FG535288

EST Overview
NameFG535288
Unique NameFG535288
TypeEST
OrganismPisum sativum (pea)
Sequence length485
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of FG535288 vs. TrEMBL
Match: B9SAS0_RICCO (Protein translocase, putative OS=Ricinus communis GN=RCOM_1178330 PE=4 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.770e-29
Identity = 61/103 (59.22%), Postives = 74/103 (71.84%), Query Frame = 3
Query:    3 AIWGLCTGPYDARTQGLKGIARAYFVANSVRVFGTQCGLVAGFFSITHCGVKKYRRRNDWVNGLIXXXXXXXXXXXRTRSWPQVIGMAGLVSVFCAAADYSRT 311
            AIWGLC GP++AR +GL G ++A FVA SV  F  QCGLVAG F+ THCG+++YRR+NDWVN LI            TR+W QV+GMAGLVS F  AADYS+T
Sbjct:   27 AIWGLCIGPHNARKRGLTGASQASFVAKSVGKFSFQCGLVAGVFTFTHCGIRRYRRKNDWVNALIAGAVAGAAVAAGTRNWTQVVGMAGLVSAFSVAADYSKT 129          
BLAST of FG535288 vs. TrEMBL
Match: B9I9R2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_572689 PE=4 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.770e-29
Identity = 62/103 (60.19%), Postives = 74/103 (71.84%), Query Frame = 3
Query:    3 AIWGLCTGPYDARTQGLKGIARAYFVANSVRVFGTQCGLVAGFFSITHCGVKKYRRRNDWVNGLIXXXXXXXXXXXRTRSWPQVIGMAGLVSVFCAAADYSRT 311
            AIWG C GPYDAR +GL G+A+A FVA ++  FG QCGLVAG F+ T CG+++YRR+NDWVN LI            TRSW QV+GMAGLVS F  AADYS+T
Sbjct:   27 AIWGSCIGPYDARKRGLTGVAQASFVAKTIGKFGFQCGLVAGVFTATCCGIQRYRRQNDWVNPLIAGAVAGAAVAAGTRSWTQVVGMAGLVSAFSVAADYSKT 129          
BLAST of FG535288 vs. TrEMBL
Match: D7U298_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00028017001 PE=4 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 9.090e-26
Identity = 59/100 (59.00%), Postives = 67/100 (67.00%), Query Frame = 3
Query:    3 AIWGLCTGPYDARTQGLKGIARAYFVANSVRVFGTQCGLVAGFFSITHCGVKKYRRRNDWVNGLIXXXXXXXXXXXRTRSWPQVIGMAGLVSVFCAAADY 302
            AIWGLC  PYDA  +GL G++R  FVA SV     QCGLVAG FS T C V+++RR+NDWVNG I           RTRSW QV+GMAGLVS   AAADY
Sbjct:   27 AIWGLCMSPYDASKKGLTGLSRTAFVAKSVGKISFQCGLVAGVFSGTRCVVQRHRRQNDWVNGFIAGAVAGATVAARTRSWKQVVGMAGLVSACSAAADY 126          
BLAST of FG535288 vs. TrEMBL
Match: Q9LZH8_ARATH (Putative uncharacterized protein At3g62880 OS=Arabidopsis thaliana GN=F26K9_310 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.454e-25
Identity = 54/104 (51.92%), Postives = 72/104 (69.23%), Query Frame = 3
Query:    6 IWGLCTGPYDARTQGLKGIARAYFVANSVRVFGTQCGLVAGFFSITHCGVKKYRRRNDWVNGLIXXXXXXXXXXXRTRSWPQVIGMAGLVSVFCAAADYSRT*N 317
            ++GLC GP DAR  GL G+++A FVA S+  FG QCGLV+G F++THCG+++YR +NDWVN L+            TR+W QV+GMAGLVS F   A+ +RT N
Sbjct:   28 LYGLCAGPRDARKIGLSGVSQASFVAKSIGRFGFQCGLVSGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTRNWTQVVGMAGLVSAFSVLANCTRTEN 131          
BLAST of FG535288 vs. TrEMBL
