FG537493

EST Overview
NameFG537493
Unique NameFG537493
TypeEST
OrganismPisum sativum (pea)
Sequence length312
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology
BLAST of FG537493 vs. TrEMBL
Match: B9HBC0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_560703 PE=4 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.128e-18
Identity = 46/86 (53.49%), Postives = 61/86 (70.93%), Query Frame = 3
Query:   51 SVFSSAARTNSRNVCPESNANYWKCVNRLVCEGDLNSAYMEALCSGDKLILVELLNKTGPVIESLSVKTVNVLLNTLAPYLLQGKF 308
            SVF+  +  NSR   PES    W+CV   +CEGDL SAY EALCS D+L+L+EL+++TGPV+ESLS KT   +L+ LA Y L+ +F
Sbjct:  677 SVFAPLSSANSRQSGPESKNCVWQCVKDFLCEGDLESAYEEALCSIDELVLIELIDRTGPVLESLSSKTAGDVLSILASYFLEQRF 762          
BLAST of FG537493 vs. TrEMBL
Match: D7T0N8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_65.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032268001 PE=4 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.086e-18
Identity = 49/99 (49.49%), Postives = 67/99 (67.68%), Query Frame = 3
Query:   12 QSMSSAQVSKNGSSVFSSAARTNSRNVCPESNANYWKCVNRLVCEGDLNSAYMEALCSGDKLILVELLNKTGPVIESLSVKTVNVLLNTLAPYLLQGKF 308
            Q+M+  Q  K   +VF  A+  N++    E   + W CV   +CEGD+ SAY+EALCSGD+L+LVELL++TGPV+E LS KTVN +L  LA Y L+ +F
Sbjct:  664 QNMACIQTRKT-DAVFLPASIGNTKQNGSECKNSLWHCVKGFLCEGDIESAYVEALCSGDELVLVELLDRTGPVLECLSHKTVNDILCILASYFLEQRF 761          
BLAST of FG537493 vs. TrEMBL
Match: B9SP95_RICCO (Microtubule-associated protein TORTIFOLIA1, putative OS=Ricinus communis GN=RCOM_0588940 PE=4 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.900e-17
Identity = 48/88 (54.55%), Postives = 67/88 (76.14%), Query Frame = 3
Query:   48 SSVFSSAARTNSRNVCPESNANY-WKCVNRLVCEGDLNSAYMEALCSGDKLILVELLNKTGPVIESLSVKTVNVLLNTLAPYLLQGKF 308
            +SV S+ AR N      + N++Y W+ V   +CEGDL+SAY+EALCS D+L+L+ELL++TGPV+ESLS KTV+ +LNTLA Y L+ +F
Sbjct:  684 ASVSSANARENG-----QVNSSYLWQRVKGFLCEGDLDSAYVEALCSTDELLLIELLDRTGPVLESLSHKTVSDILNTLASYFLEQRF 766          
BLAST of FG537493 vs. TrEMBL
Match: B9N826_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_786182 PE=4 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.273e-11
Identity = 34/65 (52.31%), Postives = 47/65 (72.31%), Query Frame = 3
Query:   51 SVFSSAARTNSRNVCPESNANYWKCVNRLVCEGDLNSAYMEALCSGDKLILVELLNKTGPVIESL 245
            SVF+S +  N+R    ES    WKCV   +CEGD+ SAY EA+ SGD+L+L+EL+++TG V+ESL
Sbjct:  101 SVFASLSSANARQSGSESKNCTWKCVKGFLCEGDMESAYEEAIFSGDELVLIELIDRTGHVLESL 165          
BLAST of FG537493 vs. TrEMBL
Match: Q9ZV77_ARATH (Putative uncharacterized protein At2g07170 OS=Arabidopsis thaliana GN=At2g07170 PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 3.467e-9
Identity = 31/63 (49.21%), Postives = 46/63 (73.02%), Query Frame = 3
Query:  120 KCVNRLVCEGDLNSAYMEALCSGDKLILVELLNKTGPVIESLSVKTVNVLLNTLAPYLLQGKF 308
            K V  + CE  + S Y++ L SGD+L LVELL++TGPV+ES+S +T+N +L+ L  YLL+ +F
Sbjct:  689 KPVTGVSCEDVVESEYLQVLSSGDELALVELLDRTGPVLESMSSQTINEILSILLSYLLERRF 751          
BLAST of FG537493 vs. TrEMBL
Match: D7LA95_ARALY (Binding protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_319369 PE=4 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 4.528e-9
Identity = 31/63 (49.21%), Postives = 46/63 (73.02%), Query Frame = 3
Query:  120 KCVNRLVCEGDLNSAYMEALCSGDKLILVELLNKTGPVIESLSVKTVNVLLNTLAPYLLQGKF 308
            K V  + CE  + S Y++ L SGD+L LVELL++TGPV+ES+S +T+N +L+ L  YLL+ +F
Sbjct:  650 KPVTGVSCEEVVESEYLDVLSSGDELALVELLDRTGPVLESMSSQTINEILSILLSYLLERRF 712          
BLAST of FG537493 vs. TrEMBL
Match: D5AAK8_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.721e-8
Identity = 39/119 (32.77%), Postives = 66/119 (55.46%), Query Frame = 3
Query:    3 EDRQSMSSAQVS-KNGSSVFSSAARTNSR-NVCPESNAN------------YWKCVNRLVC---EGDLNSAYMEALCSGDKLILVELLNKTGPVIESLSVKTVNVLLNTLAPYLLQGKF 308
            +D  ++S+ +V+ K+G +    + + NSR N    S  N            +W    R V     GD++SA++E LC GD L+L+ L+N+TGPV+E LS  T+  +L T+  +L++ K+
Sbjct:   66 KDEATLSAIRVAGKDGKTEELESVKENSRPNTLDPSTENLSSSKSRHGSTVFWSVWTRAVDFLRTGDVDSAFVEVLCPGDDLLLIRLMNRTGPVLEHLSQGTIVEMLQTIMQFLMKQKY 184          
BLAST of FG537493 vs. TAIR peptide
Match: AT2G07170.1 (| Symbols: | ARM repeat superfamily protein | chr2:2975565-2978692 FORWARD LENGTH=820)

HSP 1 Score: 64.6994 bits (156), Expect = 1.324e-11
Identity = 31/63 (49.21%), Postives = 46/63 (73.02%), Query Frame = 3
Query:  120 KCVNRLVCEGDLNSAYMEALCSGDKLILVELLNKTGPVIESLSVKTVNVLLNTLAPYLLQGKF 308
            K V  + CE  + S Y++ L SGD+L LVELL++TGPV+ES+S +T+N +L+ L  YLL+ +F
Sbjct:  689 KPVTGVSCEDVVESEYLQVLSSGDELALVELLDRTGPVLESMSSQTINEILSILLSYLLERRF 751          
BLAST of FG537493 vs. TAIR peptide
Match: AT4G27060.1 (| Symbols: TOR1, SPR2, CN | ARM repeat superfamily protein | chr4:13581581-13585070 REVERSE LENGTH=864)

HSP 1 Score: 51.6026 bits (122), Expect = 1.160e-7
Identity = 20/55 (36.36%), Postives = 39/55 (70.91%), Query Frame = 3
Query:  147 GDLNSAYMEALCSGDKLILVELLNKTGPVIESLSVKTVNVLLNTLAPYLLQGKFF 311
            GD+++AY E LC+GD+ ++++L++KTGP ++ +S +  N  LN ++ +LL    +
Sbjct:  736 GDIDAAYAEVLCAGDQHLVIKLMDKTGPSLDQMSNEIANEALNFISQFLLDHSLY 790          
The following BLAST results are available for this feature:
BLAST of FG537493 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 7
Match NameE-valueIdentityDescription
B9HBC0_POPTR3.128e-1853.49Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7T0N8_VITVI4.086e-1849.49Whole genome shotgun sequence of line PN40024, sca... [more]
B9SP95_RICCO5.900e-1754.55Microtubule-associated protein TORTIFOLIA1, putati... [more]
B9N826_POPTR1.273e-1152.31Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q9ZV77_ARATH3.467e-949.21Putative uncharacterized protein At2g07170 OS=Arab... [more]
D7LA95_ARALY4.528e-949.21Binding protein OS=Arabidopsis lyrata subsp. lyrat... [more]
D5AAK8_PICSI1.721e-832.77Putative uncharacterized protein OS=Picea sitchens... [more]
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BLAST of FG537493 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT2G07170.11.324e-1149.21| Symbols: | ARM repeat superfamily protein | chr... [more]
AT4G27060.11.160e-736.36| Symbols: TOR1, SPR2, CN | ARM repeat superfamily... [more]
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Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG537493 ID=FG537493; Name=FG537493; organism=Pisum sativum; type=EST; length=312bp
GGGAGGATAGACAGAGCATGAGTTCTGCTCAAGTTAGTAAGAATGGCAGC
AGTGTCTTTTCTTCTGCTGCCAGAACCAATTCTAGAAATGTTTGTCCCGA
GAGTAACGCAAACTACTGGAAATGTGTGAATCGTCTTGTATGTGAAGGGG
ATCTAAACTCTGCATATATGGAAGCGTTGTGTTCCGGTGATAAACTTATT
CTCGTTGAGCTTCTGAATAAAACTGGTCCAGTTATAGAAAGCTTGTCAGT
GAAAACTGTCAATGTTCTTCTTAATACTTTAGCACCATATCTTCTGCAAG
GAAAGTTTTTTA
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