FG537817

EST Overview
NameFG537817
Unique NameFG537817
TypeEST
OrganismPisum sativum (pea)
Sequence length421
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v2Pisum sativum unigene v2EST
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
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BLAST of FG537817 vs. TrEMBL
Match: B9H468_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_759960 PE=4 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 9.525e-7
Identity = 28/32 (87.50%), Postives = 28/32 (87.50%), Query Frame = 2 
Query:    2 IPQTQEKIEHYLSVSKPKLNKLVQAYVEKHQK 97
            IP TQEKIE YLSVSKPKL KLVQAYVEK QK
Sbjct:  825 IPTTQEKIEQYLSVSKPKLTKLVQAYVEKFQK 856
[Close]
BLAST of FG537817 vs. SwissProt
Match: C3H38_ARATH (Zinc finger CCCH domain-containing protein 38 OS=Arabidopsis thaliana GN=At3g18640 PE=1 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 2.950e-7
Identity = 25/32 (78.12%), Postives = 28/32 (87.50%), Query Frame = 2 
Query:    2 IPQTQEKIEHYLSVSKPKLNKLVQAYVEKHQK 97
            +PQTQEKI+HYLS SKPKL KLVQAYV K +K
Sbjct:  644 VPQTQEKIDHYLSASKPKLTKLVQAYVGKIKK 675
[Close]
BLAST of FG537817 vs. TAIR peptide
Match: AT3G18640.1 (| Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr3:6413617-6415829 REVERSE LENGTH=676)

HSP 1 Score: 53.9138 bits (128), Expect = 3.699e-8
Identity = 25/32 (78.12%), Postives = 28/32 (87.50%), Query Frame = 2 
Query:    2 IPQTQEKIEHYLSVSKPKLNKLVQAYVEKHQK 97
            +PQTQEKI+HYLS SKPKL KLVQAYV K +K
Sbjct:  644 VPQTQEKIDHYLSASKPKLTKLVQAYVGKIKK 675
[Close]
BLAST of FG537817 vs. TAIR peptide
Match: AT3G18640.1 (| Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr3:6413617-6415829 REVERSE LENGTH=676)

HSP 1 Score: 53.9138 bits (128), Expect = 3.699e-8
Identity = 25/32 (78.12%), Postives = 28/32 (87.50%), Query Frame = 2 
Query:    2 IPQTQEKIEHYLSVSKPKLNKLVQAYVEKHQK 97
            +PQTQEKI+HYLS SKPKL KLVQAYV K +K
Sbjct:  644 VPQTQEKIDHYLSASKPKLTKLVQAYVGKIKK 675
[Close]
BLAST of FG537817 vs. Soybean peptides
Match: Glyma06g15720.1|PACid:16263094 ()

HSP 1 Score: 62.003 bits (149), Expect = 1.980e-10
Identity = 30/33 (90.91%), Postives = 31/33 (93.94%), Query Frame = 2 
Query:    2 IPQTQEKIEHYLSVSKPKLNKLVQAYVEKHQKA 100
            IPQTQEKI+HYLS SKPKLNKLVQAYVEK QKA
Sbjct:  796 IPQTQEKIDHYLSFSKPKLNKLVQAYVEKVQKA 828
[Close]
BLAST of FG537817 vs. Soybean peptides
Match: Glyma04g39220.1|PACid:16257245 ()

HSP 1 Score: 62.003 bits (149), Expect = 1.980e-10
Identity = 30/33 (90.91%), Postives = 31/33 (93.94%), Query Frame = 2 
Query:    2 IPQTQEKIEHYLSVSKPKLNKLVQAYVEKHQKA 100
            IPQTQEKI+HYLS SKPKLNKLVQAYVEK QKA
Sbjct:  384 IPQTQEKIDHYLSFSKPKLNKLVQAYVEKVQKA 416
[Close]
BLAST of FG537817 vs. SwissProt
Match: C3H38_ARATH (Zinc finger CCCH domain-containing protein 38 OS=Arabidopsis thaliana GN=At3g18640 PE=1 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 3.004e-7
Identity = 25/32 (78.12%), Postives = 28/32 (87.50%), Query Frame = 2 
Query:    2 IPQTQEKIEHYLSVSKPKLNKLVQAYVEKHQK 97
            +PQTQEKI+HYLS SKPKL KLVQAYV K +K
Sbjct:  644 VPQTQEKIDHYLSASKPKLTKLVQAYVGKIKK 675
[Close]
BLAST of FG537817 vs. Medicago proteins
Match: IMGA|Medtr8g093480.1 (Zinc finger CCCH domain-containing protein 38 (AHRD V1 *-*- Q9LIH5); contains Interpro domain(s) IPR000571 Zinc finger, CCCH-type chr08_pseudomolecule_IMGAG_V3.5 26789984-26795525 F EGN_Mt100125 20100825)

HSP 1 Score: 58.9214 bits (141), Expect = 1.019e-9
Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 2 
Query:    2 IPQTQEKIEHYLSVSKPKLNKLVQAYVEKHQKA 100
            IPQT+EKIE YLSVSKPK+NKL+QAYVEK QKA
Sbjct:  747 IPQTREKIERYLSVSKPKVNKLIQAYVEKVQKA 779
[Close]
BLAST of FG537817 vs. Medicago proteins
Match: IMGA|Medtr3g095960.1 (Zinc finger CCCH domain-containing protein 38 (AHRD V1 *-*- Q9LIH5); contains Interpro domain(s) IPR000571 Zinc finger, CCCH-type chr03_pseudomolecule_IMGAG_V3.5 33061387-33070390 E EGN_Mt100125 20100825)

HSP 1 Score: 57.3806 bits (137), Expect = 2.964e-9
Identity = 28/32 (87.50%), Postives = 29/32 (90.62%), Query Frame = 2 
Query:    2 IPQTQEKIEHYLSVSKPKLNKLVQAYVEKHQK 97
            IPQTQEKI+ YLS SKPKLNKLVQAYVEK QK
Sbjct:  984 IPQTQEKIDQYLSFSKPKLNKLVQAYVEKVQK 1015
The following BLAST results are available for this feature:
BLAST of FG537817 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
B9H468_POPTR9.525e-787.50Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of FG537817 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
C3H38_ARATH2.950e-778.13Zinc finger CCCH domain-containing protein 38 OS=A... [more]
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BLAST of FG537817 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G18640.13.699e-878.13| Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fa... [more]
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BLAST of FG537817 vs. TAIR peptide
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G18640.13.699e-878.13| Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fa... [more]
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BLAST of FG537817 vs. Soybean peptides
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides)
Total hits: 2
Match NameE-valueIdentityDescription
Glyma06g15720.1|PACid:162630941.980e-1090.91[more]
Glyma04g39220.1|PACid:162572451.980e-1090.91[more]
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BLAST of FG537817 vs. SwissProt
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
C3H38_ARATH3.004e-778.13Zinc finger CCCH domain-containing protein 38 OS=A... [more]
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BLAST of FG537817 vs. Medicago proteins
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins)
Total hits: 2
Match NameE-valueIdentityDescription
IMGA|Medtr8g093480.11.019e-984.85Zinc finger CCCH domain-containing protein 38 (AHR... [more]
IMGA|Medtr3g095960.12.964e-987.50Zinc finger CCCH domain-containing protein 38 (AHR... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v2
Date Performed: 2011-04-27
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 20..38
score

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 20..38
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v2
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG537817 ID=FG537817; Name=FG537817; organism=Pisum sativum; type=EST; length=421bp
TATACCTCAGACACAAGAGAAAATTGAACACTATTTATCAGTTTCGAAAC
CAAAGCTTAACAAACTTGTACAGGCTTATGTGGAAAAGCATCAGAAGGCC
TAATGCAAGTGTTGAAAGTTGGTTATGTAATATATTTTGCTATAGTAGTA
TATTATTATTACCATATTTATGTTTGTCTGTTGCAAGAAGTTTTATGCAA
TGCTCTCTCTAGATAACCGGCTGATGTATAATTGATAAATCAAGCAGCTG
TTGTATAAATATAAATTATGTGCCGTTTTTTTAGGAAGCTAGTGTTGTTG
TGCTAACATTAGTTTACAACCCCCAACATTAGGCAACTGTAATTTTTGCT
ACCTGTTTGATACAATTGAGGAAATCTCCATATTATAACTAAACTCATGT
ACGCAGTGTTTCATTCATCTC
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