FG538434

EST Overview
NameFG538434
Unique NameFG538434
TypeEST
OrganismPisum sativum (pea)
Sequence length634
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of FG538434 vs. TrEMBL
Match: D7U675_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_114.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00012543001 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.895e-8
Identity = 42/103 (40.78%), Postives = 56/103 (54.37%), Query Frame = 3
Query:   93 KKEIPATK--QRTYDNTVASQKASS-DIVETKA----------------TAESDRAGGEIPQSSSRLKEVQKEWTCALCLVTTSSEATLFSHLKGKKHMASCE 344
            KKEI  T+  QRT+  T    K +  ++ ETK+                TAE +    +     S  K+VQKEW CA+CL+TT SEATL SHL+GK+H A+ E
Sbjct:  215 KKEIKVTEVTQRTFGGTAHWVKQTELNLGETKSNTTCIAGIKERATALMTAEIEACRDDRTPEISLHKKVQKEWACAVCLLTTQSEATLNSHLQGKRHQATSE 317          
BLAST of FG538434 vs. TrEMBL
Match: B9MWW2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_826972 PE=4 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 3.574e-7
Identity = 40/116 (34.48%), Postives = 60/116 (51.72%), Query Frame = 3
Query:    9 EILATDDKEMLKTNGDQRLQTEHRDIK--EKKEIPATKQ--RTYDNTVASQKASSDIVETKATAESDRAGGEIPQSSSRLKEVQKEWTCALCLVTTSSEATLFSHLKGKKHMASCE 344
            EI A + +++LK         +  D++  EK E+ +TKQ  +   N   ++  +   +E   TA +   GG++       K VQK WTC +C VT  SE  L SHL GK+H A+CE
Sbjct:  205 EIRAVEAEDLLKFEQLPVRFEDSNDVETTEKIEVASTKQARQAESNVNQTENRTFPPLECINTATTTVGGGDLCGILPPEK-VQKVWTCVICQVTAQSETALISHLHGKRHKATCE 319          
BLAST of FG538434 vs. TrEMBL
Match: B9GH74_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_815476 PE=4 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 6.096e-7
Identity = 41/124 (33.06%), Postives = 60/124 (48.39%), Query Frame = 3
Query:    3 TNEILATDDKEMLKTNG----DQRLQTEHRD-----IKEKKEIPATKQ-RTYDNTVASQKASSDIVETKATAESDRAGGEIPQSSSRLKEVQKEWTCALCLVTTSSEATLFSHLKGKKHMASCE 344
            +N +  T++KE+  T        +L    RD     I EKKE+ +T Q R  +  +   +  +       T  ++  GG         ++VQK WTCALC VT  SE  L SHL+GK+H A+ E
Sbjct:  200 SNAVEITEEKEVASTTQLKFEQPKLPVLPRDSNAVEITEKKEVSSTNQVRQIEPNIGQTENRTFQPLKNITTAAEAIGGRDLYEILPPEKVQKVWTCALCQVTAQSETVLNSHLQGKRHKAARE 323          
BLAST of FG538434 vs. TrEMBL
Match: B9HN84_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_767781 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 7.961e-7
Identity = 39/131 (29.77%), Postives = 65/131 (49.62%), Query Frame = 3
Query:    3 TNEILATDDKEMLKTNGDQRLQTEH------------RDIKEKKEIPATKQ-RTYDNTVASQKASS----DIVETKATAESDRAGGEIPQSSSRLKEVQKEWTCALCLVTTSSEATLFSHLKGKKHMASCE 344
            +N +  T+ KE+ +     +L+ E              +I EK+E+ +TKQ R  ++ ++  + S+    + + T  T E  R   EI       ++V   WTCA+C +T  SE  L SHL+G +H A+CE
Sbjct:  215 SNAVEVTEKKEVKEVASTAQLKFEQPKLPVLFKDSNAAEITEKREVTSTKQVRQVESNISQTENSTFPPLEFINTVTTTEGGRDLCEILPP----EKVLNVWTCAICQMTVQSETVLNSHLQGNRHKAACE 341          
The following BLAST results are available for this feature:
BLAST of FG538434 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
D7U675_VITVI1.895e-840.78Whole genome shotgun sequence of line PN40024, sca... [more]
B9MWW2_POPTR3.574e-734.48Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9GH74_POPTR6.096e-733.06Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9HN84_POPTR7.961e-729.77Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 115..129
score
NoneNo IPR availableSEGsegsegcoord: 35..51
score
NoneNo IPR availableSEGsegsegcoord: 2..17
score
NoneNo IPR availableSEGsegsegcoord: 17..32
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG538434 ID=FG538434; Name=FG538434; organism=Pisum sativum; type=EST; length=634bp
ATACAAATGAAATCTTAGCTACGGATGATAAAGAAATGCTAAAGACAAAT
GGAGATCAAAGACTCCAAACAGAACATAGAGACATCAAAGAGAAAAAAGA
AATCCCTGCAACCAAGCAAAGAACCTATGATAATACTGTGGCAAGTCAAA
AGGCATCATCAGACATAGTAGAAACCAAAGCAACAGCAGAGAGTGACAGA
GCTGGGGGAGAGATTCCTCAAAGTTCTTCAAGACTGAAGGAAGTGCAGAA
AGAGTGGACTTGTGCTTTATGTTTGGTAACAACATCGAGCGAGGCAACTT
TGTTTTCCCACCTCAAAGGGAAGAAACACATGGCTAGTTGTGAAGCAGCT
TTGAAAGCGAAGAAGCAAGCTGCTCTGCAGAAGCTGAAAATCTATCAGCC
CAAAGAGGAGGTGAAACAGAAGAATGTTAACAATATGTTAAATTCGAAGG
TCAAGAATGGGAGATGGTAATGTTAACAAAGAAGAGGAGGTGAAACAGAA
GAATGTTAACAATGTGTTAAATTCCAAGGTCAAGAATGGGAGATGGTATT
GTTAACAAAGTGTTGAAGGTAGTGTTGGATAATAAGGTGGANNAACTGCA
AAAGAACATGTCTGAGCTTATTAGCATACATAAT
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