKLERKLAFAEKKLLKAERALAKVEESLKPAEQRTDLEGITEEERFMFQKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELIKILVKAKTLEGAQKVAMALEAESGGILVSVDKISKGYAVIVYRGKDYKRPTTLRPKNLLTKRKALARSLELQKREAL 797          
BLAST of FG530650 vs. TrEMBL
Match: C5Y5D8_SORBI (Putative uncharacterized protein Sb05g022980 OS=Sorghum bicolor GN=Sb05g022980 PE=4 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 2.267e-80
Identity = 158/229 (69.00%), Postives = 191/229 (83.41%), Query Frame = 3
Query:    3 TMQDEEEHARLRASSLILPSINTSELSAEAGTLGETLDADAKWGKTLDERHEQKVMREVEQLRHAKLVRKLEDKLSLAERKMMRAEKALMKVEVSLKPSENRADSESITDEERFMFRKLGLRMKAFLLMGRRGVFDGTIENMHLHWKYRELVKIIAKANNFEQVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYKRPSMLRPKNLLTKRKALARFIELQRHEAL 689
            ++QDEEE AR +A+S    S         AGTLGETL+A++K+G  LDE HE K+ R VE  RHA LVRKLE KLSLA++KM +AE+ L KVE +L+P+E+ +  E+ITDEERFMFRKLGLRMKAFLL+GRRGVFDGTIENMHLHWKYRELVKI+ KA +F  VK+IAL+LEAESGG+LVSVDKVSKGY+I+V+RGK+Y+RPS LRP+NLL+KRKALAR IELQRH+AL
Sbjct:  484 SLQDEEE-ARRKAASYFSSSAEKYVQPTVAGTLGETLEANSKYGTKLDENHEDKMARTVEAARHADLVRKLEWKLSLAQKKMEKAERVLGKVETALRPTED-SRPETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFADVKRIALSLEAESGGILVSVDKVSKGYAIVVFRGKNYRRPSSLRPRNLLSKRKALARSIELQRHQAL 710          
BLAST of FG530650 vs. TrEMBL
Match: A7XN92_MAIZE (CRM family member 3 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 1.469e-79
Identity = 155/229 (67.69%), Postives = 186/229 (81.22%), Query Frame = 3
Query:    3 TMQDEEEHARLRASSLILPSINTSELSAEAGTLGETLDADAKWGKTLDERHEQKVMREVEQLRHAKLVRKLEDKLSLAERKMMRAEKALMKVEVSLKPSENRADSESITDEERFMFRKLGLRMKAFLLMGRRGVFDGTIENMHLHWKYRELVKIIAKANNFEQVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYKRPSMLRPKNLLTKRKALARFIELQRHEAL 689
            ++QDEEE  R  AS     S  T      AGTLGETL+A++K+G   DE H  K+ R +E  RHA LVRKLE KLSLA++KM +AE+ L KVE +L+P+E+    E+ITDEERFMFRKLGLRMKAFLL+GRRGVFDGTIENMHLHWKYRELVKI+ KA +F  VK+IAL+LEAESGG+LVSVDKVSKGY+I+V+RGK+Y+RPS LRP+NLL+KRKALAR IELQRH+AL
Sbjct:  479 SLQDEEEARRKAAS--YFSSAETYAQPTVAGTLGETLEANSKYGTKHDENHADKMARTIEAARHADLVRKLEWKLSLAQKKMEKAERVLGKVETALRPTEDSRPPETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFADVKRIALSLEAESGGILVSVDKVSKGYAIVVFRGKNYRRPSSLRPRNLLSKRKALARSIELQRHQAL 705          
BLAST of FG530650 vs. SwissProt
Match: CRS1_MAIZE (Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Zea mays GN=CRS1 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.156e-43
Identity = 95/227 (41.85%), Postives = 143/227 (63.00%), Query Frame = 3
