FG536418
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FG536418 vs. TrEMBL
Match: Q9SBS1_MEDVA (Ran GTPase activating protein OS=Medicago varia PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.105e-10 Identity = 32/41 (78.05%), Postives = 36/41 (87.80%), Query Frame = 1 Query: 1 VQKADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDEN 123 VQK FKLLNIN NFISD+G++ELK IF+ SPDMLGPLDEN Sbjct: 464 VQKPGFKLLNINANFISDEGIDELKDIFKNSPDMLGPLDEN 504
BLAST of FG536418 vs. TrEMBL
Match: B7FLD7_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.197e-10 Identity = 30/41 (73.17%), Postives = 36/41 (87.80%), Query Frame = 1 Query: 1 VQKADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDEN 123 VQK FKLLN+N NFISD+G++ELK IF+ SPD+LGPLDEN Sbjct: 464 VQKPGFKLLNVNANFISDEGIDELKDIFKNSPDILGPLDEN 504
BLAST of FG536418 vs. TrEMBL
Match: B9RTY6_RICCO (Leucine rich repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0913930 PE=4 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 2.721e-9 Identity = 34/71 (47.89%), Postives = 42/71 (59.15%), Query Frame = 1 Query: 1 VQKADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDENXXXXXXXXXXXXXXXXXXXXXXXKMKNLVV 213 VQK +FKLLNIN N ISD+G++E+K IF+K P+MLGPLDEN K+KNL V Sbjct: 475 VQKPEFKLLNINENCISDEGIDEVKEIFKKCPEMLGPLDENNPEGPDDDEESGEGDDNQHDLESKLKNLEV 545
BLAST of FG536418 vs. TrEMBL
Match: A5AWW1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039541 PE=4 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 6.061e-9 Identity = 28/39 (71.79%), Postives = 34/39 (87.18%), Query Frame = 1 Query: 7 KADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDEN 123 K FKLLNINGNFISD+G++E+K IF+ PD+LGPLDEN Sbjct: 468 KPGFKLLNINGNFISDEGIDEVKDIFKNCPDVLGPLDEN 506
BLAST of FG536418 vs. TrEMBL
Match: D7LZ68_ARALY (RANGAP2 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_909966 PE=4 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 2.303e-8 Identity = 28/41 (68.29%), Postives = 36/41 (87.80%), Query Frame = 1 Query: 1 VQKADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDEN 123 V+K FKLLNI+GN IS++G+EELK IF+KSP++LG LDEN Sbjct: 463 VKKEAFKLLNIDGNIISEEGIEELKEIFKKSPELLGALDEN 503
BLAST of FG536418 vs. TrEMBL
Match: B9HV83_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1090360 PE=4 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 2.303e-8 Identity = 27/41 (65.85%), Postives = 34/41 (82.93%), Query Frame = 1 Query: 1 VQKADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDEN 123 VQK +FK LNI+GNFISD+G++E+K +FEK PD LG DEN Sbjct: 466 VQKPEFKFLNIDGNFISDEGIDEVKEMFEKFPDRLGSFDEN 506
BLAST of FG536418 vs. TrEMBL
Match: B9S424_RICCO (Leucine rich repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0557810 PE=4 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 3.008e-8 Identity = 28/41 (68.29%), Postives = 34/41 (82.93%), Query Frame = 1 Query: 1 VQKADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDEN 123 V K FKLLNINGNFISD+G++E+K IF+ P +LGPLDEN Sbjct: 466 VLKPGFKLLNINGNFISDEGIDEVKDIFKNLPGVLGPLDEN 506
BLAST of FG536418 vs. TrEMBL
Match: A7M8K2_SOLTU (Ran GTPase-activating protein 2 OS=Solanum tuberosum GN=ranGAP2 PE=2 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 5.131e-8 Identity = 26/41 (63.41%), Postives = 36/41 (87.80%), Query Frame = 1 Query: 1 VQKADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDEN 123 + K +FKLLN+NGNFIS++GV+ELK IF+KSP+ML L++N Sbjct: 464 LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEMLASLEDN 504
