FG534474

EST Overview
NameFG534474
Unique NameFG534474
TypeEST
OrganismPisum sativum (pea)
Sequence length552
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of FG534474 vs. TrEMBL
Match: C6TLW9_SOYBN (Actin-related protein 2/3 complex subunit 5 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 3.572e-62
Identity = 116/134 (86.57%), Postives = 126/134 (94.03%), Query Frame = 1
Query:    1 MAGSEGFVEADNAEAIITRIEHKTLKIESLLKQFKPVEALKTALEGTYAMTSDERCKSAHWIVVHRAIMAIKDVDGMLASLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGHGCILRFLTDTVNT 402
            MAG++GFVEADNAEAIITRIEHK+ KIE+LLKQ+KPVEALKTALEGT+A+  DERCKSAHW+VVHRAIMAIKDVDGML SLDPEYYDILMKYLYRGL+TGDRPTCDQC  IHEKLTE+AG GCILRFLTD VNT
Sbjct:    1 MAGAKGFVEADNAEAIITRIEHKSRKIETLLKQYKPVEALKTALEGTFAIIGDERCKSAHWLVVHRAIMAIKDVDGMLFSLDPEYYDILMKYLYRGLATGDRPTCDQCFLIHEKLTEKAGLGCILRFLTDIVNT 134          
BLAST of FG534474 vs. TrEMBL
Match: A5AQ06_VITVI (Actin-related protein 2/3 complex subunit 5 OS=Vitis vinifera GN=VITISV_036091 PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.405e-58
Identity = 113/134 (84.33%), Postives = 122/134 (91.04%), Query Frame = 1
Query:    1 MAGSEGFVEADNAEAIITRIEHKTLKIESLLKQFKPVEALKTALEGTYAMTSDERCKSAHWIVVHRAIMAIKDVDGMLASLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGHGCILRFLTDTVNT 402
            MAG++ FVEADNAEAIITRIEHK+ KIESLLKQ KP+EALKTALEG+   T DERCKSA+WIVVHRA+MAIKDVD + +SLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAG GCILR L DTVNT
Sbjct:    1 MAGTKEFVEADNAEAIITRIEHKSRKIESLLKQHKPIEALKTALEGSPPNTRDERCKSANWIVVHRAMMAIKDVDSLFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTVNT 134          
BLAST of FG534474 vs. TrEMBL
Match: D7M6B8_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_490565 PE=4 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 5.523e-55
Identity = 108/128 (84.38%), Postives = 116/128 (90.62%), Query Frame = 1
Query:   19 FVEADNAEAIITRIEHKTLKIESLLKQFKPVEALKTALEGTYAMTSDERCKSAHWIVVHRAIMAIKDVDGMLASLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGHGCILRFLTDTVNT 402
            FVEADNAEAII RIE K+ KIESLLKQ+K VEALKTALEG+   T DERCKSA+WIVVHRAIMAIKD+DGML +LD EYYDILMKYLYRGLSTGDRPTCDQCL+IHEKLTERAG GCILR LTDT+NT
Sbjct:    4 FVEADNAEAIIARIETKSRKIESLLKQYKHVEALKTALEGSPPKTRDERCKSANWIVVHRAIMAIKDIDGMLNALDAEYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTERAGLGCILRCLTDTINT 131          
BLAST of FG534474 vs. TrEMBL
Match: Q9M117_ARATH (Actin-related protein 2/3 complex subunit 5 OS=Arabidopsis thaliana GN=AT4g01710 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.230e-54
Identity = 107/128 (83.59%), Postives = 116/128 (90.62%), Query Frame = 1
Query:   19 FVEADNAEAIITRIEHKTLKIESLLKQFKPVEALKTALEGTYAMTSDERCKSAHWIVVHRAIMAIKDVDGMLASLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGHGCILRFLTDTVNT 402
            FVEADNAEAII RIE K+ KIESLLKQ+K VEALKTALEG+   T DERCKSA+WIVVHRA+MAIKD+DGML +LD EYYDILMKYLYRGLSTGDRPTCDQCL+IHEKLTERAG GCILR LTDT+NT