Query:    9 QDEEEHARLRASSLILPSINTSELSAEAGTLGETLDADAKWGKTLDERHEQKVMREVEQLRHAKLVRKLEDKLSLAERKMMRAEKALMKVEVSLKPSENRADSESITDEERFMFRKLGLRMKAFLLMGRRGVFDGTIENMHLHWKYRELVKIIAKANNFEQVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYKRPSMLRPKNLLTKRKALARFIELQRHEAL 689
            Q +EE ARL+A   +      SE S+  GT  E     AK+     E     +  E E+ R  K ++  E KLS+  +K+ R+ +AL K+  S  PSE  AD E +T+EE+ MFR++G +M   +L+GRRG+FDG IE +H HWK++E+VK+I K N   Q+   A  LE E+GG+L++V+K++  ++I++YRGK+Y+RP+     NLLTKR+AL R IE+QR  ++
Sbjct:  460 QVKEEEARLKAVDSLQMVGELSEESS-LGTFREYQGFHAKFVHENTENSNTMIELEAEKYRLEKELKDHEWKLSVLNKKIERSNQALAKLHSSWSPSEQSADREHLTEEEKIMFRRIGRKMDGLVLLGRRGIFDGVIEEIHQHWKHKEVVKVITKQNQTRQIMYAASLLEVETGGILIAVEKLTTSHAIILYRGKNYRRPAKSSFSNLLTKREALRRSIEVQRRGSM 685          
BLAST of FG530650 vs. SwissProt
Match: CRS1_ORYSJ (Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0360100 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.636e-41
Identity = 86/227 (37.89%), Postives = 142/227 (62.56%), Query Frame = 3
Query:    9 QDEEEHARLRASSLILPSINTSELSAEAGTLGETLDADAKWGKTLDERHEQKVMREVEQLRHAKLVRKLEDKLSLAERKMMRAEKALMKVEVSLKPSENRADSESITDEERFMFRKLGLRMKAFLLMGRRGVFDGTIENMHLHWKYRELVKIIAKANNFEQVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYKRPSMLRPKNLLTKRKALARFIELQRHEAL 689
            Q +EE ARL+ +  +   +  S   +  GT  E  D      +   E +  ++  E ++ R  K ++  E +LS+  +K+ R+ + L K+  S  PS+   D E +T+EER +FRK+GL+M   +L+GRRGVF+G IE +H HWK++E+VK+I K N   Q+   ++ LE E+GG L+++++ +  ++I++YRGK+Y+RP+   P NLLTKR+AL R IE+QR  ++
Sbjct:  462 QAKEEEARLKMADSLQMIVGLSSERSYVGTFREYQDFHDSHARRTTENNF-RIQLEAKKHRLEKELKDQEWRLSMLTKKIERSNQVLAKLHSSWSPSKKDGDRELLTEEERRIFRKIGLKMDEHVLLGRRGVFEGVIEEIHQHWKHKEVVKVITKQNQASQITYTSMMLEVETGGTLIAIERFTTSHAIILYRGKNYRRPTKSAPSNLLTKREALQRSIEVQRRGSM 687          
BLAST of FG530650 vs. SwissProt
Match: CRS1_ARATH (Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Arabidopsis thaliana GN=At5g16180 PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.224e-38
Identity = 88/198 (44.44%), Postives = 131/198 (66.16%), Query Frame = 3
Query:   87 EAGTLGETLDADAKWGKTLDERHEQKVMREVEQLRHAKLVRKLEDKLSLAERKMMRAEKALMKVEVSLKPSENRADSESITDEERFMFRKLGLRMKAFLLMGRRGVFDGTIENMHLHWKYRELVKIIAKANNFEQVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYKRP-SMLRPKNLLTKRKALARFIELQR 677
            ++GTL E  +   K+G+ +D R+ +    E E+ R  K ++  E KLS+ + K+ ++   L K+    KPSE   D E +T+EER   R++GL+M + L++GRRGVF G +E +H HWK+RE+ K+I     F +V   A ALE ES GVL+S++K+ +G++IL+YRGK+YKRP S L  +NLLTKRKAL R + +QR
