FG538395

EST Overview
NameFG538395
Unique NameFG538395
TypeEST
OrganismPisum sativum (pea)
Sequence length535
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of FG538395 vs. TrEMBL
Match: A5BWU1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005005 PE=4 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 4.889e-50
Identity = 93/125 (74.40%), Postives = 108/125 (86.40%), Query Frame = 1
Query:    1 RTPSWENMAVGLREGWTGSSVVVYGHLFVVSELERMKLKVYDAETDLWEAIDGPPLPEQICKPFAVNACDSQIYVVGRNLQVAVGHITKLNRKESREDKWNFVVQWRVIDAPKSLSDLTPSSSQV 375
            RT +WENMA GLREGWTGSSVVVYGHLFVVSE ERMKLKVYD E+D WE ++GP LPEQICKPF+VNACD +IYVVGRNL VAVGHI +LN+K + E  W+F V+W V+DAP++ +DLTPSSSQV
Sbjct:  278 RTNNWENMAAGLREGWTGSSVVVYGHLFVVSEHERMKLKVYDMESDNWETVEGPALPEQICKPFSVNACDCKIYVVGRNLHVAVGHIWRLNQKGNCEKNWSFGVRWHVVDAPEAFADLTPSSSQV 402          
BLAST of FG538395 vs. TrEMBL
Match: B9S0Z8_RICCO (Protein AFR, putative OS=Ricinus communis GN=RCOM_0632280 PE=4 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 8.339e-50
Identity = 95/125 (76.00%), Postives = 103/125 (82.40%), Query Frame = 1
Query:    1 RTPSWENMAVGLREGWTGSSVVVYGHLFVVSELERMKLKVYDAETDLWEAIDGPPLPEQICKPFAVNACDSQIYVVGRNLQVAVGHITKLNRKESREDKWNFVVQWRVIDAPKSLSDLTPSSSQV 375
            RT  WENMAVGLREGWTGSSVVVYG LFVVSELERMKLKVYD + D WE I+GPPLPEQICKPFAVNACD +IYVVGRNL VAVGHITKL +  +   +W+F V W V+D P   SDLTPSSSQV
Sbjct:  338 RTDRWENMAVGLREGWTGSSVVVYGRLFVVSELERMKLKVYDMDNDSWETIEGPPLPEQICKPFAVNACDCKIYVVGRNLHVAVGHITKLKQNTTCGKRWSFSVTWHVVDPPDIFSDLTPSSSQV 462          
BLAST of FG538395 vs. TrEMBL
Match: B9HAA6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_561242 PE=4 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 6.607e-47
Identity = 92/125 (73.60%), Postives = 101/125 (80.80%), Query Frame = 1
Query:    1 RTPSWENMAVGLREGWTGSSVVVYGHLFVVSELERMKLKVYDAETDLWEAIDGPPLPEQICKPFAVNACDSQIYVVGRNLQVAVGHITKLNRKESREDKWNFVVQWRVIDAPKSLSDLTPSSSQV 375
            RT  WENMA GLREGWTGSSVVVYG LFVVS+LERMKLKVYDAE+D WE I+G PLPEQI KPFAVNA D +IYVVGRNL V VGHI++L +K   E KW F V+W V+D P S  DLTPSSSQV
Sbjct:  278 RTDKWENMAFGLREGWTGSSVVVYGRLFVVSDLERMKLKVYDAESDSWETIEGSPLPEQISKPFAVNAWDCKIYVVGRNLHVVVGHISRLQQKGICEKKWGFSVRWHVVDPPDSFCDLTPSSSQV 402          
BLAST of FG538395 vs. TrEMBL
Match: D7KEQ4_ARALY (Kelch repeat-containing F-box family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_473227 PE=4 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.804e-36
Identity = 72/125 (57.60%), Postives = 95/125 (76.00%), Query Frame = 1
Query:    1 RTPSWENMAVGLREGWTGSSVVVYGHLFVVSELERMKLKVYDAETDLWEAIDGPPLPEQICKPFAVNACDSQIYVVGRNLQVAVGHITKLNRKESREDKWNFVVQWRVIDAPKSLSDLTPSSSQV 375
            RT  WE M++GLREGWTG+SVV+Y  LF+VSELERMK+KVYD  TD WE I+GP LPEQIC+PFAVN   +++YVVGRNL +AVG+I +   K        F V+W V+++P+  +D+TPS+SQ+
Sbjct:  279 RTDQWETMSMGLREGWTGTSVVIYDRLFIVSELERMKMKVYDPVTDSWETINGPELPEQICRPFAVNCYGNRVYVVGRNLHLAVGNIWQSENK--------FGVRWEVVESPERYADITPSNSQI 395          
BLAST of FG538395 vs. TrEMBL
Match: C5X9L1_SORBI (Putative uncharacterized protein Sb02g003160 OS=Sorghum bicolor GN=Sb02g003160 PE=4 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 5.802e-35