Sbjct:   31 FVEADNAEAIIARIETKSRKIESLLKQYKHVEALKTALEGSPPKTRDERCKSANWIVVHRALMAIKDIDGMLNALDVEYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTERAGLGCILRCLTDTINT 158          
BLAST of FG534474 vs. TrEMBL
Match: Q941F3_ARATH (Actin-related protein 2/3 complex subunit 5 OS=Arabidopsis thaliana GN=At4g01710 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.230e-54
Identity = 107/128 (83.59%), Postives = 116/128 (90.62%), Query Frame = 1
Query:   19 FVEADNAEAIITRIEHKTLKIESLLKQFKPVEALKTALEGTYAMTSDERCKSAHWIVVHRAIMAIKDVDGMLASLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGHGCILRFLTDTVNT 402
            FVEADNAEAII RIE K+ KIESLLKQ+K VEALKTALEG+   T DERCKSA+WIVVHRA+MAIKD+DGML +LD EYYDILMKYLYRGLSTGDRPTCDQCL+IHEKLTERAG GCILR LTDT+NT
Sbjct:    4 FVEADNAEAIIARIETKSRKIESLLKQYKHVEALKTALEGSPPKTRDERCKSANWIVVHRALMAIKDIDGMLNALDVEYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTERAGLGCILRCLTDTINT 131          
BLAST of FG534474 vs. TrEMBL
Match: B9MVA9_POPTR (Actin-related protein 2/3 complex subunit 5 OS=Populus trichocarpa GN=POPTRDRAFT_826736 PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 2.741e-54
Identity = 109/136 (80.15%), Postives = 119/136 (87.50%), Query Frame = 1
Query:    1 MAGSEGFVEADNAEA--IITRIEHKTLKIESLLKQFKPVEALKTALEGTYAMTSDERCKSAHWIVVHRAIMAIKDVDGMLASLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGHGCILRFLTDTVNT 402
            MAG    VEA++AEA  IITRIEHKT KIESLLKQ +PVEALKTALEG+   T DERCKSA+WIVVHRA+MAIKDVD + ++LDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTE+AG GCILR L DTVNT
Sbjct:    1 MAGRGEIVEAESAEAEAIITRIEHKTRKIESLLKQGRPVEALKTALEGSPPKTRDERCKSANWIVVHRALMAIKDVDSLFSALDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGCILRSLADTVNT 136          
BLAST of FG534474 vs. TrEMBL
Match: B9GP52_POPTR (Actin-related protein 2/3 complex subunit 5 OS=Populus trichocarpa GN=POPTRDRAFT_830323 PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.321e-53
Identity = 107/136 (78.68%), Postives = 118/136 (86.76%), Query Frame = 1
Query:    1 MAGSEGFVEADNAEA--IITRIEHKTLKIESLLKQFKPVEALKTALEGTYAMTSDERCKSAHWIVVHRAIMAIKDVDGMLASLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGHGCILRFLTDTVNT 402
            MAG    V+A+NAEA  IITRIEHK+ KIESLLKQ +PVEALKT LEG+   T DERCKSA+WIVVHRA+MAIKDVD + ++LDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTE+AG GCILR L DTVNT
Sbjct:    1 MAGRGETVKAENAEAEAIITRIEHKSRKIESLLKQGRPVEALKTVLEGSPPKTRDERCKSANWIVVHRALMAIKDVDALFSALDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGMGCILRSLADTVNT 136          
BLAST of FG534474 vs. TrEMBL
Match: C5Y4R1_SORBI (Actin-related protein 2/3 complex subunit 5 OS=Sorghum bicolor GN=Sb05g021810 PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 6.752e-53
Identity = 105/135 (77.78%), Postives = 117/135 (86.67%), Query Frame = 1