BLAST of FG536418 vs. TrEMBL
Match: A5JGX6_NICBE (RAN GTPase-activating protein 2 OS=Nicotiana benthamiana GN=RanGAP2 PE=2 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 6.701e-8 Identity = 25/41 (60.98%), Postives = 36/41 (87.80%), Query Frame = 1 Query: 1 VQKADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDEN 123 + K +FKLLN+NGNFIS++G++ELK IFEKSP++L L++N Sbjct: 464 LHKDEFKLLNVNGNFISEEGIDELKDIFEKSPELLASLEDN 504
BLAST of FG536418 vs. TrEMBL
Match: A5ASC3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012187 PE=4 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 1.950e-7 Identity = 26/41 (63.41%), Postives = 34/41 (82.93%), Query Frame = 1 Query: 1 VQKADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDEN 123 V K KLLNINGNFISD+G++E+K+IF + P++LG LDEN Sbjct: 466 VHKPGLKLLNINGNFISDEGIDEVKSIFNEFPNVLGSLDEN 506
BLAST of FG536418 vs. SwissProt
Match: RAGP2_ARATH (RAN GTPase-activating protein 2 OS=Arabidopsis thaliana GN=RANGAP2 PE=1 SV=2) HSP 1 Score: 62.003 bits (149), Expect = 1.797e-9 Identity = 28/41 (68.29%), Postives = 36/41 (87.80%), Query Frame = 1 Query: 1 VQKADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDEN 123 V+K FKLLNI+GN IS++G+EELK IF+KSP++LG LDEN Sbjct: 465 VKKEAFKLLNIDGNIISEEGIEELKEIFKKSPELLGALDEN 505
BLAST of FG536418 vs. TAIR peptide
Match: AT5G19320.1 (| Symbols: RANGAP2 | RAN GTPase activating protein 2 | chr5:6505310-6506947 REVERSE LENGTH=545) HSP 1 Score: 62.003 bits (149), Expect = 2.018e-10 Identity = 28/41 (68.29%), Postives = 36/41 (87.80%), Query Frame = 1 Query: 1 VQKADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDEN 123 V+K FKLLNI+GN IS++G+EELK IF+KSP++LG LDEN Sbjct: 465 VKKEAFKLLNIDGNIISEEGIEELKEIFKKSPELLGALDEN 505
BLAST of FG536418 vs. TAIR peptide
Match: AT3G06000.1 (| Symbols: | RNI-like superfamily protein | chr3:1801446-1802081 FORWARD LENGTH=211) HSP 1 Score: 54.299 bits (129), Expect = 4.208e-8 Identity = 24/41 (58.54%), Postives = 31/41 (75.61%), Query Frame = 1 Query: 1 VQKADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDEN 123 V+K FK+LNI+GN IS G+EE+K IF P +LGPLD+N Sbjct: 146 VKKGSFKMLNIDGNMISLKGIEEIKVIFTNCPKLLGPLDKN 186
BLAST of FG536418 vs. TAIR peptide
Match: AT3G63130.2 (| Symbols: RANGAP1 | RAN GTPase activating protein 1 | chr3:23325108-23326715 FORWARD LENGTH=535) HSP 1 Score: 51.2174 bits (121), Expect = 3.563e-7 Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 1 Query: 1 VQKADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDEN 123 V+K FKLLNINGNFIS++G++E+ +F+ D L PLD+N Sbjct: 459 VKKNTFKLLNINGNFISEEGIDEVNDMFKDCLDKLVPLDDN 499
BLAST of FG536418 vs. TAIR peptide
Match: AT3G63130.1 (| Symbols: RANGAP1, ATRANGAP1 | RAN GTPase activating protein 1 | chr3:23325108-23326715 FORWARD LENGTH=535) HSP 1 Score: 51.2174 bits (121), Expect = 3.563e-7 Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 1 Query: 1 VQKADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDEN 123 V+K FKLLNINGNFIS++G++E+ +F+ D L PLD+N Sbjct: 459 VKKNTFKLLNINGNFISEEGIDEVNDMFKDCLDKLVPLDDN 499 The following BLAST results are available for this feature:
BLAST of FG536418 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of FG536418 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 1
BLAST of FG536418 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 4
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FG536418 ID=FG536418; Name=FG536418; organism=Pisum sativum; type=EST; length=506bpback to top |