Identity = 69/121 (57.02%), Postives = 89/121 (73.55%), Query Frame = 1
Query:   13 WENMAVGLREGWTGSSVVVYGHLFVVSELERMKLKVYDAETDLWEAIDGPPLPEQICKPFAVNACDSQIYVVGRNLQVAVGHITKLNRKESREDKWNFVVQWRVIDAPKSLSDLTPSSSQV 375
            WE M VG+REGWTG SVV+ G LFV+SE ERMK+KVYDAE D W+++ GPP+PE+I KPF+V+  DS+I VVGR L VA+GH+ K    +       + + W+ +DAPK  SDLTPSSSQ+
Sbjct:  291 WEVMPVGMREGWTGLSVVIEGRLFVISEYERMKVKVYDAEADSWDSVSGPPMPERIMKPFSVSCLDSKIVVVGRGLHVAIGHVQKEPAGDPDSRSSGYSICWQDVDAPKEFSDLTPSSSQI 411          
BLAST of FG538395 vs. TrEMBL
Match: D7TK91_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021505001 PE=4 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.205e-34
Identity = 69/84 (82.14%), Postives = 75/84 (89.29%), Query Frame = 1
Query:    1 RTPSWENMAVGLREGWTGSSVVVYGHLFVVSELERMKLKVYDAETDLWEAIDGPPLPEQICKPFAVNACDSQIYVVGRNLQVAV 252
            RT +WENMA GLREGWTGSSVVVYGHLFVVSE ERMKLKVYD E+D WE ++GP LPEQICKPF+VNACD +IYVVGRNL VAV
Sbjct:  288 RTNNWENMAAGLREGWTGSSVVVYGHLFVVSEHERMKLKVYDMESDNWETVEGPALPEQICKPFSVNACDCKIYVVGRNLHVAV 371          
BLAST of FG538395 vs. TrEMBL
Match: Q69NY4_ORYSJ (Kelch repeat containing F-box protein family-like OS=Oryza sativa subsp. japonica GN=OSJNBb0050B07.8 PE=4 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.094e-33
Identity = 64/121 (52.89%), Postives = 89/121 (73.55%), Query Frame = 1
Query:   13 WENMAVGLREGWTGSSVVVYGHLFVVSELERMKLKVYDAETDLWEAIDGPPLPEQICKPFAVNACDSQIYVVGRNLQVAVGHITKLNRKESREDKWNFVVQWRVIDAPKSLSDLTPSSSQV 375
            WE M VG+REGWTG SVV+  HLFV+SE ERMK+KVYD ETD W+++ GPP+PE+I KPF+V+  +++I VVGR L VA+GH+ K           ++++QW+ +D P+   DLTPS+SQ+
Sbjct:  283 WEVMPVGMREGWTGLSVVIDKHLFVISEYERMKVKVYDPETDSWDSVKGPPMPERIMKPFSVSCLENKIVVVGRGLHVAIGHVKKQPGSHPDSRSSSYLIQWQDVDVPREFGDLTPSNSQI 403          
BLAST of FG538395 vs. TrEMBL
Match: A3BGP0_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_23130 PE=4 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.094e-33
Identity = 64/121 (52.89%), Postives = 89/121 (73.55%), Query Frame = 1
Query:   13 WENMAVGLREGWTGSSVVVYGHLFVVSELERMKLKVYDAETDLWEAIDGPPLPEQICKPFAVNACDSQIYVVGRNLQVAVGHITKLNRKESREDKWNFVVQWRVIDAPKSLSDLTPSSSQV 375
            WE M VG+REGWTG SVV+  HLFV+SE ERMK+KVYD ETD W+++ GPP+PE+I KPF+V+  +++I VVGR L VA+GH+ K           ++++QW+ +D P+   DLTPS+SQ+
Sbjct:  392 WEVMPVGMREGWTGLSVVIDKHLFVISEYERMKVKVYDPETDSWDSVKGPPMPERIMKPFSVSCLENKIVVVGRGLHVAIGHVKKQPGSHPDSRSSSYLIQWQDVDVPREFGDLTPSNSQI 512          
BLAST of FG538395 vs. TrEMBL
Match: A2YI96_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24933 PE=4 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.094e-33
Identity = 64/121 (52.89%), Postives = 89/121 (73.55%), Query Frame = 1
Query:   13 WENMAVGLREGWTGSSVVVYGHLFVVSELERMKLKVYDAETDLWEAIDGPPLPEQICKPFAVNACDSQIYVVGRNLQVAVGHITKLNRKESREDKWNFVVQWRVIDAPKSLSDLTPSSSQV 375
            WE M VG+REGWTG SVV+  HLFV+SE ERMK+KVYD ETD W+++ GPP+PE+I KPF+V+  +++I VVGR L VA+GH+ K           ++++QW+ +D P+   DLTPS+SQ+
