FG536384

EST Overview
NameFG536384
Unique NameFG536384
TypeEST
OrganismPisum sativum (pea)
Sequence length603
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
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BLAST of FG536384 vs. TrEMBL
Match: B9SYY6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0546900 PE=4 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.717e-13
Identity = 51/177 (28.81%), Postives = 90/177 (50.85%), Query Frame = 1 
Query:  103 STGLQGESCAEQIDSKALTCKDTSESEILPKLSEPA-KCENL----QSSQDSHVEMAVSEDDAEIS---PDRHDSSSFIISNQKESHGGENI--THDIKSDDLYVAQPISVGSSGTNTEGIQNSAISSDSSHAVEWIGDVVQLVDEKKYYQSCCIDGVTYRLHGHAFFTSNHGKLTP 603
            S GL   S   Q+   + +C     S    KL  PA  CE +    ++S+ SH    +++ +   +   P +   ++ ++   +   G  +   T D+K ++  +A   SVGSS  N +   ++ ++S   H+V+WIG+V+++ D K +Y SC + G TY++  HA F S+H KL P
Sbjct:  572 SVGLSSGSSI-QLTQVSGSCIQDERSVSESKLQSPAILCETITNKFENSESSHNLQDINQRELSSTGEIPMKTSQNNCMVDELESIRGHSDCPSTLDMKQNEQDIAHAKSVGSSEANNKARMHAGMNSAGIHSVKWIGNVLKVADGKTFYVSCSVGGATYKVQDHALFRSSHEKLIP 747
[Close]
BLAST of FG536384 vs. TrEMBL
Match: B9GJG6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_753204 PE=4 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.699e-12
Identity = 48/139 (34.53%), Postives = 73/139 (52.52%), Query Frame = 1 
Query:  229 SSQDSHVEMAVSEDDAEISPDRHDSSSFI--ISNQKESHGGENITHDIKS-----------DDLYVAQPISV-GSSGTNTEGIQNSAISSDSSHAVEWIGDVVQLVDEKKYYQSCCIDGVTYRLHGHAFFTSNHGKLTP 603
            S++ S  +  VSE  A+      +SS  I    + K  H  ++I    +S           D   + +  SV GSS  N    ++  +SS   H+VEWIG+ +++ D K +Y+SCCIDGV+Y++  HA F S+ GKLTP
Sbjct:  548 STERSTQQDQVSESPAQEKSSLSESSEKISKCEDSKPLHISQDIIQTEQSNFPKAPLTPHQDHSIMEESASVRGSSVPNNRVGKHPGLSSSGIHSVEWIGNEIKVADGKTFYKSCCIDGVSYKVQDHALFHSSDGKLTP 686
The following BLAST results are available for this feature:
BLAST of FG536384 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
B9SYY6_RICCO6.717e-1328.81Putative uncharacterized protein OS=Ricinus commun... [more]
B9GJG6_POPTR9.699e-1234.53Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 8..19
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG536384 ID=FG536384; Name=FG536384; organism=Pisum sativum; type=EST; length=603bp
TATACAAGAGATATACAAGGATCCATCATTTCATCTAGCATTGAAACCAT
TGAAGAGAAGCCTGATCCAAGCATATTTATGAAATCTGCAGCTTGTAATG
TTTCCACTGGCTTGCAGGGTGAAAGTTGTGCTGAACAGATAGATTCAAAG
GCTTTGACCTGTAAAGATACTTCTGAATCAGAAATTCTTCCTAAATTATC
CGAGCCGGCTAAATGTGAAAATTTGCAATCCTCACAAGATTCTCATGTTG
AGATGGCAGTGTCAGAGGACGATGCTGAAATATCACCAGATAGACATGAT
AGCAGTAGTTTTATCATTAGTAATCAAAAGGAATCTCATGGAGGAGAAAA
TATAACTCACGATATCAAGAGCGATGATCTATATGTTGCACAACCAATTT
CTGTTGGAAGTTCTGGAACTAATACTGAAGGTATTCAGAACTCTGCTATA
TCTTCAGATAGCTCACATGCTGTTGAATGGATTGGTGATGTTGTACAACT
CGTAGATGAGAAAAAGTATTACCAATCTTGCTGCATTGATGGTGTAACAT
ATAGGCTGCATGGTCATGCTTTTTTTACATCCAACCATGGCAAACTGACA
CCT
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