FG531253
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FG531253 vs. TrEMBL
Match: D7SUY3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035901001 PE=4 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 5.140e-29 Identity = 64/118 (54.24%), Postives = 85/118 (72.03%), Query Frame = 2 Query: 5 QVEFVKKRVLLLEKGLNAEYQKEYFGDPKAGEVTNEELRSELKSTSVPSYKPVDTNTQMIDQLPQVETIAPEDVS-VACDSDPNRLELVRLYNEMCKVVEENPMDLVQASLAGEPAEV 355 QVEF+KKRVLLLEK LN EYQKEYFGD K+ E+ +E+ +E K + S V+ + Q++DQLP++E IA E++S ACD P R E+ RLYNEMCKV+ EN + VQ+ LA +PA + Sbjct: 1197 QVEFIKKRVLLLEKALNTEYQKEYFGDIKSNEIASEDPENEAKVIDISSPSNVEVDAQIMDQLPRIEVIASEEISATACDDKPERAEMARLYNEMCKVLAENVHESVQSYLANQPASL 1314
BLAST of FG531253 vs. TrEMBL
Match: A5BRA6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043255 PE=4 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 5.140e-29 Identity = 64/118 (54.24%), Postives = 85/118 (72.03%), Query Frame = 2 Query: 5 QVEFVKKRVLLLEKGLNAEYQKEYFGDPKAGEVTNEELRSELKSTSVPSYKPVDTNTQMIDQLPQVETIAPEDVS-VACDSDPNRLELVRLYNEMCKVVEENPMDLVQASLAGEPAEV 355 QVEF+KKRVLLLEK LN EYQKEYFGD K+ E+ +E+ +E K + S V+ + Q++DQLP++E IA E++S ACD P R E+ RLYNEMCKV+ EN + VQ+ LA +PA + Sbjct: 480 QVEFIKKRVLLLEKALNTEYQKEYFGDIKSNEIASEDPENEAKVIDISSPSNVEVDAQIMDQLPRIEVIASEEISATACDDKPERAEMARLYNEMCKVLAENVHESVQSYLANQPASL 597
BLAST of FG531253 vs. TrEMBL
Match: B9RNX6_RICCO (Chromodomain helicase DNA binding protein, putative OS=Ricinus communis GN=RCOM_0921900 PE=4 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.351e-28 Identity = 62/118 (52.54%), Postives = 84/118 (71.19%), Query Frame = 2 Query: 5 QVEFVKKRVLLLEKGLNAEYQKEYFGDPKAGEVTNEELRSELKSTSVPSYKPVDTNTQMIDQLPQVETIAPEDV-SVACDSDPNRLELVRLYNEMCKVVEENPMDLVQASLAGEPAEV 355 QVEF+KKRVLLLEKGLNAEYQKEYF D K+ E+ EE ++K+ + +T+ QMIDQLPQ E I E++ + A D DP+RLEL +LYN+MC ++E+N + VQ S+ +PA + Sbjct: 1196 QVEFIKKRVLLLEKGLNAEYQKEYFDDSKSNEIATEEPEGDIKAADGFNLGSTETDAQMIDQLPQTELITTEEILTAAYDDDPDRLELPQLYNKMCNILEQNVQESVQTSITNQPASL 1313
BLAST of FG531253 vs. TrEMBL
Match: B9HAU9_POPTR (Chromatin remodeling complex subunit (Fragment) OS=Populus trichocarpa GN=CHR911 PE=4 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 6.283e-27 Identity = 64/119 (53.78%), Postives = 82/119 (68.91%), Query Frame = 2 Query: 5 QVEFVKKRVLLLEKGLNAEYQKEYFG-DPKAGEVTNEELRSELKSTSVPSYKPVDTNTQMIDQLPQVETIAPEDVS-VACDSDPNRLELVRLYNEMCKVVEENPMDLVQASLAGEPAEV 355 QVEF+KKRVLLLE+GLNAEYQK YFG D K E+T+EE E K+ S ++ N QMIDQLPQ+E I E++S ACD +P+RL L YN+MC V+E+N + +Q SL PA + Sbjct: 1185 QVEFIKKRVLLLERGLNAEYQKIYFGGDIKPNEITSEEADGETKAADSSSLGSIEINAQMIDQLPQMEPIGSEEISAAACDDNPDRLALAEHYNKMCTVLEQNVHETIQISLTNHPASL 1303
BLAST of FG531253 vs. TrEMBL
Match: B9IL39_POPTR (Chromatin remodeling complex subunit (Fragment) OS=Populus trichocarpa GN=CHR909 PE=4 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.072e-26 Identity = 64/119 (53.78%), Postives = 87/119 (73.11%), Query Frame = 2 Query: 5 QVEFVKKRVLLLEKGLNAEYQKEYF-GDPKAGEVTNEELRSELKSTSVPSYKPVDTNTQMIDQLPQVETIAPEDVS-VACDSDPNRLELVRLYNEMCKVVEENPMDLVQASLAGEPAEV 355 QVEF+KKRVLLLE+GL AEYQKEYF GD KA E+T+EE E + S ++ + QMIDQLP++E+IA E++S ACD +P+RL L +LYN+MC V+E+N + +Q SL +PA + Sbjct: 1182 QVEFIKKRVLLLERGLYAEYQKEYFGGDIKANEITSEEADCETMAADRSSLGSIEISAQMIDQLPRMESIALEEISAAACDDNPDRLALPQLYNKMCTVLEQNIHESIQISLTNQPASL 1300
BLAST of FG531253 vs. TrEMBL
Match: D7LK56_ARALY (PKL/SSL2 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_344116 PE=4 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.715e-16 Identity = 46/114 (40.35%), Postives = 71/114 (62.28%), Query Frame = 2 Query: 8 VEFVKKRVLLLEKGLNAEYQKEYFGDPKAGEVTNEELRSELKSTSVPSYKPVDTNTQMIDQLPQVETIAPEDVSVAC-DSDPNRLELVRLYNEMCKVVEENPMDLVQASLAGEP 346 VEFVKKRVLLLEK LN EY ++Y+G + + EE +E K T ++ + +M+D LP+ + I E++ VA D++ R+E+ + YN+MCKV EN + +QA + +P Sbjct: 1188 VEFVKKRVLLLEKALNYEYAEDYYGLGGSSSIPAEEPEAEPKVTDTVGVSFIEVDDEMLDGLPKTDPITSEEIMVAAVDNNQARVEIAQHYNQMCKVFNENARESLQAYVNNQP 1301
BLAST of FG531253 vs. SwissProt
Match: PKL_ARATH (CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis thaliana GN=PKL PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.428e-17 Identity = 44/114 (38.60%), Postives = 71/114 (62.28%), Query Frame = 2 Query: 8 VEFVKKRVLLLEKGLNAEYQKEYFGDPKAGEVTNEELRSELKSTSVPSYKPVDTNTQMIDQLPQVETIAPEDV-SVACDSDPNRLELVRLYNEMCKVVEENPMDLVQASLAGEP 346 VEFVKKRVLLLEK +N EY +EY+G + + EE +E K ++ + +M+D LP+ + I E++ A D++ R+E+ + YN+MCK+++EN + VQA + +P Sbjct: 1173 VEFVKKRVLLLEKAMNYEYAEEYYGLGGSSSIPTEEPEAEPKIADTVGVSFIEVDDEMLDGLPKTDPITSEEIMGAAVDNNQARVEIAQHYNQMCKLLDENARESVQAYVNNQP 1286
BLAST of FG531253 vs. TAIR peptide
Match: AT2G25170.1 (| Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin remodeling factor CHD3 (PICKLE) | chr2:10714411-10723763 FORWARD LENGTH=1384) HSP 1 Score: 88.1965 bits (217), Expect = 1.179e-18 Identity = 44/114 (38.60%), Postives = 71/114 (62.28%), Query Frame = 2 Query: 8 VEFVKKRVLLLEKGLNAEYQKEYFGDPKAGEVTNEELRSELKSTSVPSYKPVDTNTQMIDQLPQVETIAPEDV-SVACDSDPNRLELVRLYNEMCKVVEENPMDLVQASLAGEP 346 VEFVKKRVLLLEK +N EY +EY+G + + EE +E K ++ + +M+D LP+ + I E++ A D++ R+E+ + YN+MCK+++EN + VQA + +P Sbjct: 1173 VEFVKKRVLLLEKAMNYEYAEEYYGLGGSSSIPTEEPEAEPKIADTVGVSFIEVDDEMLDGLPKTDPITSEEIMGAAVDNNQARVEIAQHYNQMCKLLDENARESVQAYVNNQP 1286 The following BLAST results are available for this feature:
BLAST of FG531253 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 6
BLAST of FG531253 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 1
BLAST of FG531253 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FG531253 ID=FG531253; Name=FG531253; organism=Pisum sativum; type=EST; length=361bpback to top |