FG534984
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FG534984 vs. TrEMBL
Match: D7T712_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_20.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018011001 PE=4 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.833e-13 Identity = 39/69 (56.52%), Postives = 49/69 (71.01%), Query Frame = 1 Query: 4 HCVDNSSYLGCALPERIEHFDEDVGENSGFGLNEDNTWPSNNVEFGQDSFQS-ELPKPVTNEAEWSDGW 207 HC DN SY GCALPER + D++ + S F E+N PSN VE G++ FQ+ E+PKPV +EAEWSDGW Sbjct: 809 HCSDNDSYQGCALPERQDFVDKEPVQFS-FNHEEENPQPSNEVERGEEPFQAEEIPKPVKDEAEWSDGW 876
BLAST of FG534984 vs. TrEMBL
Match: A5BBR8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014567 PE=4 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.833e-13 Identity = 39/69 (56.52%), Postives = 49/69 (71.01%), Query Frame = 1 Query: 4 HCVDNSSYLGCALPERIEHFDEDVGENSGFGLNEDNTWPSNNVEFGQDSFQS-ELPKPVTNEAEWSDGW 207 HC DN SY GCALPER + D++ + S F E+N PSN VE G++ FQ+ E+PKPV +EAEWSDGW Sbjct: 809 HCSDNDSYQGCALPERQDFVDKEPVQFS-FNHEEENPQPSNEVERGEEPFQAEEIPKPVKDEAEWSDGW 876
BLAST of FG534984 vs. TrEMBL
Match: B9NBN6_POPTR (Putative uncharacterized protein RHEL901 OS=Populus trichocarpa GN=RHEL901 PE=4 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.412e-10 Identity = 39/82 (47.56%), Postives = 50/82 (60.98%), Query Frame = 1 Query: 4 HCVDNSSYLGCALPE-RIEHFD-----EDVGENSGFGLNEDNTW-----PSNNVEFGQD---SFQSELPKPVTNEAEWSDGW 207 HCVDN SY GCALPE R+E D ED + G + + W PS++ E G D S Q+++P+PVT+EAEWSDGW Sbjct: 812 HCVDNDSYQGCALPEKRLECVDNYPTYEDRVDYDGGPVTNEADWCDGWQPSSSGEVGWDHPGSSQAQIPEPVTDEAEWSDGW 893
BLAST of FG534984 vs. TrEMBL
Match: B9RTN2_RICCO (ATP-dependent helicase NAM7, putative OS=Ricinus communis GN=RCOM_0911670 PE=4 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 6.101e-9 Identity = 32/70 (45.71%), Postives = 42/70 (60.00%), Query Frame = 1 Query: 4 HCVDNSSYLGCALPERIEHFDEDVGENSGFGLNEDNTWPSNNVEFG--QDSFQSELPKPVTNEAEWSDGW 207 +C D+ SY GC LPE E+ +E ++ G + N P + E G QD Q+E PKPVT+E EWSDGW Sbjct: 812 YCADHESYQGCGLPEGEEYVEEYQIQDDGANYDYYNGNPQSTEEHGWNQDYCQAETPKPVTDETEWSDGW 881
BLAST of FG534984 vs. SwissProt
Match: SDE3_ARATH (Probable RNA helicase SDE3 OS=Arabidopsis thaliana GN=SDE3 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.752e-11 Identity = 50/144 (34.72%), Postives = 66/144 (45.83%), Query Frame = 1 Query: 7 CVDNSSYLGCALPERIEHFDEDV---GENSGFGLNEDNTWPSNNVEFGQDSFQSELPKPVTNE-AEWSDGWNSNNVESGQAEWSDGWNKLPPNNVESGHGGC------SNGWNTPNNV----ESGQDSFPELPKPVTDEAEWSD 396 CVDN++Y GC LPE+ E +E G ++G + W NN EL NE EWSDGWN+N + EWSDGWN S GG S+GW+ + G + P+ P+ EAEW+D Sbjct: 812 CVDNNAYQGCGLPEQEEFVEEPFKQEGSSNGPQYPPEAEW--NN--------SGELNNGGANENGEWSDGWNNNGGTKEKNEWSDGWN--------SNGGGTKKKDEWSDGWDNNGGTNGINQEGSSNAPQDPQ----EAEWND 933
BLAST of FG534984 vs. TAIR peptide
Match: AT1G05460.1 (| Symbols: SDE3 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:1601357-1604658 REVERSE LENGTH=1002) HSP 1 Score: 69.3218 bits (168), Expect = 1.820e-12 Identity = 50/144 (34.72%), Postives = 66/144 (45.83%), Query Frame = 1 Query: 7 CVDNSSYLGCALPERIEHFDEDV---GENSGFGLNEDNTWPSNNVEFGQDSFQSELPKPVTNE-AEWSDGWNSNNVESGQAEWSDGWNKLPPNNVESGHGGC------SNGWNTPNNV----ESGQDSFPELPKPVTDEAEWSD 396 CVDN++Y GC LPE+ E +E G ++G + W NN EL NE EWSDGWN+N + EWSDGWN S GG S+GW+ + G + P+ P+ EAEW+D Sbjct: 812 CVDNNAYQGCGLPEQEEFVEEPFKQEGSSNGPQYPPEAEW--NN--------SGELNNGGANENGEWSDGWNNNGGTKEKNEWSDGWN--------SNGGGTKKKDEWSDGWDNNGGTNGINQEGSSNAPQDPQ----EAEWND 933 The following BLAST results are available for this feature:
BLAST of FG534984 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 4
BLAST of FG534984 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 1
BLAST of FG534984 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 1
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FG534984 ID=FG534984; Name=FG534984; organism=Pisum sativum; type=EST; length=617bpback to top |