Match: D7LTA7_ARALY (Atoep16-4 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_486794 PE=4 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.313e-24
Identity = 52/102 (50.98%), Postives = 71/102 (69.61%), Query Frame = 3
Query:    6 IWGLCTGPYDARTQGLKGIARAYFVANSVRVFGTQCGLVAGFFSITHCGVKKYRRRNDWVNGLIXXXXXXXXXXXRTRSWPQVIGMAGLVSVFCAAADYSRT 311
            ++GLC GP DAR  GL G+++A +VA S+  FG QCGLV+G F++THCG+++YR +NDWVN L+            TR+W QV+GMAGLVS F   A+ +RT
Sbjct:   28 LYGLCAGPRDARKIGLSGVSQASYVAKSIGRFGFQCGLVSGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTRNWTQVVGMAGLVSAFSVLANCTRT 129          
BLAST of FG535288 vs. TrEMBL
Match: A9NYH8_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.079e-10
Identity = 36/98 (36.73%), Postives = 51/98 (52.04%), Query Frame = 3
Query:    9 WGLCTGPYDARTQGLKGIARAYFVANSVRVFGTQCGLVAGFFSITHCGVKKYRRRNDWVNGLIXXXXXXXXXXXRTRSWPQVIGMAGLVSVFCAAADY 302
            WG+  GPY+  T+  +G  RA  VA  V   G QCG  AG ++   CG+++YRR+ DWVN  I           RTR+  Q+ G+A   S    + +Y
Sbjct:   35 WGMFIGPYEV-TKVSQGSTRAILVAKLVGKCGLQCGSFAGIYTAFSCGIERYRRKKDWVNASIAGATTGAIIAARTRNVRQICGLAIQFSALTTSLEY 131          
BLAST of FG535288 vs. TrEMBL
Match: A9TZ45_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172788 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 3.470e-9
Identity = 35/100 (35.00%), Postives = 50/100 (50.00%), Query Frame = 3
Query:    9 WGLCTGPYDARTQGLKGIARAYFVANSVRVFGTQCGLVAGFFSITHCGVKKYRRRNDWVNGLIXXXXXXXXXXXRTRSWPQVIGMAGLVSVFCAAADYSR 308
            WG+  G YDA  +G  G +RA +VA S+   G   G  AG +   +CGV+  R + DWVN  I           RT +  +++G + LVS    A D+ R
Sbjct:   38 WGMFMGSYDAVKEGHLGASRALYVAKSITRNGLGWGCFAGAYLGLNCGVESVRNKKDWVNASISGAITGAFVSARTGNVTKMLGTSVLVSAIATAGDFLR 137          
BLAST of FG535288 vs. TAIR peptide
Match: AT3G62880.2 (| Symbols: ATOEP16-4 | Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein | chr3:23245103-23246002 REVERSE LENGTH=136)

HSP 1 Score: 117.857 bits (294), Expect = 2.860e-27
Identity = 54/104 (51.92%), Postives = 72/104 (69.23%), Query Frame = 3
Query:    6 IWGLCTGPYDARTQGLKGIARAYFVANSVRVFGTQCGLVAGFFSITHCGVKKYRRRNDWVNGLIXXXXXXXXXXXRTRSWPQVIGMAGLVSVFCAAADYSRT*N 317
            ++GLC GP DAR  GL G+++A FVA S+  FG QCGLV+G F++THCG+++YR +NDWVN L+            TR+W QV+GMAGLVS F   A+ +RT N
Sbjct:   28 LYGLCAGPRDARKIGLSGVSQASFVAKSIGRFGFQCGLVSGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTRNWTQVVGMAGLVSAFSVLANCTRTEN 131          
BLAST of FG535288 vs. TAIR peptide
Match: AT3G62880.1 (| Symbols: ATOEP16-4 | Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein | chr3:23245103-23246002 REVERSE LENGTH=136)

HSP 1 Score: 117.857 bits (294), Expect = 2.860e-27
Identity = 54/104 (51.92%), Postives = 72/104 (69.23%), Query Frame = 3
Query:    6 IWGLCTGPYDARTQGLKGIARAYFVANSVRVFGTQCGLVAGFFSITHCGVKKYRRRNDWVNGLIXXXXXXXXXXXRTRSWPQVIGMAGLVSVFCAAADYSRT*N 317