Sbjct:  392 WEVMPVGMREGWTGLSVVIDKHLFVISEYERMKVKVYDPETDSWDSVKGPPMPERIMKPFSVSCLENKIVVVGRGLHVAIGHVKKQPGSHPDSRSSSYLIQWQDVDVPREFGDLTPSNSQI 512          
BLAST of FG538395 vs. TrEMBL
Match: C0P3Z3_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.695e-32
Identity = 70/127 (55.12%), Postives = 86/127 (67.72%), Query Frame = 1
Query:    1 RTPSWENMAVGLREGWTGSSVVVYGHLFVVSELERMKLKVYDAETDLWEAIDGPPLPEQICKPFAVNACDSQIYVVGRNLQVAVGHITK--LNRKESREDKWNFVVQWRVIDAPKSLSDLTPSSSQV 375
            R   WE M  G+REGWTG SVVV G LFVVSE ERMK+KVYD ETD W+ + G P+PE+I KPF+V+  DS+I VVGR L VA+GH+ +              + V W+ +DAPK  SDLTPSSSQ+
Sbjct:  281 RADRWEAMPAGMREGWTGLSVVVAGRLFVVSEYERMKVKVYDPETDSWDTVGGAPMPERIMKPFSVSCVDSRIVVVGRGLHVAIGHVREEPAGGGPGSRGAPGYSVCWQDVDAPKEFSDLTPSSSQI 407          
BLAST of FG538395 vs. SwissProt
Match: FBK17_ARATH (F-box/kelch-repeat protein At1g30090 OS=Arabidopsis thaliana GN=At1g30090 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 6.153e-38
Identity = 72/125 (57.60%), Postives = 95/125 (76.00%), Query Frame = 1
Query:    1 RTPSWENMAVGLREGWTGSSVVVYGHLFVVSELERMKLKVYDAETDLWEAIDGPPLPEQICKPFAVNACDSQIYVVGRNLQVAVGHITKLNRKESREDKWNFVVQWRVIDAPKSLSDLTPSSSQV 375
            RT  WE M++GLREGWTG+SVV+Y  LF+VSELERMK+KVYD  TD WE I+GP LPEQIC+PFAVN   +++YVVGRNL +AVG+I +   K        F V+W V+++P+  +D+TPS+SQ+
Sbjct:  279 RTDQWETMSMGLREGWTGTSVVIYDRLFIVSELERMKMKVYDPVTDSWETINGPELPEQICRPFAVNCYGNRVYVVGRNLHLAVGNIWQSENK--------FAVRWEVVESPERYADITPSNSQI 395          
BLAST of FG538395 vs. SwissProt
Match: AFR_ARATH (F-box protein AFR OS=Arabidopsis thaliana GN=AFR PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 9.236e-18
Identity = 45/123 (36.59%), Postives = 70/123 (56.91%), Query Frame = 1
Query:   10 SWENMAVGLREGWTGSSVVVYGHLFVVSELERMKLKVYDAETDLWEAIDGPPLP-EQICKPFAVNACDSQIYVVGRNLQVAVGHITKLNRKESREDKWNFVVQWRVIDAPKSLSDLTPSSSQV 375
            +W  M+ G++EGWTG SVV+   LFV+SE     +KVY ++ D W  + G  L  E++ +PFAV   D +++VV   + VA G +       S     +F V+WR++ +PKS    +P+S  V
Sbjct:  254 TWREMSGGMKEGWTGVSVVIRDRLFVISEHGDFPMKVYCSDDDTWRYVSGEKLQGEKMRRPFAVTGADDRVFVVASGINVAEGRV-------SEGQNGDFSVEWRMVSSPKSSIQFSPASCHV 369          
BLAST of FG538395 vs. TAIR peptide
Match: AT1G30090.1 (| Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr1:10559746-10560942 REVERSE LENGTH=398)

HSP 1 Score: 156.762 bits (395), Expect = 6.722e-39
Identity = 72/125 (57.60%), Postives = 95/125 (76.00%), Query Frame = 1
Query:    1 RTPSWENMAVGLREGWTGSSVVVYGHLFVVSELERMKLKVYDAETDLWEAIDGPPLPEQICKPFAVNACDSQIYVVGRNLQVAVGHITKLNRKESREDKWNFVVQWRVIDAPKSLSDLTPSSSQV 375
            RT  WE M++GLREGWTG+SVV+Y  LF+VSELERMK+KVYD  TD WE I+GP LPEQIC+PFAVN   +++YVVGRNL +AVG+I +   K        F V+W V+++P+  +D+TPS+SQ+
Sbjct:  279 RTDQWETMSMGLREGWTGTSVVIYDRLFIVSELERMKMKVYDPVTDSWETINGPELPEQICRPFAVNCYGNRVYVVGRNLHLAVGNIWQSENK--------FAVRWEVVESPERYADITPSNSQI 395          
BLAST of FG538395 vs. TAIR peptide
Match: AT2G24540.1 (| Symbols: AFR | Galactose oxidase/kelch repeat superfamily protein | chr2:10426414-10427532 FORWARD LENGTH=372)

HSP 1 Score: 89.7373 bits (221), Expect = 1.009e-18