Sbjct:  495 KSGTLLEFQELQRKFGE-MDPRNLET---EAEKARLEKELKSQEHKLSILKSKIEKSNMELFKLNSLWKPSEGDDDIEILTNEERECLRRIGLKMNSSLVLGRRGVFFGVMEGLHQHWKHREVAKVITMQKLFSRVVYTAKALETESNGVLISIEKLKEGHAILIYRGKNYKRPSSKLMAQNLLTKRKALQRSVVMQR 688          
BLAST of FG530650 vs. SwissProt
Match: Y3544_ARATH (Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana GN=At3g25440 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.741e-22
Identity = 56/151 (37.09%), Postives = 96/151 (63.58%), Query Frame = 3
Query:  216 EDKLSLAERKMMRAEKALMKVEVSLKPSENRA---DSESITDEERFMFRKLGLRMKAFLLMGRRGVFDGTIENMHLHWKYRELVKIIAKANNFEQVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYKRP--SMLRPKNLLTKRKAL 653
            E+K+    RK  + E+ LM+    L+PSE+     D E +T EE F + K+GL+ K ++ +GRRG++ G I NMHLHWK  + ++++ K    ++VK+IA+ L   +GG+++    V +G +I++YRGK+Y +P   ++ P+  L ++KAL
Sbjct:  138 EEKILNKLRKARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLD---VHEGNTIIMYRGKNYVQPPTEIMSPRITLPRKKAL 285          
BLAST of FG530650 vs. TAIR peptide
Match: AT3G23070.1 (| Symbols: ATCFM3A, CFM3A | CRM family member 3A | chr3:8203548-8207243 FORWARD LENGTH=881)

HSP 1 Score: 331.643 bits (849), Expect = 2.373e-91
Identity = 170/231 (73.59%), Postives = 194/231 (83.98%), Query Frame = 3
Query:    3 TMQDEEEHARLRASS-LILPSINTSELSAEAGTLGETLDADAKWGKTLDER-HEQKVMREVEQLRHAKLVRKLEDKLSLAERKMMRAEKALMKVEVSLKPSENRADSESITDEERFMFRKLGLRMKAFLLMGRRGVFDGTIENMHLHWKYRELVKIIAKANNFEQVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYKRPSMLRPKNLLTKRKALARFIELQRHEAL 689
            T+QDEEE ARLR SS LI+PS   +     AGTLGETLDA  KWGK LD+  H  +V +EVE LRH  LVRKLE KL+ AERK+++AE+ L KVEV LKP+E R D ESITDEERFMFRKLGL+MKAFLL+GRRGVFDGT+ENMHLHWKYRELVKII KA  F+ VKK+ALALEAESGG+LVS+DKV+KGY+I+VYRG+DYKRP+MLRPKNLLTKRKALAR IELQR E L
Sbjct:  529 TLQDEEEQARLRGSSALIVPSTEPANKLVSAGTLGETLDATGKWGKNLDDDDHSDEVKQEVEILRHENLVRKLERKLAFAERKLLKAERGLAKVEVCLKPAEQREDPESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDGVKKVALALEAESGGILVSIDKVTKGYAIIVYRGQDYKRPTMLRPKNLLTKRKALARSIELQRREGL 759          
BLAST of FG530650 vs. TAIR peptide
Match: AT4G14510.1 (| Symbols: ATCFM3B, CFM3B | CRM family member 3B | chr4:8337390-8341057 REVERSE LENGTH=907)

HSP 1 Score: 314.694 bits (805), Expect = 3.002e-86
Identity = 156/230 (67.83%), Postives = 194/230 (84.35%), Query Frame = 3
Query:    3 TMQDEEEHARLRASSLILPSINTSELSAEAGTLGETLDADAKWGKTLD-ERHEQKVMREVEQLRHAKLVRKLEDKLSLAERKMMRAEKALMKVEVSLKPSENRADSESITDEERFMFRKLGLRMKAFLLMGRRGVFDGTIENMHLHWKYRELVKIIAKANNFEQVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYKRPSMLRPKNLLTKRKALARFIELQRHEAL 689
