FG537017

EST Overview
NameFG537017
Unique NameFG537017
TypeEST
OrganismPisum sativum (pea)
Sequence length459
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of FG537017 vs. TrEMBL
Match: B7FGB0_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 6.363e-18
Identity = 48/72 (66.67%), Postives = 51/72 (70.83%), Query Frame = -2
Query:    3 PERSFRAFDNGITFHNG*CCCRKLTQAPKSSHSPFTGNFLPSGLCPFHAKAVVERRNRTRHGRILLAESAID 218
            P   FRAF + IT  NG C CRKLTQ+PKSSHSP  GN  P    PFH KAVVE RNRTRHG  LLA+SAID
Sbjct:    5 PRSQFRAFVDSITCDNGKCFCRKLTQSPKSSHSPLKGNLAPC-FDPFHTKAVVEGRNRTRHGGTLLAKSAID 75          

HSP 2 Score: 21.557 bits (44), Expect = 6.363e-18
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = -1
Query:  205 MVPVPRTQF 231
            MVPVPR+QF
Sbjct:    1 MVPVPRSQF 9          
BLAST of FG537017 vs. TrEMBL
Match: B9N5K8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_672144 PE=4 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 5.819e-9
Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 3
Query:    3 INGTLREEDSPMSGSVSPFNNSLGMKRAKTRG 98
            +NGTLREE SPMSGSVSPFNNSLGMKRAKTRG
Sbjct:  270 LNGTLREEGSPMSGSVSPFNNSLGMKRAKTRG 301          
BLAST of FG537017 vs. TrEMBL
Match: A9PGC0_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 5.819e-9
Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 3
Query:    3 INGTLREEDSPMSGSVSPFNNSLGMKRAKTRG 98
            +NGTLREE SPMSGSVSPFNNSLGMKRAKTRG
Sbjct:  145 LNGTLREEGSPMSGSVSPFNNSLGMKRAKTRG 176          
BLAST of FG537017 vs. TrEMBL
Match: B9GHJ4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_642696 PE=4 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.693e-8
Identity = 29/32 (90.62%), Postives = 30/32 (93.75%), Query Frame = 3
Query:    3 INGTLREEDSPMSGSVSPFNNSLGMKRAKTRG 98
            +NGT REE SPMSGSVSPFNNSLGMKRAKTRG
Sbjct:  271 LNGTFREEGSPMSGSVSPFNNSLGMKRAKTRG 302          
BLAST of FG537017 vs. TrEMBL
Match: B9T3W9_RICCO (Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_0169850 PE=4 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 2.211e-8
Identity = 29/32 (90.62%), Postives = 31/32 (96.88%), Query Frame = 3
Query:    3 INGTLREEDSPMSGSVSPFNNSLGMKRAKTRG 98
            +NGTLREE SPMSGSVSPF+NSLGMKRAKTRG
Sbjct:  269 LNGTLREEGSPMSGSVSPFHNSLGMKRAKTRG 300          
BLAST of FG537017 vs. TrEMBL
Match: D7UAP0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_15.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00014762001 PE=4 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.445e-7
Identity = 28/32 (87.50%), Postives = 30/32 (93.75%), Query Frame = 3
Query:    3 INGTLREEDSPMSGSVSPFNNSLGMKRAKTRG 98
            +NGTLREE S MSGSVSPF+NSLGMKRAKTRG
Sbjct:  256 LNGTLREEGSHMSGSVSPFHNSLGMKRAKTRG 287          
BLAST of FG537017 vs. SwissProt
Match: QKIL1_ARATH (KH domain-containing protein At4g26475 OS=Arabidopsis thaliana GN=At4g26475 PE=2 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 3.763e-7
Identity = 26/32 (81.25%), Postives = 30/32 (93.75%), Query Frame = 3
Query:    3 INGTLREEDSPMSGSVSPFNNSLGMKRAKTRG 98
            +NG+LREE SPMSGS+SP+ NSLGMKRAKTRG
Sbjct:  278 LNGSLREEGSPMSGSISPY-NSLGMKRAKTRG 308          
BLAST of FG537017 vs. SwissProt
Match: QKIL2_ARATH (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 4.914e-7
Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 3
Query:    3 INGTLREEDSPMSGSVSPFNNSLGMKRAKTR 95
            +NGTLREE SPMSGSVSP+ NSLGMKRAKTR
Sbjct:  284 LNGTLREEGSPMSGSVSPY-NSLGMKRAKTR 313          
BLAST of FG537017 vs. TAIR peptide
Match: AT4G26480.1 (| Symbols: | RNA-binding KH domain-containing protein | chr4:13372885-13375793 REVERSE LENGTH=308)

