FG535244

EST Overview


Name	FG535244
Unique Name	FG535244
Type	EST
Organism	Pisum sativum (pea)
Sequence length	612

Libraries


Library Name	Type
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTs	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
KEGG analysis for Pisum sativum unigene v1	2011-01-05
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of FG535244 vs. TrEMBL
Match: C6SWT2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.982e-32
Identity = 74/90 (82.22%), Postives = 75/90 (83.33%), Query Frame = 3

Query:  108 SLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLGLYIIRGDNISVVGXXXXXXXXXXXXXXXRAHPLKPVIH 377
            SLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERV+STKEGVQQLVLGLYIIRGDNISVVG               RAHPLKPVIH
Sbjct:    9 SLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRGDNISVVGELDEELDSSLDLSKLRAHPLKPVIH 98

[Close]

BLAST of FG535244 vs. TrEMBL
Match: A9PCH9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_641478 PE=4 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.133e-31
Identity = 72/90 (80.00%), Postives = 74/90 (82.22%), Query Frame = 3

Query:  108 SLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLGLYIIRGDNISVVGXXXXXXXXXXXXXXXRAHPLKPVIH 377
            SLVDQTIS+ITNDGRNIVGVLKGFDQATNIILDESHERV+STKEGVQQLVLGLYIIRGDNI VVG               RAHPLKPVIH
Sbjct:    9 SLVDQTISIITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRGDNIGVVGELDEELDAHLDLSSLRAHPLKPVIH 98

[Close]

BLAST of FG535244 vs. TrEMBL
Match: D7T7C8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_39.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024237001 PE=4 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.480e-31
Identity = 72/90 (80.00%), Postives = 74/90 (82.22%), Query Frame = 3

Query:  108 SLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLGLYIIRGDNISVVGXXXXXXXXXXXXXXXRAHPLKPVIH 377
            SLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERV+STKEGVQQLVLGLYIIRGDNIS+VG               RAHPLKPV H
Sbjct:    9 SLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRGDNISIVGELDEELDSSLDLSKLRAHPLKPVTH 98

[Close]

BLAST of FG535244 vs. TrEMBL
Match: Q5TKF9_ORYSJ (Os05g0594900 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0030I14.7 PE=4 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.137e-30
Identity = 70/90 (77.78%), Postives = 73/90 (81.11%), Query Frame = 3

Query:  108 SLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLGLYIIRGDNISVVGXXXXXXXXXXXXXXXRAHPLKPVIH 377
            SLVDQ ISVITNDGRNIVG L+GFDQATNIILDESHERV+ST+EGVQQLVLGLYIIRGDNISVVG               RAHPLKPVIH
Sbjct:   10 SLVDQIISVITNDGRNIVGTLRGFDQATNIILDESHERVYSTREGVQQLVLGLYIIRGDNISVVGEVDEELDARLDLSNLRAHPLKPVIH 99

[Close]

BLAST of FG535244 vs. TrEMBL
Match: Q8VYI0_ARATH (At1g65700/F1E22_3 OS=Arabidopsis thaliana GN=At1g65700 PE=4 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.760e-30
Identity = 69/90 (76.67%), Postives = 72/90 (80.00%), Query Frame = 3

Query:  108 SLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLGLYIIRGDNISVVGXXXXXXXXXXXXXXXRAHPLKPVIH 377
            +LVDQ ISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQ VLGLYIIRGDNI V+G               RAHPLKPV+H
Sbjct:    9 TLVDQIISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQHVLGLYIIRGDNIGVIGELDEELDASLDFSKLRAHPLKPVVH 98

[Close]

BLAST of FG535244 vs. TrEMBL
Match: B4FNR5_MAIZE (LSM Sm-like protein family member OS=Zea mays PE=4 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.060e-29
Identity = 69/89 (77.53%), Postives = 71/89 (79.78%), Query Frame = 3

Query:  111 LVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLGLYIIRGDNISVVGXXXXXXXXXXXXXXXRAHPLKPVIH 377
            LVDQ ISVITNDGRNIVG L+GFDQATNIILDESHERV+S KEGVQQLVLGLYIIRGDNISVVG               RAHPLKPVIH
Sbjct:   11 LVDQVISVITNDGRNIVGTLRGFDQATNIILDESHERVYSRKEGVQQLVLGLYIIRGDNISVVGEVDEELDSRLDMSKLRAHPLKPVIH 99

[Close]

BLAST of FG535244 vs. TrEMBL
Match: D7KSG5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_315605 PE=4 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.362e-29
Identity = 68/89 (76.40%), Postives = 71/89 (79.78%), Query Frame = 3