            T+QD+EE AR   S+L+LPS   ++    AGTLGETLDA  KWGK LD + H +++ +EVE++R AKLVRKLE KL+ AE+K+++AE+AL KVE SLKP+E R D E IT+EERFMF+KLGL+MKAFLL+GRRGVFDGT+ENMHLHWKYREL+KI+ KA   E  +K+A+ALEAESGG+LVSVDK+SKGY+++VYRGKDYKRP+ LRPKNLLTKRKALAR +ELQ+ EAL
Sbjct:  559 TLQDKEEQAR--PSALVLPSTKANQNLVSAGTLGETLDATGKWGKNLDNDDHVEEMKQEVEKVRSAKLVRKLERKLAFAEKKLLKAERALAKVEESLKPAEQRTDLEGITEEERFMFQKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELIKILVKAKTLEGAQKVAMALEAESGGILVSVDKISKGYAVIVYRGKDYKRPTTLRPKNLLTKRKALARSLELQKREAL 786          
BLAST of FG530650 vs. TAIR peptide
Match: AT3G18390.1 (| Symbols: EMB1865 | CRS1 / YhbY (CRM) domain-containing protein | chr3:6313572-6317584 FORWARD LENGTH=848)

HSP 1 Score: 235.728 bits (600), Expect = 1.772e-62
Identity = 119/228 (52.19%), Postives = 165/228 (72.37%), Query Frame = 3
Query:    6 MQDEEEHARLRASSLILPSINTSELSAEAGTLGETLDADAKWGKTLDERHEQKVMREVEQLRHAKLVRKLEDKLSLAERKMMRAEKALMKVEVSLKPSENRADSESITDEERFMFRKLGLRMKAFLLMGRRGVFDGTIENMHLHWKYRELVKIIAKANNFEQVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYKRPSMLRPKNLLTKRKALARFIELQRHEAL 689
            +QD EE  R R    + P     ++ AEAGTL E  +A A+WGK +   H +K++ E  ++ +A++V++++ KL+LA+ K  RAEK L K+E S+ P+    D E I++EER MFRK+GL+MKA+L +G RGVFDG IENMHLHWK+RELVK+I+K  N   V++ A  LE ESGGVLV+++KV KG++++ YRGK+Y+RP  LRP+NLLTK KAL R I +QRHEAL
Sbjct:  549 IQDVEERVRNREIEAVQPV--GDKVPAEAGTLAEFYEAQARWGKEITPDHREKMIEEASRVANARVVKRIQHKLNLAQSKFQRAEKLLSKIEASMIPNGPDYDQEVISEEERAMFRKVGLKMKAYLPIGIRGVFDGVIENMHLHWKHRELVKLISKQKNQAFVEETARLLEYESGGVLVAIEKVPKGFALIYYRGKNYRRPISLRPRNLLTKAKALKRSIAMQRHEAL 774          
BLAST of FG530650 vs. TAIR peptide
Match: AT4G29750.1 (| Symbols: | CRS1 / YhbY (CRM) domain-containing protein | chr4:14569728-14572962 FORWARD LENGTH=841)

HSP 1 Score: 228.794 bits (582), Expect = 2.166e-60
Identity = 119/230 (51.74%), Postives = 160/230 (69.57%), Query Frame = 3
Query:    6 MQDEEEHARLRASS--LILPSINTSELSAEAGTLGETLDADAKWGKTLDERHEQKVMREVEQLRHAKLVRKLEDKLSLAERKMMRAEKALMKVEVSLKPSENRADSESITDEERFMFRKLGLRMKAFLLMGRRGVFDGTIENMHLHWKYRELVKIIAKANNFEQVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYKRPSMLRPKNLLTKRKALARFIELQRHEAL 689
            +Q +E+ AR  AS+   +     + +    AGTL ET+ A ++W         +++ RE   ++ A L+R LE +L   ++K+ RAE+ L KV+  L PSE   DSE IT+EER ++RK+GL M  FLL+GRR V+DGTIENMHLHWK+RELVK+I +  +  QVK IA++LEAESGGVLVSVDK  KGY+I++YRGK+Y+ P  LRP NLLT++KA AR IELQR EAL
