FG536788

EST Overview
NameFG536788
Unique NameFG536788
TypeEST
OrganismPisum sativum (pea)
Sequence length452
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of FG536788 vs. TrEMBL
Match: C6T5T2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 8.425e-32
Identity = 72/96 (75.00%), Postives = 76/96 (79.17%), Query Frame = 1
Query:    1 IMELRNQCRIIRTTELATASXXXXXXXXXXXXXXXXNSPASLLQRIQESVNQTDEESENLHQQLLDKEIDLAAFLQKYKKLRTTYHKKTLIHLAAK 288
            IMELRNQCRIIRTTELA A                 NSPASLLQRIQES N+TDEESENLHQ LLD+EIDLAAFLQKYKKLRTTYH+KTL+HLAAK
Sbjct:  122 IMELRNQCRIIRTTELAAAKEKLNELEKQKEDMLKLNSPASLLQRIQESANKTDEESENLHQHLLDREIDLAAFLQKYKKLRTTYHRKTLVHLAAK 217          
BLAST of FG536788 vs. TrEMBL
Match: C6SWV9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.313e-28
Identity = 68/100 (68.00%), Postives = 73/100 (73.00%), Query Frame = 1
Query:    1 IMELRNQCRIIRTTELATASXXXXXXXXXXXXXXXXNSPASLLQRIQESVNQTDEESENLHQQLLDKEIDLAAFLQKYKKLRTTYHKKTLIHLAAKTSNI 300
            IMELRNQCRIIRTTELA A                 NSPASLLQRIQES N+TDEESENLHQ LLD+EIDLAAFLQKYKKLRTTYH+K L  L    ++I
Sbjct:  122 IMELRNQCRIIRTTELAAAKEKLNELEKQKEDMLKSNSPASLLQRIQESANKTDEESENLHQHLLDREIDLAAFLQKYKKLRTTYHRKLLYILLLNINSI 221          
BLAST of FG536788 vs. TrEMBL
Match: B9S0B5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1352800 PE=4 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 7.381e-28
Identity = 65/99 (65.66%), Postives = 76/99 (76.77%), Query Frame = 1
Query:    1 IMELRNQCRIIRTTELATASXXXXXXXXXXXXXXXXNSPASLLQRIQESVNQTDEESENLHQQLLDKEIDLAAFLQKYKKLRTTYHKKTLIHLAAKTSN 297
            I ELRNQCRIIRTTELATA                  SPASLLQR+QE++N+TDEESE LH+QLLD+EI+L AF+QKYKKLR TYH++TLIHLA KTS+
Sbjct:  129 INELRNQCRIIRTTELATAQEKLNELEKQKEEMLRSCSPASLLQRLQEAINKTDEESEILHKQLLDREIELLAFVQKYKKLRATYHRRTLIHLAGKTSS 227          
BLAST of FG536788 vs. TrEMBL
Match: B9MTK7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_589529 PE=4 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.147e-27
Identity = 65/98 (66.33%), Postives = 73/98 (74.49%), Query Frame = 1
Query:    1 IMELRNQCRIIRTTELATASXXXXXXXXXXXXXXXXNSPASLLQRIQESVNQTDEESENLHQQLLDKEIDLAAFLQKYKKLRTTYHKKTLIHLAAKTS 294
            IMELRNQCRIIRTTELA A                  SPASLLQR+QE++N+TDEESE LH+Q LDKEIDL +F+ KYKKLRTTYHK+ LIHLAAK S
Sbjct:  133 IMELRNQCRIIRTTELAAAKEKLNELERQKEELLRSCSPASLLQRLQEAMNKTDEESEALHRQFLDKEIDLGSFVLKYKKLRTTYHKRALIHLAAKAS 230          
BLAST of FG536788 vs. TrEMBL
Match: D7LUE9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_906697 PE=4 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.101e-26
Identity = 62/100 (62.00%), Postives = 72/100 (72.00%), Query Frame = 1
Query:    1 IMELRNQCRIIRTTELATASXXXXXXXXXXXXXXXXNSPASLLQRIQESVNQTDEESENLHQQLLDKEIDLAAFLQKYKKLRTTYHKKTLIHLAAKTSNI 300