Query:  111 LVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLGLYIIRGDNISVVGXXXXXXXXXXXXXXXRAHPLKPVIH 377
            LV+Q ISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQ VLGLYIIRGDNI V+G               RAHPLKPV+H
Sbjct:  502 LVNQIISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQHVLGLYIIRGDNIGVIGELDEELDAGLDLSKLRAHPLKPVVH 590

[Close]

BLAST of FG535244 vs. TrEMBL
Match: B9SCZ8_RICCO (Lsm1, putative OS=Ricinus communis GN=RCOM_1282620 PE=4 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.531e-28
Identity = 67/89 (75.28%), Postives = 71/89 (79.78%), Query Frame = 3

Query:  108 SLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLGLYIIRGDNISVVGXXXXXXXXXXXXXXXRAHPLKPVI 374
            SLVDQ ISVITNDGRNIVG+LKGFDQATNIILDESHERV+STKEGVQ  VLGLYIIRGDNIS+VG               RAHPLKP+I
Sbjct:    9 SLVDQNISVITNDGRNIVGILKGFDQATNIILDESHERVYSTKEGVQLHVLGLYIIRGDNISIVGELDEELDSNLDLASLRAHPLKPLI 97

[Close]

BLAST of FG535244 vs. TrEMBL
Match: Q9SHY4_ARATH (F1E22.8 OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.455e-28
Identity = 66/90 (73.33%), Postives = 70/90 (77.78%), Query Frame = 3

Query:  108 SLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLGLYIIRGDNISVVGXXXXXXXXXXXXXXXRAHPLKPVIH 377
            S + + ISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQ VLGLYIIRGDNI V+G               RAHPLKPV+H
Sbjct:  494 SSIVKIISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQHVLGLYIIRGDNIGVIGELDEELDASLDFSKLRAHPLKPVVH 583

[Close]

BLAST of FG535244 vs. TrEMBL
Match: A9NQ65_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.600e-28
Identity = 63/89 (70.79%), Postives = 72/89 (80.90%), Query Frame = 3

Query:  111 LVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLGLYIIRGDNISVVGXXXXXXXXXXXXXXXRAHPLKPVIH 377
            LVD+TISVITNDGRNIVG+LKG+DQATN+I+DESHERV+ST+ GV+QLVLGLYIIRGDNISVVG               RA PLKPV+H
Sbjct:   10 LVDETISVITNDGRNIVGILKGYDQATNLIMDESHERVYSTRTGVEQLVLGLYIIRGDNISVVGELDEDLDSNLDLSQLRAQPLKPVMH 98

[Close]

BLAST of FG535244 vs. SwissProt
Match: NAA38_PONAB (N-alpha-acetyltransferase 38, NatC auxiliary subunit OS=Pongo abelii GN=NAA38 PE=3 SV=3)

HSP 1 Score: 104.375 bits (259), Expect = 4.809e-22
Identity = 49/88 (55.68%), Postives = 64/88 (72.73%), Query Frame = 3

Query:  114 VDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLGLYIIRGDNISVVGXXXXXXXXXXXXXXXRAHPLKPVIH 377
            +++T++VIT+DGR IVG LKGFDQ  N+ILDESHERVFS+ +GV+Q+VLGLYI+RGDN++V+G               RA PL  V H
Sbjct:    9 INRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVAH 96

[Close]

BLAST of FG535244 vs. SwissProt
Match: NAA38_MOUSE (N-alpha-acetyltransferase 38, NatC auxiliary subunit OS=Mus musculus GN=Naa38 PE=2 SV=3)

HSP 1 Score: 104.375 bits (259), Expect = 4.809e-22
Identity = 49/88 (55.68%), Postives = 64/88 (72.73%), Query Frame = 3

Query:  114 VDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLGLYIIRGDNISVVGXXXXXXXXXXXXXXXRAHPLKPVIH 377
            +++T++VIT+DGR IVG LKGFDQ  N+ILDESHERVFS+ +GV+Q+VLGLYI+RGDN++V+G               RA PL  V H
Sbjct:    9 INRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVAH 96

[Close]

BLAST of FG535244 vs. SwissProt
Match: NAA38_HUMAN (N-alpha-acetyltransferase 38, NatC auxiliary subunit OS=Homo sapiens GN=NAA38 PE=1 SV=3)

HSP 1 Score: 104.375 bits (259), Expect = 4.809e-22
Identity = 49/88 (55.68%), Postives = 64/88 (72.73%), Query Frame = 3