Sbjct:  539 LQAKEDQAREMASTRATLTSQAKSPKTQLLAGTLAETIAASSRWAPNASSVDIEELKRESASIKRAALIRDLELRLLYGKQKLRRAERDLAKVQKDLDPSELPTDSEIITEEERLLYRKIGLSMDPFLLLGRREVYDGTIENMHLHWKHRELVKVIVRGKSLPQVKHIAISLEAESGGVLVSVDKTMKGYAIILYRGKNYQMPFRLRPSNLLTRKKAFARSIELQRREAL 768          
BLAST of FG530650 vs. TAIR peptide
Match: AT3G01370.1 (| Symbols: ATCFM2, CFM2 | CRM family member 2 | chr3:139033-143477 FORWARD LENGTH=1011)

HSP 1 Score: 192.2 bits (487), Expect = 2.247e-49
Identity = 103/208 (49.52%), Postives = 140/208 (67.31%), Query Frame = 3
Query:   66 NTSELSAEAGTLGETLDADAKWGKTLDERHEQKVMREVEQLRHAKLVRKLEDKLSLAERKMMRAEKALMKVEVSLKPSENRADSESITDEERFMFRKLGLRMKAFLLMGRRGVFDGTIENMHLHWKYRELVKIIAKANNFEQVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYKRPSMLRPKNLLTKRKALARFIELQRHEAL 689
            N  E+   A  + E ++ +AK  K   + H+   M+  ++     ++ K   KLS+A  K   AEK L  +E    P  +  D E IT++E++M RK+GL+MK FLL+GRRGVFDGTIENMHLHWKYRELVKII    + E   K+A  LEAESGG+LV+V+ VSKGY+I+VYRGK+Y+RP  LRP+ LL+KR+AL R +E QR ++L
Sbjct:  498 NEEEIKPRA--VKEDIELEAKDQKDHIQTHQ---MKSRQRNSPEAILEKTSMKLSMALEKKANAEKVLADLENRESPQLSDIDKEGITNDEKYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEYSIEAAHKVAEILEAESGGILVAVEMVSKGYAIIVYRGKNYERPQCLRPQTLLSKREALKRSVEAQRRKSL 700          

HSP 2 Score: 56.9954 bits (136), Expect = 1.128e-8
Identity = 41/152 (26.97%), Postives = 75/152 (49.34%), Query Frame = 3
Query:  177 VEQLRHAKLVRKLEDKLSLAERKMMRAEKALMKVEVSLKPSENRADSESITDEERFMFRKLGLRMKAFLLMGRRGVFDGTIENMHLHWKYRELVKIIAKANNFEQVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYKRPSMLRPKNL 632
            + +    K V K E ++   ERK  + EK     E++L P+E R              R +G+R+   L +G+ G+ +G +  +H  W+  E+VKI  +  +   +K+    LE ++GG+++       G  IL+YRG +Y+ P  +  ++L
Sbjct:  134 ISRYHELKRVWKKETEM---ERK--KEEKVPSLAELTLPPAELRR------------LRTVGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKRTHDVLETKTGGLVI----WRSGSKILLYRGVNYQYPYFVSDRDL 264          
BLAST of FG530650 vs. TAIR peptide
Match: AT5G16180.1 (| Symbols: CRS1, ATCRS1 | ortholog of maize chloroplast splicing factor CRS1 | chr5:5279884-5282898 FORWARD LENGTH=720)

HSP 1 Score: 159.844 bits (403), Expect = 1.236e-39
Identity = 88/198 (44.44%), Postives = 131/198 (66.16%), Query Frame = 3
Query:   87 EAGTLGETLDADAKWGKTLDERHEQKVMREVEQLRHAKLVRKLEDKLSLAERKMMRAEKALMKVEVSLKPSENRADSESITDEERFMFRKLGLRMKAFLLMGRRGVFDGTIENMHLHWKYRELVKIIAKANNFEQVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYKRP-SMLRPKNLLTKRKALARFIELQR 677