Query:    1 MAGSEGFVEAD-NAEAIITRIEHKTLKIESLLKQFKPVEALKTALEGTYAMTSDERCKSAHWIVVHRAIMAIKDVDGMLASLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGHGCILRFLTDTVNT 402
            M+ S  + +AD N EAIITR+E K+ KIE+LLKQ KPVEALKTALEG+   T DERCKSA+WIVVHRA+MAI+DVDGM  SLDPEYYDILMKYLYRGLSTGDRPTCDQCL+IHEKLTE+AG GCILR L DTVNT
Sbjct:    1 MSSSAAYPDADENLEAIITRVEQKSRKIETLLKQSKPVEALKTALEGSPLKTRDERCKSANWIVVHRAMMAIRDVDGMFNSLDPEYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTEKAGLGCILRSLADTVNT 135          
BLAST of FG534474 vs. TrEMBL
Match: Q2R2M0_ORYSJ (Actin-related protein 2/3 complex subunit 5 OS=Oryza sativa subsp. japonica GN=Os11g0557900 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 1.965e-52
Identity = 104/134 (77.61%), Postives = 117/134 (87.31%), Query Frame = 1
Query:    4 AGSEGFVEAD-NAEAIITRIEHKTLKIESLLKQFKPVEALKTALEGTYAMTSDERCKSAHWIVVHRAIMAIKDVDGMLASLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGHGCILRFLTDTVNT 402
            + +  +++AD N EAII+RIE K+ KIE+LLKQ KPVEALKTALEGT   T DERCKSA+WIVVHRA+MAI+DVDGM  SLDPEYYDILMKYLYRGLSTGDRPTCDQCL+IHEKLTE+AG GCILR L DTVNT
Sbjct:    3 SSAAAYLDADENLEAIISRIEQKSRKIETLLKQSKPVEALKTALEGTPLKTRDERCKSANWIVVHRAMMAIRDVDGMFNSLDPEYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTEKAGLGCILRSLADTVNT 136          
BLAST of FG534474 vs. TrEMBL
Match: B8BL17_ORYSI (Actin-related protein 2/3 complex subunit 5 OS=Oryza sativa subsp. indica GN=OsI_36484 PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 1.965e-52
Identity = 104/134 (77.61%), Postives = 117/134 (87.31%), Query Frame = 1
Query:    4 AGSEGFVEAD-NAEAIITRIEHKTLKIESLLKQFKPVEALKTALEGTYAMTSDERCKSAHWIVVHRAIMAIKDVDGMLASLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGHGCILRFLTDTVNT 402
            + +  +++AD N EAII+RIE K+ KIE+LLKQ KPVEALKTALEGT   T DERCKSA+WIVVHRA+MAI+DVDGM  SLDPEYYDILMKYLYRGLSTGDRPTCDQCL+IHEKLTE+AG GCILR L DTVNT
Sbjct:    3 SSAAAYLDADENLEAIISRIEQKSRKIETLLKQSKPVEALKTALEGTPLKTRDERCKSANWIVVHRAMMAIRDVDGMFNSLDPEYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTEKAGLGCILRSLADTVNT 136          
BLAST of FG534474 vs. SwissProt
Match: ARPC5_RAT (Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus GN=Arpc5 PE=1 SV=3)

HSP 1 Score: 53.5286 bits (127), Expect = 7.983e-7
Identity = 32/106 (30.19%), Postives = 54/106 (50.94%), Query Frame = 1
Query:   76 KIESLLKQFKPVEALKTALEGTYAMTSDERCKSAHWIVVHRAIMAIK--DVDGMLASLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGHGCILRFLT 387
            +++S L+Q     AL+ AL+     T  +  K     +V + +++ K  D++  + SLD    D+LMKY+Y+G  +    +    L+ HEK     G G I+R LT
Sbjct:   41 EVDSCLRQGNMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISFKANDIEKAVQSLDKNGVDLLMKYIYKGFESPSDNSSAMLLQWHEKALAAGGVGSIVRVLT 146          
BLAST of FG534474 vs. SwissProt
Match: ARPC5_PONAB (Actin-related protein 2/3 complex subunit 5 OS=Pongo abelii GN=ARPC5 PE=2 SV=3)

HSP 1 Score: 53.5286 bits (127), Expect = 7.983e-7
Identity = 32/106 (30.19%), Postives = 54/106 (50.94%), Query Frame = 1
