FG536418

EST Overview
NameFG536418
Unique NameFG536418
TypeEST
OrganismPisum sativum (pea)
Sequence length506
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of FG536418 vs. TrEMBL
Match: Q9SBS1_MEDVA (Ran GTPase activating protein OS=Medicago varia PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.105e-10
Identity = 32/41 (78.05%), Postives = 36/41 (87.80%), Query Frame = 1
Query:    1 VQKADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDEN 123
            VQK  FKLLNIN NFISD+G++ELK IF+ SPDMLGPLDEN
Sbjct:  464 VQKPGFKLLNINANFISDEGIDELKDIFKNSPDMLGPLDEN 504          
BLAST of FG536418 vs. TrEMBL
Match: B7FLD7_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.197e-10
Identity = 30/41 (73.17%), Postives = 36/41 (87.80%), Query Frame = 1
Query:    1 VQKADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDEN 123
            VQK  FKLLN+N NFISD+G++ELK IF+ SPD+LGPLDEN
Sbjct:  464 VQKPGFKLLNVNANFISDEGIDELKDIFKNSPDILGPLDEN 504          
BLAST of FG536418 vs. TrEMBL
Match: B9RTY6_RICCO (Leucine rich repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0913930 PE=4 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 2.721e-9
Identity = 34/71 (47.89%), Postives = 42/71 (59.15%), Query Frame = 1
Query:    1 VQKADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDENXXXXXXXXXXXXXXXXXXXXXXXKMKNLVV 213
            VQK +FKLLNIN N ISD+G++E+K IF+K P+MLGPLDEN                       K+KNL V
Sbjct:  475 VQKPEFKLLNINENCISDEGIDEVKEIFKKCPEMLGPLDENNPEGPDDDEESGEGDDNQHDLESKLKNLEV 545          
BLAST of FG536418 vs. TrEMBL
Match: A5AWW1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039541 PE=4 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 6.061e-9
Identity = 28/39 (71.79%), Postives = 34/39 (87.18%), Query Frame = 1
Query:    7 KADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDEN 123
            K  FKLLNINGNFISD+G++E+K IF+  PD+LGPLDEN
Sbjct:  468 KPGFKLLNINGNFISDEGIDEVKDIFKNCPDVLGPLDEN 506          
BLAST of FG536418 vs. TrEMBL
Match: D7LZ68_ARALY (RANGAP2 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_909966 PE=4 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 2.303e-8
Identity = 28/41 (68.29%), Postives = 36/41 (87.80%), Query Frame = 1
Query:    1 VQKADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDEN 123
            V+K  FKLLNI+GN IS++G+EELK IF+KSP++LG LDEN
Sbjct:  463 VKKEAFKLLNIDGNIISEEGIEELKEIFKKSPELLGALDEN 503          
BLAST of FG536418 vs. TrEMBL
Match: B9HV83_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1090360 PE=4 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 2.303e-8
Identity = 27/41 (65.85%), Postives = 34/41 (82.93%), Query Frame = 1
Query:    1 VQKADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDEN 123
            VQK +FK LNI+GNFISD+G++E+K +FEK PD LG  DEN
Sbjct:  466 VQKPEFKFLNIDGNFISDEGIDEVKEMFEKFPDRLGSFDEN 506          
BLAST of FG536418 vs. TrEMBL
Match: B9S424_RICCO (Leucine rich repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0557810 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 3.008e-8
Identity = 28/41 (68.29%), Postives = 34/41 (82.93%), Query Frame = 1
Query:    1 VQKADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDEN 123
            V K  FKLLNINGNFISD+G++E+K IF+  P +LGPLDEN
Sbjct:  466 VLKPGFKLLNINGNFISDEGIDEVKDIFKNLPGVLGPLDEN 506          
BLAST of FG536418 vs. TrEMBL
Match: A7M8K2_SOLTU (Ran GTPase-activating protein 2 OS=Solanum tuberosum GN=ranGAP2 PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 5.131e-8
Identity = 26/41 (63.41%), Postives = 36/41 (87.80%), Query Frame = 1
Query:    1 VQKADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDEN 123
            + K +FKLLN+NGNFIS++GV+ELK IF+KSP+ML  L++N
Sbjct:  464 LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEMLASLEDN 504          
BLAST of FG536418 vs. TrEMBL
Match: A5JGX6_NICBE (RAN GTPase-activating protein 2 OS=Nicotiana benthamiana GN=RanGAP2 PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 6.701e-8
Identity = 25/41 (60.98%), Postives = 36/41 (87.80%), Query Frame = 1
Query:    1 VQKADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDEN 123
            + K +FKLLN+NGNFIS++G++ELK IFEKSP++L  L++N
Sbjct:  464 LHKDEFKLLNVNGNFISEEGIDELKDIFEKSPELLASLEDN 504          
BLAST of FG536418 vs. TrEMBL
Match: A5ASC3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012187 PE=4 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.950e-7
Identity = 26/41 (63.41%), Postives = 34/41 (82.93%), Query Frame = 1
Query:    1 VQKADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDEN 123
            V K   KLLNINGNFISD+G++E+K+IF + P++LG LDEN
Sbjct:  466 VHKPGLKLLNINGNFISDEGIDEVKSIFNEFPNVLGSLDEN 506          
BLAST of FG536418 vs. SwissProt
Match: RAGP2_ARATH (RAN GTPase-activating protein 2 OS=Arabidopsis thaliana GN=RANGAP2 PE=1 SV=2)