            ++GTL E  +   K+G+ +D R+ +    E E+ R  K ++  E KLS+ + K+ ++   L K+    KPSE   D E +T+EER   R++GL+M + L++GRRGVF G +E +H HWK+RE+ K+I     F +V   A ALE ES GVL+S++K+ +G++IL+YRGK+YKRP S L  +NLLTKRKAL R + +QR
Sbjct:  497 KSGTLLEFQELQRKFGE-MDPRNLET---EAEKARLEKELKSQEHKLSILKSKIEKSNMELFKLNSLWKPSEGDDDIEILTNEERECLRRIGLKMNSSLVLGRRGVFFGVMEGLHQHWKHREVAKVITMQKLFSRVVYTAKALETESNGVLISIEKLKEGHAILIYRGKNYKRPSSKLMAQNLLTKRKALQRSVVMQR 690          
BLAST of FG530650 vs. TAIR peptide
Match: AT3G25440.2 (| Symbols: | RNA-binding CRS1 / YhbY (CRM) domain protein | chr3:9224294-9225505 FORWARD LENGTH=380)

HSP 1 Score: 105.531 bits (262), Expect = 2.766e-23
Identity = 56/151 (37.09%), Postives = 96/151 (63.58%), Query Frame = 3
Query:  216 EDKLSLAERKMMRAEKALMKVEVSLKPSENRA---DSESITDEERFMFRKLGLRMKAFLLMGRRGVFDGTIENMHLHWKYRELVKIIAKANNFEQVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYKRP--SMLRPKNLLTKRKAL 653
            E+K+    RK  + E+ LM+    L+PSE+     D E +T EE F + K+GL+ K ++ +GRRG++ G I NMHLHWK  + ++++ K    ++VK+IA+ L   +GG+++    V +G +I++YRGK+Y +P   ++ P+  L ++KAL
Sbjct:   74 EEKILNKLRKARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLD---VHEGNTIIMYRGKNYVQPPTEIMSPRITLPRKKAL 221          
BLAST of FG530650 vs. TAIR peptide
Match: AT3G25440.1 (| Symbols: | RNA-binding CRS1 / YhbY (CRM) domain protein | chr3:9223998-9225505 FORWARD LENGTH=444)

HSP 1 Score: 105.531 bits (262), Expect = 2.766e-23
Identity = 56/151 (37.09%), Postives = 96/151 (63.58%), Query Frame = 3
Query:  216 EDKLSLAERKMMRAEKALMKVEVSLKPSENRA---DSESITDEERFMFRKLGLRMKAFLLMGRRGVFDGTIENMHLHWKYRELVKIIAKANNFEQVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYKRP--SMLRPKNLLTKRKAL 653
            E+K+    RK  + E+ LM+    L+PSE+     D E +T EE F + K+GL+ K ++ +GRRG++ G I NMHLHWK  + ++++ K    ++VK+IA+ L   +GG+++    V +G +I++YRGK+Y +P   ++ P+  L ++KAL
Sbjct:  138 EEKILNKLRKARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLD---VHEGNTIIMYRGKNYVQPPTEIMSPRITLPRKKAL 285          
BLAST of FG530650 vs. TAIR peptide
Match: AT3G27550.1 (| Symbols: | RNA-binding CRS1 / YhbY (CRM) domain protein | chr3:10208010-10209899 REVERSE LENGTH=491)

HSP 1 Score: 104.375 bits (259), Expect = 6.162e-23
Identity = 65/191 (34.03%), Postives = 112/191 (58.64%), Query Frame = 3
Query:  132 GKTLDERHEQKVMREV-EQLRHAKLVRKLEDKLSLAERKMM----RAEKA-------LMKVEVSLKPSENRADSESITDEERFMFRKLGLRMKAFLLMGRRGVFDGTIENMHLHWKYRELVKIIAKANNFEQVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYKRPSMLRPKNLLTKRKAL--ARF 662
            G+++  + E ++ +E  + LR  +  +KL+ KL   E +++    RA+K        L K ++   PS    D E  T E+   F+K+G + K ++ +G RGVF G ++NMH+HWK+ E V++       E++K++A  +   SGGV++++  V    +I+++RG++Y++P  L P N LTKRKAL  ARF
Sbjct:   17 GRSMRSKVESRMRKESGKTLREIRRAKKLKKKLMTDEERLIYNLKRAKKKVALLLQKLKKYDLPELPSPVH-DPELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGGVVQNMHMHWKFHETVQVCCDNFPKEKIKEMASMIARLSGGVVINIHNVK---TIIMFRGRNYRQPKNLIPVNTLTKRKALFKARF 203          
BLAST of FG530650 vs. TAIR peptide
Match: AT4G13070.1 (| Symbols: | RNA-binding CRS1 / YhbY (CRM) domain protein | chr4:7621780-7623051 REVERSE LENGTH=343)

HSP 1 Score: 102.449 bits (254), Expect = 2.342e-22
Identity = 60/152 (39.47%), Postives = 91/152 (59.87%), Query Frame = 3
Query:  210 KLEDKLSLAERKMMRAEKALMKVEVSLKPSENRADSESITDEERFMFRKLGLRMKAFLLMGRRGVFDGTIENMHLHWKYRELVKIIAK-ANNFEQVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYKRPSMLRPKNLLTKRKALARF 662
            ++  KL  A+RK     + L K +V   P+E   D ES+T+EE+   ++ G + K F+L+GRRGVF G + N+HLHWK  E VK+I K  N   QV + A  L   S G+++    V    +I++YRGK+Y RP ++ P + L+K KAL ++
Sbjct:  145 RIRYKLEKAKRKEEWLIEKLRKYDVPKSPAEPY-DPESLTEEEQHYLKRTGEKRKNFVLVGRRGVFGGVVLNLHLHWKKHETVKVICKPCNKPGQVHEYAEELARLSKGIVID---VKPNNTIVLYRGKNYVRPEVMSPVDTLSKDKALEKY 292          
The following BLAST results are available for this feature:
BLAST of FG530650 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9HUM7_POPTR6.144e-9476.42Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9RTE8_RICCO1.513e-9275.11Putative uncharacterized protein OS=Ricinus commun... [more]
D7T793_VITVI2.416e-9074.12Whole genome shotgun sequence of line PN40024, sca... [more]
A5C045_VITVI2.416e-9074.12Putative uncharacterized protein OS=Vitis vinifera... [more]
Q9LS85_ARATH3.489e-8973.59Emb|CAB10230.1 OS=Arabidopsis thaliana GN=At3g2307... [more]
D7L2J2_ARALY1.732e-8873.16Putative uncharacterized protein OS=Arabidopsis ly... [more]
D7MH09_ARALY1.517e-8467.83Putative uncharacterized protein OS=Arabidopsis ly... [more]
O23307_ARATH4.414e-8467.83Putative uncharacterized protein AT4g14510 OS=Arab... [more]
C5Y5D8_SORBI2.267e-8069.00Putative uncharacterized protein Sb05g022980 OS=So... [more]
A7XN92_MAIZE1.469e-7967.69CRM family member 3 OS=Zea mays PE=2 SV=1[more]
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BLAST of FG530650 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 4
Match NameE-valueIdentityDescription
CRS1_MAIZE2.156e-4341.85Chloroplastic group IIA intron splicing facilitato... [more]
CRS1_ORYSJ2.636e-4137.89Chloroplastic group IIA intron splicing facilitato... [more]