Identity = 45/123 (36.59%), Postives = 70/123 (56.91%), Query Frame = 1
Query:   10 SWENMAVGLREGWTGSSVVVYGHLFVVSELERMKLKVYDAETDLWEAIDGPPLP-EQICKPFAVNACDSQIYVVGRNLQVAVGHITKLNRKESREDKWNFVVQWRVIDAPKSLSDLTPSSSQV 375
            +W  M+ G++EGWTG SVV+   LFV+SE     +KVY ++ D W  + G  L  E++ +PFAV   D +++VV   + VA G +       S     +F V+WR++ +PKS    +P+S  V
Sbjct:  254 TWREMSGGMKEGWTGVSVVIRDRLFVISEHGDFPMKVYCSDDDTWRYVSGEKLQGEKMRRPFAVTGADDRVFVVASGINVAEGRV-------SEGQNGDFSVEWRMVSSPKSSIQFSPASCHV 369          
The following BLAST results are available for this feature:
BLAST of FG538395 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
A5BWU1_VITVI4.889e-5074.40Putative uncharacterized protein OS=Vitis vinifera... [more]
B9S0Z8_RICCO8.339e-5076.00Protein AFR, putative OS=Ricinus communis GN=RCOM_... [more]
B9HAA6_POPTR6.607e-4773.60Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7KEQ4_ARALY1.804e-3657.60Kelch repeat-containing F-box family protein OS=Ar... [more]
C5X9L1_SORBI5.802e-3557.02Putative uncharacterized protein Sb02g003160 OS=So... [more]
D7TK91_VITVI2.205e-3482.14Whole genome shotgun sequence of line PN40024, sca... [more]
Q69NY4_ORYSJ1.094e-3352.89Kelch repeat containing F-box protein family-like ... [more]
A3BGP0_ORYSJ1.094e-3352.89Putative uncharacterized protein OS=Oryza sativa s... [more]
A2YI96_ORYSI1.094e-3352.89Putative uncharacterized protein OS=Oryza sativa s... [more]
C0P3Z3_MAIZE2.695e-3255.12Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
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BLAST of FG538395 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
FBK17_ARATH6.153e-3857.60F-box/kelch-repeat protein At1g30090 OS=Arabidopsi... [more]
AFR_ARATH9.236e-1836.59F-box protein AFR OS=Arabidopsis thaliana GN=AFR P... [more]
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BLAST of FG538395 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G30090.16.722e-3957.60| Symbols: | Galactose oxidase/kelch repeat super... [more]
AT2G24540.11.009e-1836.59| Symbols: AFR | Galactose oxidase/kelch repeat su... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015915Kelch-type beta propellerGENE3D2.120.10.80no descriptioncoord: 2..102
score: 3.4
NoneNo IPR availableSUPERFAMILY117281Kelch motifcoord: 1..77
score: 4.3

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG538395 ID=FG538395; Name=FG538395; organism=Pisum sativum; type=EST; length=535bp
AGAACACCTTCTTGGGAAAATATGGCGGTTGGACTTAGAGAAGGGTGGAC
TGGTTCAAGCGTGGTAGTTTACGGCCACTTATTCGTCGTTTCAGAGCTCG
AAAGAATGAAACTAAAGGTTTATGACGCGGAAACTGATTTATGGGAAGCC
ATCGACGGCCCTCCTTTACCTGAGCAAATATGCAAACCTTTTGCCGTGAA
TGCGTGCGATTCTCAAATCTACGTCGTTGGCCGAAATCTTCAGGTTGCTG
TCGGTCATATCACTAAACTAAACCGAAAAGAAAGCCGCGAGGATAAATGG
AACTTCGTTGTTCAATGGCGTGTAATTGACGCGCCGAAAAGTTTATCTGA
TCTTACTCCTTCAAGCTCTCAGGTGCTATTTGCATAGTTTTTTTTCCTCT
TATTATTCTGTAATATCATGTTATAATGTTGTTTAAATGAAATGTAAATT
AAATATAGTTATTAGAAGTTTTAATGTTTGTAATAGCTCTGTGAAGGTAA
ATTTAAGCAGTTTTTGAGCTGTATCAGAGAATAGC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller