FG532959

EST Overview
NameFG532959
Unique NameFG532959
TypeEST
OrganismPisum sativum (pea)
Sequence length567
Libraries
Library NameType
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology
[Close]
BLAST of FG532959 vs. TrEMBL
Match: B9RUG9_RICCO (Cation efflux protein/ zinc transporter, putative OS=Ricinus communis GN=RCOM_0852720 PE=4 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.868e-8
Identity = 25/40 (62.50%), Postives = 35/40 (87.50%), Query Frame = 3 
Query:    6 IGTLHLHLSTDTDKISIKSQVSHLLHNAGIKDLTLQVECV 125
            +GT+HLH+S +TDK S+K + SH+ H+AGIKDLT+QVEC+
Sbjct:  429 VGTMHLHVSAETDKDSMKDRTSHIFHDAGIKDLTVQVECI 468
[Close]
BLAST of FG532959 vs. TrEMBL
Match: D7TWW5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_66.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032551001 PE=4 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 5.434e-8
Identity = 28/40 (70.00%), Postives = 35/40 (87.50%), Query Frame = 3 
Query:    6 IGTLHLHLSTDTDKISIKSQVSHLLHNAGIKDLTLQVECV 125
            +GTLHLH+ST+ DK S K QVS++LH+AGIKDLT+QVE V
Sbjct:  561 VGTLHLHISTEADKASTKVQVSNILHDAGIKDLTVQVEYV 600
The following BLAST results are available for this feature:
BLAST of FG532959 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
B9RUG9_RICCO1.868e-862.50Cation efflux protein/ zinc transporter, putative ... [more]
D7TWW5_VITVI5.434e-870.00Whole genome shotgun sequence of line PN40024, sca... [more]
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Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG532959 ID=FG532959; Name=FG532959; organism=Pisum sativum; type=EST; length=567bp
ATTCAATAGGAACACTGCATCTACATCTGTCAACCGATACTGACAAAATA
TCAATCAAGTCTCAGGTTTCGCATCTATTACACAATGCTGGAATAAAAGA
TTTAACCTTGCAAGTAGAATGTGTTACATAGTATTGTTTTGAGATAGTTC
TTGTTAGCATCTTTGATTACTGAATATGCATACACTATTTGGAACAGAGA
TCAAACATGCTGATAATTTTCATTGGAATGTTAGATAATATTACAACATA
AATTTATGTCTGTTTTCATTTCTGAGGGATGGTTGGTTTTTTATGGGATC
TGTTTCTTGGGATCTAAGAATGTGCAGAGTTGTAACTTGTACAGAAATGT
AACACACAAACATAGATTGTGAAAAAGAATACATTGACAATTTTGTAAGT
GTGTAAGAATGTGTGATGTGTTCAGCAAAATCATGGTGGCGCCGTGGTTA
TGTTGAACCGTAAGAATGTAGATTTTGCAAAATCACGGTTCACCGTGATT
CTTCCTGTCTCAACTTCAATCATACACTATGAATCTTGAGAACTATTGCA
GTCTTATGTGTATTTGC
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