Query:  114 VDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLGLYIIRGDNISVVGXXXXXXXXXXXXXXXRAHPLKPVIH 377
            +++T++VIT+DGR IVG LKGFDQ  N+ILDESHERVFS+ +GV+Q+VLGLYI+RGDN++V+G               RA PL  V H
Sbjct:    9 INRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVAH 96

[Close]

BLAST of FG535244 vs. SwissProt
Match: NAA38_BOVIN (N-alpha-acetyltransferase 38, NatC auxiliary subunit OS=Bos taurus GN=NAA38 PE=3 SV=3)

HSP 1 Score: 104.375 bits (259), Expect = 4.809e-22
Identity = 49/88 (55.68%), Postives = 64/88 (72.73%), Query Frame = 3

Query:  114 VDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLGLYIIRGDNISVVGXXXXXXXXXXXXXXXRAHPLKPVIH 377
            +++T++VIT+DGR IVG LKGFDQ  N+ILDESHERVFS+ +GV+Q+VLGLYI+RGDN++V+G               RA PL  V H
Sbjct:    9 INRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVAH 96

[Close]

BLAST of FG535244 vs. SwissProt
Match: NAA38_DICDI (N-alpha-acetyltransferase 38, NatC auxiliary subunit OS=Dictyostelium discoideum GN=lsm8 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.403e-13
Identity = 33/90 (36.67%), Postives = 59/90 (65.56%), Query Frame = 3

Query:  108 SLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLGLYIIRGDNISVVGXXXXXXXXXXXXXXXRAHPLKPVIH 377
            S + + + V+T DGR+I+G L+G DQ  N++L++ HERV+S  EG++ + LG+++I+GD+++V+G                A P+KP++H
Sbjct:    6 SYLKKQVLVLTADGRSIIGTLRGIDQTINVVLEKCHERVYS-DEGIEVIPLGVHLIKGDDVAVIGEVDDELDKKLNLKEIIAEPMKPIVH 94

[Close]

BLAST of FG535244 vs. SwissProt
Match: LSM8_SCHPO (U6 snRNA-associated Sm-like protein LSm8 OS=Schizosaccharomyces pombe GN=lsm8 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.081e-13
Identity = 33/88 (37.50%), Postives = 54/88 (61.36%), Query Frame = 3

Query:  114 VDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLGLYIIRGDNISVVGXXXXXXXXXXXXXXXRAHPLKPVIH 377
            ++Q + VITNDGR ++G LKGFD  TN+IL +S ER+ S  + ++ + LG+Y++RG+N+++VG               R   +  V+H
Sbjct:    7 MEQRVQVITNDGRVVLGSLKGFDHTTNLILSDSFERIISMDQDMETIPLGVYLLRGENVAMVGLVNEELDSEIEWTKIRGEAIPDVVH 94

[Close]

BLAST of FG535244 vs. SwissProt
Match: LSM1_DICDI (Probable U6 snRNA-associated Sm-like protein LSm1 OS=Dictyostelium discoideum GN=lsm1 PE=3 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 5.708e-7
Identity = 24/63 (38.10%), Postives = 41/63 (65.08%), Query Frame = 3

Query:  114 VDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLGLYIIRGDNISVVG 302
            VD+ + V+  DGR  +G+++ FDQ  NI+L ++ ER++   +      LGL+ IRGDN+ ++G
Sbjct:    9 VDKKLIVVLRDGRKFIGIMRTFDQFANIVLQDTIERIY-VGDCYSDKNLGLFFIRGDNVVILG 70

[Close]

BLAST of FG535244 vs. TAIR peptide
Match: AT1G65700.2 (| Symbols: | Small nuclear ribonucleoprotein family protein | chr1:24434463-24435870 REVERSE LENGTH=98)

HSP 1 Score: 134.806 bits (338), Expect = 3.506e-32
Identity = 69/90 (76.67%), Postives = 72/90 (80.00%), Query Frame = 3

Query:  108 SLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLGLYIIRGDNISVVGXXXXXXXXXXXXXXXRAHPLKPVIH 377
            +LVDQ ISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQ VLGLYIIRGDNI V+G               RAHPLKPV+H
Sbjct:    9 TLVDQIISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQHVLGLYIIRGDNIGVIGELDEELDASLDFSKLRAHPLKPVVH 98

[Close]

BLAST of FG535244 vs. TAIR peptide
Match: AT1G65700.1 (| Symbols: | Small nuclear ribonucleoprotein family protein | chr1:24434463-24435870 REVERSE LENGTH=98)

HSP 1 Score: 134.806 bits (338), Expect = 3.506e-32
Identity = 69/90 (76.67%), Postives = 72/90 (80.00%), Query Frame = 3