Query:   76 KIESLLKQFKPVEALKTALEGTYAMTSDERCKSAHWIVVHRAIMAIK--DVDGMLASLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGHGCILRFLT 387
            +++S L+Q     AL+ AL+     T  +  K     +V + +++ K  D++  + SLD    D+LMKY+Y+G  +    +    L+ HEK     G G I+R LT
Sbjct:   41 EVDSCLRQGNMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISFKANDIEKAVQSLDKNGVDLLMKYIYKGFESPSDNSSAMLLQWHEKALAAGGVGSIVRVLT 146          
BLAST of FG534474 vs. SwissProt
Match: ARPC5_HUMAN (Actin-related protein 2/3 complex subunit 5 OS=Homo sapiens GN=ARPC5 PE=1 SV=3)

HSP 1 Score: 53.5286 bits (127), Expect = 7.983e-7
Identity = 32/106 (30.19%), Postives = 54/106 (50.94%), Query Frame = 1
Query:   76 KIESLLKQFKPVEALKTALEGTYAMTSDERCKSAHWIVVHRAIMAIK--DVDGMLASLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGHGCILRFLT 387
            +++S L+Q     AL+ AL+     T  +  K     +V + +++ K  D++  + SLD    D+LMKY+Y+G  +    +    L+ HEK     G G I+R LT
Sbjct:   41 EVDSCLRQGNMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISFKANDIEKAVQSLDKNGVDLLMKYIYKGFESPSDNSSAMLLQWHEKALAAGGVGSIVRVLT 146          
BLAST of FG534474 vs. TAIR peptide
Match: AT4G01710.1 (| Symbols: CRK, ARPC5 | ARP2/3 complex 16 kDa subunit (p16-Arc) | chr4:735776-736450 FORWARD LENGTH=132)

HSP 1 Score: 216.083 bits (549), Expect = 1.000e-56
Identity = 107/128 (83.59%), Postives = 116/128 (90.62%), Query Frame = 1
Query:   19 FVEADNAEAIITRIEHKTLKIESLLKQFKPVEALKTALEGTYAMTSDERCKSAHWIVVHRAIMAIKDVDGMLASLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGHGCILRFLTDTVNT 402
            FVEADNAEAII RIE K+ KIESLLKQ+K VEALKTALEG+   T DERCKSA+WIVVHRA+MAIKD+DGML +LD EYYDILMKYLYRGLSTGDRPTCDQCL+IHEKLTERAG GCILR LTDT+NT
Sbjct:    4 FVEADNAEAIIARIETKSRKIESLLKQYKHVEALKTALEGSPPKTRDERCKSANWIVVHRALMAIKDIDGMLNALDVEYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTERAGLGCILRCLTDTINT 131          
BLAST of FG534474 vs. TAIR peptide
Match: AT5G65274.1 (| Symbols: | ARP2/3 complex 16 kDa subunit (p16-Arc) | chr5:26085300-26085960 FORWARD LENGTH=135)

HSP 1 Score: 206.068 bits (523), Expect = 1.035e-53
Identity = 103/134 (76.87%), Postives = 114/134 (85.07%), Query Frame = 1
Query:    1 MAGSEGFVEADNAEAIITRIEHKTLKIESLLKQFKPVEALKTALEGTYAMTSDERCKSAHWIVVHRAIMAIKDVDGMLASLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGHGCILRFLTDTVNT 402
            MAG+  FVEADNAE I+ RIE K+ KIESLLK +K VEALKTAL+G+   T DERCKSA+WIVVHRAIMAIKD++GML SL  EYYDILMKYLYRGLSTGD PTC+QCL IHEKLTERAG GCILR L+DT NT
Sbjct:    1 MAGAAAFVEADNAEEIMARIETKSQKIESLLKHYKHVEALKTALDGSPPKTLDERCKSANWIVVHRAIMAIKDIEGMLNSLTAEYYDILMKYLYRGLSTGDEPTCEQCLMIHEKLTERAGLGCILRCLSDTTNT 134          
The following BLAST results are available for this feature:
BLAST of FG534474 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TLW9_SOYBN3.572e-6286.57Actin-related protein 2/3 complex subunit 5 OS=Gly... [more]
A5AQ06_VITVI1.405e-5884.33Actin-related protein 2/3 complex subunit 5 OS=Vit... [more]