HSP 1 Score: 62.003 bits (149), Expect = 1.797e-9
Identity = 28/41 (68.29%), Postives = 36/41 (87.80%), Query Frame = 1
Query:    1 VQKADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDEN 123
            V+K  FKLLNI+GN IS++G+EELK IF+KSP++LG LDEN
Sbjct:  465 VKKEAFKLLNIDGNIISEEGIEELKEIFKKSPELLGALDEN 505          
BLAST of FG536418 vs. TAIR peptide
Match: AT5G19320.1 (| Symbols: RANGAP2 | RAN GTPase activating protein 2 | chr5:6505310-6506947 REVERSE LENGTH=545)

HSP 1 Score: 62.003 bits (149), Expect = 2.018e-10
Identity = 28/41 (68.29%), Postives = 36/41 (87.80%), Query Frame = 1
Query:    1 VQKADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDEN 123
            V+K  FKLLNI+GN IS++G+EELK IF+KSP++LG LDEN
Sbjct:  465 VKKEAFKLLNIDGNIISEEGIEELKEIFKKSPELLGALDEN 505          
BLAST of FG536418 vs. TAIR peptide
Match: AT3G06000.1 (| Symbols: | RNI-like superfamily protein | chr3:1801446-1802081 FORWARD LENGTH=211)

HSP 1 Score: 54.299 bits (129), Expect = 4.208e-8
Identity = 24/41 (58.54%), Postives = 31/41 (75.61%), Query Frame = 1
Query:    1 VQKADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDEN 123
            V+K  FK+LNI+GN IS  G+EE+K IF   P +LGPLD+N
Sbjct:  146 VKKGSFKMLNIDGNMISLKGIEEIKVIFTNCPKLLGPLDKN 186          
BLAST of FG536418 vs. TAIR peptide
Match: AT3G63130.2 (| Symbols: RANGAP1 | RAN GTPase activating protein 1 | chr3:23325108-23326715 FORWARD LENGTH=535)

HSP 1 Score: 51.2174 bits (121), Expect = 3.563e-7
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 1
Query:    1 VQKADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDEN 123
            V+K  FKLLNINGNFIS++G++E+  +F+   D L PLD+N
Sbjct:  459 VKKNTFKLLNINGNFISEEGIDEVNDMFKDCLDKLVPLDDN 499          
BLAST of FG536418 vs. TAIR peptide
Match: AT3G63130.1 (| Symbols: RANGAP1, ATRANGAP1 | RAN GTPase activating protein 1 | chr3:23325108-23326715 FORWARD LENGTH=535)

HSP 1 Score: 51.2174 bits (121), Expect = 3.563e-7
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 1
Query:    1 VQKADFKLLNINGNFISDDGVEELKAIFEKSPDMLGPLDEN 123
            V+K  FKLLNINGNFIS++G++E+  +F+   D L PLD+N
Sbjct:  459 VKKNTFKLLNINGNFISEEGIDEVNDMFKDCLDKLVPLDDN 499          
The following BLAST results are available for this feature:
BLAST of FG536418 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q9SBS1_MEDVA1.105e-1078.05Ran GTPase activating protein OS=Medicago varia PE... [more]
B7FLD7_MEDTR4.197e-1073.17Putative uncharacterized protein OS=Medicago trunc... [more]
B9RTY6_RICCO2.721e-947.89Leucine rich repeat-containing protein, putative O... [more]
A5AWW1_VITVI6.061e-971.79Putative uncharacterized protein OS=Vitis vinifera... [more]
D7LZ68_ARALY2.303e-868.29RANGAP2 OS=Arabidopsis lyrata subsp. lyrata GN=ARA... [more]
B9HV83_POPTR2.303e-865.85Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9S424_RICCO3.008e-868.29Leucine rich repeat-containing protein, putative O... [more]
A7M8K2_SOLTU5.131e-863.41Ran GTPase-activating protein 2 OS=Solanum tuberos... [more]
A5JGX6_NICBE6.701e-860.98RAN GTPase-activating protein 2 OS=Nicotiana benth... [more]
A5ASC3_VITVI1.950e-763.41Putative uncharacterized protein OS=Vitis vinifera... [more]
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BLAST of FG536418 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
RAGP2_ARATH1.797e-968.29RAN GTPase-activating protein 2 OS=Arabidopsis tha... [more]
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BLAST of FG536418 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT5G19320.12.018e-1068.29| Symbols: RANGAP2 | RAN GTPase activating protein... [more]
AT3G06000.14.208e-858.54| Symbols: | RNI-like superfamily protein | chr3:... [more]
AT3G63130.23.563e-756.10| Symbols: RANGAP1 | RAN GTPase activating protein... [more]
AT3G63130.13.563e-756.10| Symbols: RANGAP1, ATRANGAP1 | RAN GTPase activat... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13824NALP (NACHT, LEUCINE RICH REPEAT AND PYRIN DOMAIN CONTAINING)-RELATEDcoord: 1..68
score: 3.6
NoneNo IPR availablePANTHERPTHR13824:SF31LEUCINE RICH REPEAT-CONTAININGcoord: 1..68
score: 3.6
NoneNo IPR availableSEGsegsegcoord: 42..64
score
NoneNo IPR availableSEGsegsegcoord: 32..62
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG536418 ID=FG536418; Name=FG536418; organism=Pisum sativum; type=EST; length=506bp
GTGCAGAAGGCTGATTTTAAACTTCTCAACATTAATGGAAATTTCATTTC
TGATGATGGCGTTGAAGAGTTGAAGGCCATATTCGAAAAATCTCCGGACA
TGCTGGGTCCATTAGATGAAAATGACCCTGATGGAAAAGGCGGTGATGGA
GAATCTGACGAAGAGGGTAGTGTGGAAGATGAACTGGAATCCAAAATGAA
GAACCTTGTGGTTGATTGAATTGTAGCAGTTGGGAGTCTGCTCTCTAGTT
CTGCTGCAAAGTAGCTCTTATGGCAGTAGTATCAGTTTATTAGATTGAGA
GTATGTTTGGACTCTTGTCTTCAATGTTTCTTTTCTTTTTGTTAGATTGA
ATTGAATTATTTGCAGCTTCAATCCTGTAGTCTAGCCATTATTGTAGCAA
TGCCTTTTTTATCATCAGTGCTGCGTTGTTCATTTTTACATGTTAGCTGT
CTAGCTTTTGTTGATTCTGCTATGACATAATCTATATGACATACATACTT
TAGCCT
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