            ++GLC GP DAR  GL G+++A FVA S+  FG QCGLV+G F++THCG+++YR +NDWVN L+            TR+W QV+GMAGLVS F   A+ +RT N
Sbjct:   28 LYGLCAGPRDARKIGLSGVSQASFVAKSIGRFGFQCGLVSGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTRNWTQVVGMAGLVSAFSVLANCTRTEN 131          
The following BLAST results are available for this feature:
BLAST of FG535288 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 7
Match NameE-valueIdentityDescription
B9SAS0_RICCO1.770e-2959.22Protein translocase, putative OS=Ricinus communis ... [more]
B9I9R2_POPTR1.770e-2960.19Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7U298_VITVI9.090e-2659.00Whole genome shotgun sequence of line PN40024, sca... [more]
Q9LZH8_ARATH3.454e-2551.92Putative uncharacterized protein At3g62880 OS=Arab... [more]
D7LTA7_ARALY1.313e-2450.98Atoep16-4 OS=Arabidopsis lyrata subsp. lyrata GN=A... [more]
A9NYH8_PICSI1.079e-1036.73Putative uncharacterized protein OS=Picea sitchens... [more]
A9TZ45_PHYPA3.470e-935.00Predicted protein OS=Physcomitrella patens subsp. ... [more]
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BLAST of FG535288 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G62880.22.860e-2751.92| Symbols: ATOEP16-4 | Mitochondrial import inner ... [more]
AT3G62880.12.860e-2751.92| Symbols: ATOEP16-4 | Mitochondrial import inner ... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003397Mitochondrial inner membrane translocase complex, subunit Tim17/22PFAMPF02466Tim17coord: 3..100
score: 1.1
NoneNo IPR availablePANTHERPTHR14110MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22coord: 38..89
score: 0.0
NoneNo IPR availableSEGsegsegcoord: 66..76
score
NoneNo IPR availableSEGsegsegcoord: 24..34
score
NoneNo IPR availableSEGsegsegcoord: 32..48
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG535288 ID=FG535288; Name=FG535288; organism=Pisum sativum; type=EST; length=485bp
GTGCAATTTGGGGTTTGTGTACTGGTCCCTACGACGCTCGTACACAGGGT
CTTAAAGGCATTGCCCGAGCTTATTTTGTGGCAAACTCGGTTCGCGTATT
TGGGACTCAATGCGGACTTGTAGCTGGATTTTTCAGCATTACTCACTGTG
GTGTTAAGAAATACAGGAGGCGCAATGATTGGGTCAATGGTTTGATTGGG
GGAGCTGCAGCAGGTGCAGCTGTTGCTGCTAGGACACGAAGTTGGCCGCA
AGTGATTGGGATGGCCGGTTTGGTTTCTGTTTTCTGTGCTGCAGCTGACT
ATTCTAGAACATAAAATGCCTAGAAGGATATCTGAGGGTCATAAGTATCT
CAGGATACTCAACAAGCATAATTGTTTGCTTTTTGTTGTTTACAACATGT
ATATGTATATATTTATGTGCCTAATAGAGTAATTTCAAACTTTTTTTTCT
GTTTGTAGCCTACACTCAATACATCACAATAATGT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Cellular Component
TermDefinition
GO:0005743mitochondrial inner membrane
Vocabulary: Molecular Function
TermDefinition
GO:0008565obsolete protein transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0015031protein transport
Vocabulary: INTERPRO
TermDefinition
IPR003397Tim17/Tim22/Tim23/PMP24