Query:  108 SLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLGLYIIRGDNISVVGXXXXXXXXXXXXXXXRAHPLKPVIH 377
            +LVDQ ISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQ VLGLYIIRGDNI V+G               RAHPLKPV+H
Sbjct:    9 TLVDQIISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQHVLGLYIIRGDNIGVIGELDEELDASLDFSKLRAHPLKPVVH 98

[Close]

BLAST of FG535244 vs. TAIR peptide
Match: AT1G65700.3 (| Symbols: | Small nuclear ribonucleoprotein family protein | chr1:24434463-24435870 REVERSE LENGTH=141)

HSP 1 Score: 114.005 bits (284), Expect = 6.404e-26
Identity = 69/133 (51.88%), Postives = 72/133 (54.14%), Query Frame = 3

Query:  108 SLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTK-------------------------------------------EGVQQLVLGLYIIRGDNISVVGXXXXXXXXXXXXXXXRAHPLKPVIH 377
            +LVDQ ISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTK                                           EGVQQ VLGLYIIRGDNI V+G               RAHPLKPV+H
Sbjct:    9 TLVDQIISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKCHLFNRILRKLTQIFKIGLVLQFFVCMSGHVDTSLDKCSWIFLEGVQQHVLGLYIIRGDNIGVIGELDEELDASLDFSKLRAHPLKPVVH 141

[Close]

BLAST of FG535244 vs. TAIR peptide
Match: AT1G19120.1 (| Symbols: | Small nuclear ribonucleoprotein family protein | chr1:6608288-6609162 FORWARD LENGTH=128)

HSP 1 Score: 56.6102 bits (135), Expect = 1.213e-8
Identity = 26/63 (41.27%), Postives = 44/63 (69.84%), Query Frame = 3

Query:  114 VDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLGLYIIRGDNISVVG 302
            +D+ + V+  DGR ++G+L+ FDQ  N +L+E++ERV    +    + LGLYIIRG+N+ ++G
Sbjct:   19 LDKKLLVLLRDGRKLMGLLRSFDQFANAVLEEAYERVI-VGDLYCDIPLGLYIIRGENVVLIG 80

[Close]

BLAST of FG535244 vs. TAIR peptide
Match: AT3G14080.2 (| Symbols: | Small nuclear ribonucleoprotein family protein | chr3:4667717-4668989 FORWARD LENGTH=128)

HSP 1 Score: 54.299 bits (129), Expect = 6.022e-8
Identity = 26/65 (40.00%), Postives = 42/65 (64.62%), Query Frame = 3

Query:  108 SLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLGLYIIRGDNISVVG 302
            S +D+ + V+  DGR ++G L+ FDQ  N +L+ + ERV    E    + LGLY+IRG+N+ ++G
Sbjct:   17 SYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVI-VGEQYCDIPLGLYVIRGENVVLIG 80

[Close]

BLAST of FG535244 vs. TAIR peptide
Match: AT3G14080.1 (| Symbols: | Small nuclear ribonucleoprotein family protein | chr3:4667717-4668989 FORWARD LENGTH=128)

HSP 1 Score: 54.299 bits (129), Expect = 6.022e-8
Identity = 26/65 (40.00%), Postives = 42/65 (64.62%), Query Frame = 3

Query:  108 SLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLGLYIIRGDNISVVG 302
            S +D+ + V+  DGR ++G L+ FDQ  N +L+ + ERV    E    + LGLY+IRG+N+ ++G
Sbjct:   17 SYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVI-VGEQYCDIPLGLYVIRGENVVLIG 80

The following BLAST results are available for this feature:

BLAST of FG535244 vs. TrEMBL
BLAST of FG535244 vs. SwissProt
BLAST of FG535244 vs. TAIR peptide

BLAST of FG535244 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6SWT2_SOYBN	2.982e-32	82.22	Putative uncharacterized protein OS=Glycine max PE...	[more]
A9PCH9_POPTR	1.133e-31	80.00	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7T7C8_VITVI	1.480e-31	80.00	Whole genome shotgun sequence of line PN40024, sca...	[more]
Q5TKF9_ORYSJ	2.137e-30	77.78	Os05g0594900 protein OS=Oryza sativa subsp. japoni...	[more]
Q8VYI0_ARATH	4.760e-30	76.67	At1g65700/F1E22_3 OS=Arabidopsis thaliana GN=At1g6...	[more]
B4FNR5_MAIZE	1.060e-29	77.53	LSM Sm-like protein family member OS=Zea mays PE=4...	[more]
D7KSG5_ARALY	2.362e-29	76.40	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
B9SCZ8_RICCO	1.531e-28	75.28	Lsm1, putative OS=Ricinus communis GN=RCOM_1282620...	[more]
Q9SHY4_ARATH	4.455e-28	73.33	F1E22.8 OS=Arabidopsis thaliana PE=4 SV=1	[more]
A9NQ65_PICSI	7.600e-28	70.79	Putative uncharacterized protein OS=Picea sitchens...	[more]