            IMELRNQCRIIRTTELA A                  SP SLL ++QE++NQ DEESE L ++ L+KEID  AF+QKYKKLRTTYH++ LIHLAAKTSNI
Sbjct:  118 IMELRNQCRIIRTTELAAAQEKLNELERQKEEILKFYSPGSLLHKLQEAMNQVDEESEALQEKFLEKEIDTVAFVQKYKKLRTTYHRRALIHLAAKTSNI 217          
BLAST of FG536788 vs. TrEMBL
Match: B9IFT3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_576775 PE=4 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.101e-26
Identity = 61/98 (62.24%), Postives = 73/98 (74.49%), Query Frame = 1
Query:    1 IMELRNQCRIIRTTELATASXXXXXXXXXXXXXXXXNSPASLLQRIQESVNQTDEESENLHQQLLDKEIDLAAFLQKYKKLRTTYHKKTLIHLAAKTS 294
            IMELRNQCRIIRTTELA A                  SPAS+LQR+QE++N+T+EES+  H+Q L+KE+DL AF+QKYKKLRTTYHK+ LIHLAAK S
Sbjct:  130 IMELRNQCRIIRTTELAAAQEKLNELEKQKEELLRSCSPASILQRLQEAMNKTEEESDAFHRQFLEKEMDLGAFVQKYKKLRTTYHKRALIHLAAKAS 227          
BLAST of FG536788 vs. TrEMBL
Match: D7TIW6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00033713001 PE=4 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.289e-26
Identity = 60/99 (60.61%), Postives = 74/99 (74.75%), Query Frame = 1
Query:    1 IMELRNQCRIIRTTELATASXXXXXXXXXXXXXXXXNSPASLLQRIQESVNQTDEESENLHQQLLDKEIDLAAFLQKYKKLRTTYHKKTLIHLAAKTSN 297
            I+ELRNQCRIIRTTELA A                  SPA LL R+QE++N+T+EESE LH+QLLD+E+DL AF+QKYK+LRTTYH++ L HLAAKTS+
Sbjct:  133 IVELRNQCRIIRTTELAAAQEKLNELERQKEEILKFYSPACLLHRLQETMNKTEEESETLHRQLLDREMDLGAFVQKYKRLRTTYHRRALTHLAAKTSS 231          
BLAST of FG536788 vs. TrEMBL
Match: D7LJ62_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_669451 PE=4 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.303e-24
Identity = 58/100 (58.00%), Postives = 74/100 (74.00%), Query Frame = 1
Query:    1 IMELRNQCRIIRTTELATASXXXXXXXXXXXXXXXXNSPASLLQRIQESVNQTDEESENLHQQLLDKEIDLAAFLQKYKKLRTTYHKKTLIHLAAKTSNI 300
            I+ELRNQCRIIRT+ELATA                  SP SLL R+Q+++N+ DEESE L Q+L++K+ID AAF+QKYKKLR+ YH++ LIHLAAKTS+I
Sbjct:  115 IVELRNQCRIIRTSELATAQEKLNELENQREEILKFYSPGSLLHRLQDAMNKVDEESEELQQKLMEKDIDTAAFVQKYKKLRSKYHRRALIHLAAKTSSI 214          
BLAST of FG536788 vs. TrEMBL
Match: Q5YJL6_HYAOR (Autophagy protein AGP6 (Fragment) OS=Hyacinthus orientalis PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.593e-22
Identity = 54/98 (55.10%), Postives = 69/98 (70.41%), Query Frame = 1
Query:    1 IMELRNQCRIIRTTELATASXXXXXXXXXXXXXXXXNSPASLLQRIQESVNQTDEESENLHQQLLDKEIDLAAFLQKYKKLRTTYHKKTLIHLAAKTS 294
            I ELRNQCRIIRTTELA A                  SP S+L+ +Q+++N+T+EESE LH +L++K+IDL  F+QKYKKLR TYH++ L HLAAKTS
Sbjct:   77 IAELRNQCRIIRTTELAAAHEKQRELEKQKDEILRFYSPTSMLRNLQDAMNKTEEESEVLHNKLVEKDIDLVTFVQKYKKLRNTYHRRALTHLAAKTS 174          
BLAST of FG536788 vs. TrEMBL
Match: Q10QR5_ORYSJ (Modifier of rudimentary protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g08770 PE=4 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.634e-22
Identity = 54/98 (55.10%), Postives = 67/98 (68.37%), Query Frame = 1
Query:    1 IMELRNQCRIIRTTELATASXXXXXXXXXXXXXXXXNSPASLLQRIQESVNQTDEESENLHQQLLDKEIDLAAFLQKYKKLRTTYHKKTLIHLAAKTS 294
            I+ELRNQC IIRTTELA A                  SPA+LL ++Q+S+ + DEESE LHQ+ L+K+IDL  F+QKYKKLR  YHK+ L+HLA KTS
Sbjct:  135 ILELRNQCTIIRTTELAAAQDRLAELERQKDEIMRSYSPAALLDKLQKSMAKLDEESEELHQKFLEKDIDLPTFVQKYKKLRAAYHKQALLHLAGKTS 232          
BLAST of FG536788 vs. SwissProt
Match: VP371_ARATH (Vacuolar protein-sorting-associated protein 37 homolog 1 OS=Arabidopsis thaliana GN=VPS37-1 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.704e-28
Identity = 64/100 (64.00%), Postives = 74/100 (74.00%), Query Frame = 1
Query:    1 IMELRNQCRIIRTTELATASXXXXXXXXXXXXXXXXNSPASLLQRIQESVNQTDEESENLHQQLLDKEIDLAAFLQKYKKLRTTYHKKTLIHLAAKTSNI 300
            IMELRNQCRIIRTTELATA                  SP SLL ++QE++NQ DEESE L ++ L+KEID AAF+QKYKKLRTTYH++ LIHLAAKTSNI
Sbjct:  118 IMELRNQCRIIRTTELATAQEKLNELERQKEEILKFYSPGSLLHKLQEAMNQVDEESEALQEKFLEKEIDTAAFVQKYKKLRTTYHRRALIHLAAKTSNI 217          
BLAST of FG536788 vs. SwissProt
Match: VP372_ARATH (Vacuolar protein-sorting-associated protein 37 homolog 2 OS=Arabidopsis thaliana GN=VPS37-2 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 7.916e-26
Identity = 58/100 (58.00%), Postives = 73/100 (73.00%), Query Frame = 1
Query:    1 IMELRNQCRIIRTTELATASXXXXXXXXXXXXXXXXNSPASLLQRIQESVNQTDEESENLHQQLLDKEIDLAAFLQKYKKLRTTYHKKTLIHLAAKTSNI 300
            I+ELRNQCRIIRT+ELATA                  SP SLL R+Q+++NQ DEESE L Q+ ++K+ID AAF+QKYKKLR+ YH++ LIHLAAKTS+I
Sbjct:  118 IVELRNQCRIIRTSELATAQEKLNELENQREEILKFYSPGSLLHRLQDAMNQVDEESEELQQKFMEKDIDTAAFVQKYKKLRSKYHRRALIHLAAKTSSI 217          
BLAST of FG536788 vs. TAIR peptide
Match: AT3G53120.1 (| Symbols: VPS37-1 | Modifier of rudimentary (Mod(r)) protein | chr3:19690729-19692490 REVERSE LENGTH=217)

HSP 1 Score: 124.79 bits (312), Expect = 2.007e-29
Identity = 64/100 (64.00%), Postives = 74/100 (74.00%), Query Frame = 1
Query:    1 IMELRNQCRIIRTTELATASXXXXXXXXXXXXXXXXNSPASLLQRIQESVNQTDEESENLHQQLLDKEIDLAAFLQKYKKLRTTYHKKTLIHLAAKTSNI 300
            IMELRNQCRIIRTTELATA                  SP SLL ++QE++NQ DEESE L ++ L+KEID AAF+QKYKKLRTTYH++ LIHLAAKTSNI
Sbjct:  118 IMELRNQCRIIRTTELATAQEKLNELERQKEEILKFYSPGSLLHKLQEAMNQVDEESEALQEKFLEKEIDTAAFVQKYKKLRTTYHRRALIHLAAKTSNI 217          
BLAST of FG536788 vs. TAIR peptide
Match: AT2G36680.1 (| Symbols: | Modifier of rudimentary (Mod(r)) protein | chr2:15368980-15370726 REVERSE LENGTH=218)

HSP 1 Score: 115.931 bits (289), Expect = 9.323e-27
Identity = 58/100 (58.00%), Postives = 73/100 (73.00%), Query Frame = 1
Query:    1 IMELRNQCRIIRTTELATASXXXXXXXXXXXXXXXXNSPASLLQRIQESVNQTDEESENLHQQLLDKEIDLAAFLQKYKKLRTTYHKKTLIHLAAKTSNI 300
            I+ELRNQCRIIRT+ELATA                  SP SLL R+Q+++NQ DEESE L Q+ ++K+ID AAF+QKYKKLR+ YH++ LIHLAAKTS+I
Sbjct:  118 IVELRNQCRIIRTSELATAQEKLNELENQREEILKFYSPGSLLHRLQDAMNQVDEESEELQQKFMEKDIDTAAFVQKYKKLRSKYHRRALIHLAAKTSSI 217          
The following BLAST results are available for this feature:
BLAST of FG536788 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6T5T2_SOYBN8.425e-3275.00Putative uncharacterized protein OS=Glycine max PE... [more]
C6SWV9_SOYBN3.313e-2868.00Putative uncharacterized protein OS=Glycine max PE... [more]
B9S0B5_RICCO7.381e-2865.66Putative uncharacterized protein OS=Ricinus commun... [more]
B9MTK7_POPTR2.147e-2766.33Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7LUE9_ARALY3.101e-2662.00Putative uncharacterized protein OS=Arabidopsis ly... [more]
B9IFT3_POPTR3.101e-2662.24Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7TIW6_VITVI5.289e-2660.61Whole genome shotgun sequence of line PN40024, sca... [more]
D7LJ62_ARALY1.303e-2458.00Predicted protein OS=Arabidopsis lyrata subsp. lyr... [more]
Q5YJL6_HYAOR1.593e-2255.10Autophagy protein AGP6 (Fragment) OS=Hyacinthus or... [more]
Q10QR5_ORYSJ4.634e-2255.10Modifier of rudimentary protein, expressed OS=Oryz... [more]
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BLAST of FG536788 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
VP371_ARATH1.704e-2864.00Vacuolar protein-sorting-associated protein 37 hom... [more]
VP372_ARATH7.916e-2658.00Vacuolar protein-sorting-associated protein 37 hom... [more]
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BLAST of FG536788 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G53120.12.007e-2964.00| Symbols: VPS37-1 | Modifier of rudimentary (Mod(... [more]
AT2G36680.19.323e-2758.00| Symbols: | Modifier of rudimentary (Mod(r)) pro... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009851Modifier of rudimentary, ModrPFAMPF07200Mod_rcoord: 1..88
score: 5
IPR009851Modifier of rudimentary, ModrPROFILEPS51314VPS37_Ccoord: 20..100
score: 16
NoneNo IPR availableSEGsegsegcoord: 21..36
score
NoneNo IPR availableSUPERFAMILY140111Endosomal sorting complex assembly domaincoord: 31..86
score: 1.1

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG536788 ID=FG536788; Name=FG536788; organism=Pisum sativum; type=EST; length=452bp
ATCATGGAACTTAGGAATCAGTGTAGAATTATTCGAACAACTGAGTTAGC
TACTGCCAGTGAGAAACTAAATGAGCTCGAGAAGCAGAAAGAAGAAATGC
TAAAGTTGAATTCCCCTGCATCCCTTCTCCAAAGGATTCAAGAGTCTGTG
AACCAGACAGATGAGGAGTCTGAAAACCTGCACCAGCAACTCCTTGACAA
AGAGATTGACCTTGCAGCTTTTTTGCAGAAATACAAGAAGCTACGCACCA
CCTACCACAAGAAAACTCTTATACATCTTGCTGCTAAAACATCAAATATA
TGAGCCTTGACATATGAAATATGAAAATAATGAATTAAACCAATTATATA
AGTTGTACTTGTGTGGATAGAGCTTTGATGAATGAGAAACGTTTATATGT
ACAGCTTGAAAATGGAGATTGTTCTCTGTAGTGACTTGTATTCATAAGTC
TG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR009851Mod_r