CRS1_ARATH1.224e-3844.44Chloroplastic group IIA intron splicing facilitato... [more]
Y3544_ARATH2.741e-2237.09Uncharacterized CRM domain-containing protein At3g... [more]
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BLAST of FG530650 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 10
Match NameE-valueIdentityDescription
AT3G23070.12.373e-9173.59| Symbols: ATCFM3A, CFM3A | CRM family member 3A |... [more]
AT4G14510.13.002e-8667.83| Symbols: ATCFM3B, CFM3B | CRM family member 3B |... [more]
AT3G18390.11.772e-6252.19| Symbols: EMB1865 | CRS1 / YhbY (CRM) domain-cont... [more]
AT4G29750.12.166e-6051.74| Symbols: | CRS1 / YhbY (CRM) domain-containing ... [more]
AT3G01370.12.247e-4949.52| Symbols: ATCFM2, CFM2 | CRM family member 2 | ch... [more]
AT5G16180.11.236e-3944.44| Symbols: CRS1, ATCRS1 | ortholog of maize chloro... [more]
AT3G25440.22.766e-2337.09| Symbols: | RNA-binding CRS1 / YhbY (CRM) domain... [more]
AT3G25440.12.766e-2337.09| Symbols: | RNA-binding CRS1 / YhbY (CRM) domain... [more]
AT3G27550.16.162e-2334.03| Symbols: | RNA-binding CRS1 / YhbY (CRM) domain... [more]
AT4G13070.12.342e-2239.47| Symbols: | RNA-binding CRS1 / YhbY (CRM) domain... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 1..23
score
IPR001890RNA-binding, CRM domainGENE3D3.30.110.60no descriptioncoord: 107..205
score: 2.9
IPR001890RNA-binding, CRM domainPFAMPF01985CRS1_YhbYcoord: 108..195
score: 4.9
IPR001890RNA-binding, CRM domainPROFILEPS51295CRMcoord: 106..206
score: 19
IPR001890RNA-binding, CRM domainSUPERFAMILY75471YhbY-likecoord: 106..207
score: 5

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG530650 ID=FG530650; Name=FG530650; organism=Pisum sativum; type=EST; length=689bp
AAACAATGCAGGATGAGGAGGAGCATGCAAGATTGAGAGCGTCATCATTG
ATCTTACCATCTATTAATACATCAGAGTTGTCAGCAGAGGCTGGGACTCT
TGGTGAAACTTTGGATGCAGATGCAAAATGGGGAAAGACGTTGGATGAGC
GTCACGAGCAAAAAGTTATGAGAGAAGTAGAACAATTACGGCACGCCAAG
CTTGTTAGAAAGTTAGAAGATAAGCTTTCACTTGCTGAAAGAAAGATGAT
GAGAGCTGAAAAAGCCCTAATGAAGGTGGAGGTGTCTTTGAAGCCATCAG
AAAACAGAGCAGACTCAGAAAGCATAACCGATGAAGAGAGATTTATGTTT
CGCAAATTAGGATTGCGGATGAAAGCTTTCTTACTTATGGGTAGACGTGG
AGTATTTGATGGTACTATCGAGAACATGCACTTGCATTGGAAGTATCGGG
AACTGGTCAAGATAATTGCGAAGGCTAACAACTTTGAACAGGTTAAAAAA
ATTGCACTGGCTCTTGAAGCTGAGAGTGGTGGTGTTCTGGTTTCAGTTGA
CAAAGTTTCAAAAGGATATTCTATACTTGTTTATCGAGGAAAGGATTATA
AACGTCCGTCAATGTTGAGACCAAAGAATCTCTTGACAAAGAGAAAAGCT
CTAGCACGTTTCATTGAGCTTCAGCGACATGAGGCACTT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR001890RNA-binding_CRM