BLAST of FG535244 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 7


Match Name	E-value	Identity	Description
NAA38_PONAB	4.809e-22	55.68	N-alpha-acetyltransferase 38, NatC auxiliary subun...	[more]
NAA38_MOUSE	4.809e-22	55.68	N-alpha-acetyltransferase 38, NatC auxiliary subun...	[more]
NAA38_HUMAN	4.809e-22	55.68	N-alpha-acetyltransferase 38, NatC auxiliary subun...	[more]
NAA38_BOVIN	4.809e-22	55.68	N-alpha-acetyltransferase 38, NatC auxiliary subun...	[more]
NAA38_DICDI	1.403e-13	36.67	N-alpha-acetyltransferase 38, NatC auxiliary subun...	[more]
LSM8_SCHPO	4.081e-13	37.50	U6 snRNA-associated Sm-like protein LSm8 OS=Schizo...	[more]
LSM1_DICDI	5.708e-7	38.10	Probable U6 snRNA-associated Sm-like protein LSm1 ...	[more]

BLAST of FG535244 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 6


Match Name	E-value	Identity	Description
AT1G65700.2	3.506e-32	76.67	\| Symbols: \| Small nuclear ribonucleoprotein fami...	[more]
AT1G65700.1	3.506e-32	76.67	\| Symbols: \| Small nuclear ribonucleoprotein fami...	[more]
AT1G65700.3	6.404e-26	51.88	\| Symbols: \| Small nuclear ribonucleoprotein fami...	[more]
AT1G19120.1	1.213e-8	41.27	\| Symbols: \| Small nuclear ribonucleoprotein fami...	[more]
AT3G14080.2	6.022e-8	40.00	\| Symbols: \| Small nuclear ribonucleoprotein fami...	[more]
AT3G14080.1	6.022e-8	40.00	\| Symbols: \| Small nuclear ribonucleoprotein fami...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001163	Like-Sm ribonucleoprotein (LSM) domain	PFAM	PF01423	LSM	coord: 2..65 score: 3.5
IPR006649	Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type	SMART	SM00651	no description	coord: 1..66 score: 2
IPR010920	Like-Sm ribonucleoprotein (LSM)-related domain	SUPERFAMILY	50182	Sm-like ribonucleoproteins	coord: 1..75 score: 2.6
None	No IPR available	GENE3D	2.30.30.100	no description	coord: 2..73 score: 1.2
None	No IPR available	PANTHER	PTHR15588	LSM1	coord: 1..90 score: 1.3
None	No IPR available	SEG	seg	seg	coord: 66..80 score

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FG535244 ID=FG535244; Name=FG535244; organism=Pisum sativum; type=EST; length=612bp
ATCCCAATTCACCACTCCATCCCCCCCCGCCATCTCTCAATCTCAATTCA
CCACTCCATCCCCTCCCGCTATTCTACCATCGTTATGTCAACCGGGCCTG
GACTTAGTCTCTCGTAGATCAGACAATTTCAGTTATTACAAATGATGGAC
GAAATATAGTGGGAGTTCTAAAAGGTTTTGATCAGGCAACGAATATAATT
CTCGATGAATCCCATGAACGAGTTTTCTCTACCAAGGAAGGTGTTCAGCA
ACTTGTTCTGGGTTTATACATCATTAGGGGTGACAACATAAGTGTTGTTG
GTGAACTGGATGAAGAACTAGATTCTAACCTTGATTTGTCCAAGCTTAGA
GCTCATCCCTTAAAGCCTGTCATCCATTGAAGTTAAACTATGTTAAATTG
TTAGGAGATGCTTGGTCTCTTCGTGGAAAGGATTGGAGCAGCATTAAACC
GTGAAATGAAATTATATGAATATGCTGATAACATAATATGCTAAATAACT
GACTATCTTGATTCTGTTGTTGTTGGCATGGAAATCATGGGTTTTTTTAC
GTGCTGGATTATGTAATGTAACAAACTCTGAACTATCTGATATGGAAATA
CCTGTTTGTTTT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR001163	Sm_dom_euk/arc
IPR006649	Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type
IPR010920	LSM_dom_sf

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