D7M6B8_ARALY5.523e-5584.38Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q9M117_ARATH1.230e-5483.59Actin-related protein 2/3 complex subunit 5 OS=Ara... [more]
Q941F3_ARATH1.230e-5483.59Actin-related protein 2/3 complex subunit 5 OS=Ara... [more]
B9MVA9_POPTR2.741e-5480.15Actin-related protein 2/3 complex subunit 5 OS=Pop... [more]
B9GP52_POPTR2.321e-5378.68Actin-related protein 2/3 complex subunit 5 OS=Pop... [more]
C5Y4R1_SORBI6.752e-5377.78Actin-related protein 2/3 complex subunit 5 OS=Sor... [more]
Q2R2M0_ORYSJ1.965e-5277.61Actin-related protein 2/3 complex subunit 5 OS=Ory... [more]
B8BL17_ORYSI1.965e-5277.61Actin-related protein 2/3 complex subunit 5 OS=Ory... [more]
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BLAST of FG534474 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
ARPC5_RAT7.983e-730.19Actin-related protein 2/3 complex subunit 5 OS=Rat... [more]
ARPC5_PONAB7.983e-730.19Actin-related protein 2/3 complex subunit 5 OS=Pon... [more]
ARPC5_HUMAN7.983e-730.19Actin-related protein 2/3 complex subunit 5 OS=Hom... [more]
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BLAST of FG534474 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G01710.11.000e-5683.59| Symbols: CRK, ARPC5 | ARP2/3 complex 16 kDa subu... [more]
AT5G65274.11.035e-5376.87| Symbols: | ARP2/3 complex 16 kDa subunit (p16-A... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006789ARP2/3 complex 16kDa subunit (p16-Arc)GENE3D1.25.40.190no descriptioncoord: 11..131
score: 1.6
IPR006789ARP2/3 complex 16kDa subunit (p16-Arc)PANTHERPTHR12644ARP2/3 COMPLEX 16 KD SUBUNIT (P16-ARC)coord: 5..135
score: 4.3
IPR006789ARP2/3 complex 16kDa subunit (p16-Arc)PFAMPF04699P16-Arccoord: 11..131
score: 1.5
IPR006789ARP2/3 complex 16kDa subunit (p16-Arc)SUPERFAMILY69103Arp2/3 complex 16 kDa subunit ARPC5coord: 8..134
score: 7.4
NoneNo IPR availableSEGsegsegcoord: 31..45
score
NoneNo IPR availableSEGsegsegcoord: 38..57
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG534474 ID=FG534474; Name=FG534474; organism=Pisum sativum; type=EST; length=552bp
ATGGCAGGCTCTGAAGGATTCGTTGAAGCGGATAATGCAGAAGCCATTAT
CACCAGAATTGAACACAAAACTCTCAAGATCGAAAGTTTACTCAAACAGT
TTAAACCCGTCGAAGCTCTTAAAACTGCTCTTGAAGGAACCTATGCCATG
ACTAGTGATGAGCGTTGCAAGTCGGCACATTGGATTGTTGTGCATAGAGC
AATAATGGCTATAAAAGATGTGGATGGGATGCTTGCTTCCTTGGATCCTG
AATACTATGACATCCTAATGAAGTATTTATATAGAGGCTTATCTACGGGA
GATCGTCCAACATGTGACCAATGTCTTCGAATTCATGAAAAATTGACAGA
GAGAGCAGGCCATGGTTGCATTCTACGTTTCTTGACTGATACTGTAAATA
CAGTTTGATTTTCTTACCCATTTTTTGTTCTCTTCCTTTTGTCGTTGAGT
TACCTTGTATGTGTTGCATGAATACAACAATCAATGTACTGGTTTGGTTT
CACGCCCGGGGTGCAAACCCTAAGAAATGATTTCATATGTCAAAATTTTA
GT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
Vocabulary: Biological Process
TermDefinition
GO:0030833regulation of actin filament polymerization
Vocabulary: INTERPRO
TermDefinition
IPR006789ARPC5