HSP 1 Score: 53.9138 bits (128), Expect = 4.498e-8
Identity = 26/32 (81.25%), Postives = 30/32 (93.75%), Query Frame = 3
Query:    3 INGTLREEDSPMSGSVSPFNNSLGMKRAKTRG 98
            +NG+LREE SPMSGS+SP+ NSLGMKRAKTRG
Sbjct:  278 LNGSLREEGSPMSGSISPY-NSLGMKRAKTRG 308          
BLAST of FG537017 vs. TAIR peptide
Match: AT5G56140.1 (| Symbols: | RNA-binding KH domain-containing protein | chr5:22725462-22727932 FORWARD LENGTH=315)

HSP 1 Score: 53.5286 bits (127), Expect = 5.875e-8
Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 3
Query:    3 INGTLREEDSPMSGSVSPFNNSLGMKRAKTR 95
            +NGTLREE SPMSGSVSP+ NSLGMKRAKTR
Sbjct:  284 LNGTLREEGSPMSGSVSPY-NSLGMKRAKTR 313          
The following BLAST results are available for this feature:
BLAST of FG537017 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 6
Match NameE-valueIdentityDescription
B7FGB0_MEDTR6.363e-1866.67Putative uncharacterized protein OS=Medicago trunc... [more]
B9N5K8_POPTR5.819e-993.75Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9PGC0_POPTR5.819e-993.75Putative uncharacterized protein OS=Populus tricho... [more]
B9GHJ4_POPTR1.693e-890.63Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9T3W9_RICCO2.211e-890.63Nucleic acid binding protein, putative OS=Ricinus ... [more]
D7UAP0_VITVI2.445e-787.50Whole genome shotgun sequence of line PN40024, sca... [more]
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BLAST of FG537017 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
QKIL1_ARATH3.763e-781.25KH domain-containing protein At4g26475 OS=Arabidop... [more]
QKIL2_ARATH4.914e-787.10KH domain-containing protein At5g56140 OS=Arabidop... [more]
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BLAST of FG537017 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G26480.14.498e-881.25| Symbols: | RNA-binding KH domain-containing pro... [more]
AT5G56140.15.875e-887.10| Symbols: | RNA-binding KH domain-containing pro... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 23..42
score
NoneNo IPR availableSEGsegsegcoord: 21..34
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG537017 ID=FG537017; Name=FG537017; organism=Pisum sativum; type=EST; length=459bp
TGATCAATGGCACTCTCCGCGAGGAGGATTCTCCCATGTCTGGTTCTGTT
TCGCCGTTCAACAACAGCCTTGGCATGAAAAGGGCAAAGACCAGAGGGTA
AAAAATTCCCGGTAAAGGGTGAGTGAGAGGATTTTGGAGCTTGTGTTAAT
TTTCTACAACAGCATTAACCATTGTGAAAGGTGATGCCGTTATCAAATGC
CCTAAAACTGCGTTCGGGGCACTGGCACCATAGGGTCAGTTTTATGTGCA
GTGTGTTTACATTCAGGTTTAAAAATGGTAGCACATAGTACAGTATAATG
GTCTGCTAGAGTTTGGTGAATTTGCTTCTTTTTTTAGGCTGTTTGGTTTC
ATATTTATTAATTATGTTTATATTATTATCATTATTACTGTTATATATAT
ATTCACAGCTTGCGTTGACAGTTTTGATATGNTTTTGCAATATAATGCAT
GATTTGTAA
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